The York Research Database

Genome integration and excision by a new Streptomyces bacteriophage, ϕJoe

Fogg, P. C. M., Haley, J. A., Stark, W. M. & Smith, M. C. M., 15 Feb 2017

Article in Applied and Environmental Microbiology

Optical sensing of microbial life on surfaces

Fischer, M., Triggs, G. J. & Krauss, T. F., Mar 2016

Article in Applied and Environmental Microbiology

Multiplexed integrating plasmids for engineering the erythromycin gene cluster for expression in Streptomyces and combinatorial biosynthesis

Fayed, B., Ashford, D. A., Hashem, A. M., Amin, M. A., El Gazayerly, O. N., Gregory, M. A. & Smith, M. C. M., Dec 2015

Article in Applied and Environmental Microbiology

The mannitol utilization system of the marine bacterium Zobellia galactanivorans

Groisillier, A., Labourel, A., Michel, G. & Tonon, T., Mar 2015

Article in Applied and Environmental Microbiology

C/N ratio drives soil actinobacterial cellobiohydrolase gene diversity

de Menezes, A. B., Prendergast-Miller, M. T., Poonpatana, P., Farrell, M., Bissett, A., Macdonald, L. M., Toscas, P., Richardson, A. E. & Thrall, P. H., 2015

Article in Applied and Environmental Microbiology

Analysis of the xplAB-containing gene cluster involved in the bacterial degradation of the explosive hexahydro-1,3,5-trinitro-1,3,5-triazine

Chong, C., Sabir, D. K., Lorenz, A., Bontemps, C., Andeer, P., Stahl, D. A., Strand, S. E., Rylott, L. & Bruce, N. C., Nov 2014

Article in Applied and Environmental Microbiology

Effects of sequential and simultaneous applications of bacteriophages on populations of Pseudomonas aeruginosa in vitro and in wax moth larvae

Hall, A. R., De Vos, D., Friman, V-P., Pirnay, J-P. & Buckling, A., Aug 2012

Article in Applied and Environmental Microbiology

Local Adaptation to Soil Hypoxia Determines the Structure of an Arbuscular Mycorrhizal Fungal Community in Roots from Natural CO2 Springs

Macek, I., Dumbrell, A. J., Nelson, M., Fitter, A. H., Vodnik, D. & Helgason, T., Jul 2011

Article in Applied and Environmental Microbiology

Shuttle vector system for Methanococcus maripaludis with improved transformation efficiency

Walters, A. D., Smith, S. E. & Chong, J. P. J., Apr 2011

Article in Applied and Environmental Microbiology

Integron Prevalence and Diversity in Manured Soil

Byrne-Bailey, K. G., Gaze, W. H., Zhang, L., Kay, P., Boxall, A., Hawkey, P. M. & Wellington, E. M. H., Jan 2011

Article in Applied and Environmental Microbiology

Effect of Pesticide Inoculation, Duration of Composting, and Degradation Time on the Content of Compost Fatty Acids, Quantified Using Two Methods

Cardinali, A., Otto, S., Vischetti, C., Brown, C. & Zanin, G., Oct 2010

Article in Applied and Environmental Microbiology

Evolutionary dynamics of insertion sequences in relation to the evolutionary histories of the chromosome and symbiotic plasmid genes of Rhizobium etli populations

Lozano, L., Hernandez-Gonzalez, I., Bustos, P., Santamaria, R. I., Souza, V., Young, J. P. W., Davila, G. & Gonzalez, V., Oct 2010

Article in Applied and Environmental Microbiology

High-throughput method for rapid induction of prophages from lysogens and its application in the study of Shiga Toxin-encoding Escherichia coli strains

McDonald, J. E., Smith, D. L., Fogg, P. C. M., McCarthy, A. J. & Allison, H. E., Apr 2010

Article in Applied and Environmental Microbiology

Deformed wing virus implicated in overwintering honeybee colony losses

Highfield, A. C., El Nagar, A., Mackinder, L. C. M., Noël, L. M. L. J., Hall, M. J. & Schroeder, D. C., Nov 2009

Article in Applied and Environmental Microbiology

Lateral Transfer of Genes for Hexahydro-1,3,5-Trinitro-1,3,5-Triazine (RDX) Degradation

Andeer, P. F., Stahl, D. A., Bruce, N. C. & Strand, S. E., 15 May 2009

Article in Applied and Environmental Microbiology

The explosive-degrading cytochrome P450 system is highly conserved among strains of Rhodococcus spp.

Seth-Smith, H. M. B., Edwards, J., Rosser, S. J., Rathbone, D. A. & Bruce, N. C., Jul 2008

Article in Applied and Environmental Microbiology

Multilocus characterization scheme for shiga toxin-encoding bacteriophages

Smith, D. L., Wareing, B. M., Fogg, P. C. M., Riley, L. M., Spencer, M., Cox, M. J., Saunders, J. R., McCarthy, A. J. & Allison, H. E., Dec 2007

Article in Applied and Environmental Microbiology

Proof that Burkholderia strains form effective symbioses with legumes: a study of novel mimosa-nodulating strains from South America

Chen, W. M., de Faria, S. M., Straliotto, R., Pitard, R. M., Simoes-Araujo, J. L., Chou, J. F., Chou, Y. J., Barrios, E., Prescott, A. R., Elliott, G. N., Sprent, J. I., Young, J. P. W. & James, E. K., Nov 2005

Article in Applied and Environmental Microbiology

Nonlegumes, legumes, and root nodules harbor different arbuscular mycorrhizal fungal communities

Scheublin, T. R., Ridgway, K. P., Young, J. P. W. & van der Heijden, M. G. A., Oct 2004

Article in Applied and Environmental Microbiology

Acquisition of an Agrobacterium Ri Plasmid and Pathogenicity by Other -Proteobacteria in Cucumber and Tomato Crops Affected by Root Mat

Weller, S. A., Stead, D. E. & Young, J. P. W., 2004

Article in Applied and Environmental Microbiology

Biotransformation of explosives by the old yellow enzyme family of flavoproteins

Williams, R. E., Rathbone, D. A., Bruce, N. C. & Scrutton, N. S., 2004

Article in Applied and Environmental Microbiology

Diversity of bacteria associated with natural aphid populations

Haynes, S., Daniell, T. J., Webster, G., van Veen, F. J. F., Godfray, H. C. J., Darby, A. C., Prosser, J. I. & Douglas, A. E., 2003

Article in Applied and Environmental Microbiology

Elucidation of the transmission patterns of an insect-borne bacterium

Darby, A. C. & Douglas, A. E., 2003

Article in Applied and Environmental Microbiology

Symbiotic and genetic diversity of Rhizobium galegae isolates collected from the Galega orientalis gene center in the Caucasus

Andronov, E. E., Roumiantseva, M. L., Dzyubenko, N. I., Onichtchouk, O. P., Kurchak, O. N., Dresler-Nurmi, A., Young, J. P. W., Simarov, B. V., Terefework, Z. & Lindstrom, K., 2003

Article in Applied and Environmental Microbiology

Cloning, sequencing, and characterization of the hexahydro-1,3,5-trinitro-1,3,5-triazine degradation gene cluster from Rhodococcus rhodochrous

Seth-Smith, H. M. B., Rosser, S. J., Basran, A., Travis, E. R., Dabbs, E. R., Nicklin, S. & Bruce, N. C., Oct 2002

Article in Applied and Environmental Microbiology