In this study, evolutionary co-variance analysis was used to build an <em>in silico </em>model for the structure of the bacterial O-antigen modifying acetyltransferase protein, OafB. This model was subjected to molecular dynamics simulations to assess its stability, dynamics, and interactions with the putative acetyl donor substrate, acetyl coenzyme-A, and O-antigen acceptor substrate. Files deposited here are the trajectories (without water, every 10th frame) and run input files from the molecular dynamics simulations presented in this work.
Preprint: https://www.biorxiv.org/content/10.1101/2022.06.30.498268
External deposit with Zenodo
Date made available | 30 Jun 2022 |
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Publisher | Zenodo |
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