The York Research Database

Organochlorine contamination enriches virus-encoded metabolism and pesticide degradation associated auxiliary genes in soil microbiomes

Zheng, X., Jahn, M. T., Sun, M., Friman, V-P., Balcazar, J. L., Wang, J., Shi, Y., Gong, X., Hu, F. & Zhu, Y-G., 17 Jan 2022, (E-pub ahead of print)

Article in The ISME Journal

Inter-species interactions alter antibiotic efficacy in bacterial communities

Bottery, M., Matthews, J. L., Wood, A. J., Johansen, H. K., Pitchford, J. & Friman, V-P., 9 Oct 2021, (E-pub ahead of print)

Article in The ISME Journal

Genetic identity and genotype × genotype interactions between symbionts outweigh species level effects in an insect microbiome

Smee, M., Raines, S. A. & Ferrari, J., Sep 2021

Article in The ISME Journal

Ecology and evolution of antimicrobial resistance in bacterial communities

Bottery, M. J., Pitchford, J. W. & Friman, V. P., 20 Nov 2020, (E-pub ahead of print)

Article in ISME Journal

Temporal dynamics of bacteria-plasmid coevolution under antibiotic selection

Bottery, M. J., Wood, A. J. & Brockhurst, M. A., 1 Feb 2019

Article in The ISME Journal

Defining the functional traits that drive bacterial decomposer community productivity

Evans, R., Alessi, A., Bird, S., McQueen Mason, S. J., Bruce, N. C. & Brockhurst, M. A., Jul 2017

Article in The ISME Journal

Gene mobility promotes the spread of resistance in bacterial populations

Stevenson, C., Hall, J. P., Harrison, E., Wood, A. J. & Brockhurst, M. A., 31 Mar 2017

Article in The ISME Journal

Challenges in microbial ecology: building predictive understanding of community function and dynamics

Chong, J. P. J., Widder, S., Allen, R. J., Pfeiffer, T., Curtis, T. P., Wiuf, C., Sloan, W. T., Cordero, O. X., Brown, S. P., Momeni, B., Shou, W., Kettle, H., Flint, H. J., Haas, A. F., Laroche, B., Kreft, J-U., Rainey, P. B., Freilich, S., Schuster, S., Milferstedt, K. & 11 others, van der Meer, J. R., Grosskopf, T., Huisman, J., Free, A., Picioreanu, C., Quince, C., Klapper, I., Labarthe, S., Smets, B. F., Wang, H. & Soyer, O. S., 29 Mar 2016

Literature review in The ISME Journal

Rapid evolution of microbe-mediated protection against pathogens in a worm host

King, K. C., Brockhurst, M. A., Vasieva, O., Paterson, S., Betts, A., Ford, S. A., Frost, C. L., Horsburgh, M. J., Haldenby, S. & Hurst, G. DD., 15 Mar 2016

Article in The ISME Journal

Host-microbe interactions as a driver of acclimation to salinity gradients in brown algal cultures

Dittami, S. M., Duboscq-Bidot, L., Perennou, M., Gobet, A., Gobet, A., Corre, E., Boyen, C. & Tonon, T., Jan 2016

Article in The ISME Journal

Relative importance of evolutionary dynamics depends on the composition of microbial predator-prey community

Friman, V-P., Dupont, A., Bass, D., Murrell, D. J. & Bell, T., 18 Dec 2015

Article in The ISME Journal

Lytic activity by temperate phages of Pseudomonas aeruginosa in long-term cystic fibrosis chronic lung infections

James, C. E., Davies, E. V., Fothergill, J. L., Walshaw, M. J., Beale, C. M., Brockhurst, M. A. & Winstanley, C., 2 Dec 2014

Article in The ISME Journal

Phages can constrain protist predation-driven attenuation of Pseudomonas aeruginosa virulence in multienemy communities

Friman, V-P. & Buckling, A., Sep 2014

Article in The ISME Journal

Population genomics of Sinorhizobium medicae based on low-coverage sequencing of sympatric isolates

Bailly, X., Giuntini, E., Sexton, M. C., Lower, R. P. J., Harrison, P. W., Kumar, N. & Young, J. P. W., Nov 2011

Article in The ISME Journal

Impacts of anthropogenic activity on the ecology of class 1 integrons and integron-associated genes in the environment

Gaze, W. H., Zhang, L., Abdouslam, N. A., Hawkey, P. M., Calvo-Bado, L., Royle, J., Brown, H., Davis, S., Kay, P., Boxall, A. B. A. & Wellington, E. M. H., Aug 2011

Article in The ISME Journal

Relative roles of niche and neutral processes in structuring a soil microbial community

Dumbrell, A. J., Nelson, M., Helgason, T., Dytham, C. & Fitter, A. H., 2010

Article in The ISME Journal