Zhesi He

Search results

• 2024

  Creation of rapeseed germplasm with high polyunsaturated fatty acid content by relative introgression of Brassica carinata

  Niu, Y., Li, W., Yang, Y., Wang, H., He, Z., Qin, H., Zhang, Y., Hu, D., Wang, J., Zhang, C., Yang, G., Bancroft, I. & Zou, J., 14 Nov 2024, (Accepted/In press) In: Plant Communications.

  Research output: Contribution to journal › Article › peer-review

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• 2023

  Co-expression Network Analysis of Diverse Wheat Landraces Reveals Marker of Early Thermotolerance and Candidate Master-regulator of Thermotolerance Genes

  Barratt, L., He, Z., Fellgett, A., Wang, L., McQueen Mason, S. J., Bancroft, I. & Harper, A. L., 26 Jul 2023, In: The Plant journal. 115, 3, p. 614-626 13 p.

  Research output: Contribution to journal › Article › peer-review

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• Genomics of predictive radiation mutagenesis in oilseed rape: modifying seed oil composition

  Havlickova, L., He, Z., Berger, M., Wang, L., Sandmann, G., Chew, Y. P., Yoshikawa, G. V., Lu, G., Hu, Q., Banga, S. S., Beaudoin, F. & Bancroft, I., 3 Nov 2023, (E-pub ahead of print) In: Plant biotechnology journal. 13 p.

  Research output: Contribution to journal › Article › peer-review

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• 2022

  Gene discovery and virus induced gene silencing reveal branched pathways to major classes of bioactive diterpenoids in Euphorbia peplus

  Czechowski, T., Forestier, E. C. F., Swamidatta, S., Gilday, A. D., Cording, A., Larson, T., Harvey, D., Li, Y., He, Z., King, A. J., Brown, G. D. & Graham, I. A., 18 May 2022, In: Proceedings of the National Academy of Sciences of the United States of America. 119, 21, 7 p., e2203890119.

  Research output: Contribution to journal › Article › peer-review

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• 2021

  Genome structural evolution in Brassica crops

  He, Z., Ji, R., Havlickova, L., Wang, L., Li, Y., Lee, H. T., Song, J., Koh, C., Yang, J., Zhang, M., Parkin, I. A. P., Wang, X., Edwards, D., King, G. J., Zou, J., Liu, K., Snowdon, R. J., Banga, S. S., Machackova, I. & Bancroft, I., Jun 2021, In: Nature Plants. 7, 6, p. 757-765

  Research output: Contribution to journal › Article › peer-review

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• Genomic signatures of vegetable and oilseed allopolyploid Brassica juncea and genetic loci controlling the accumulation of glucosinolates

  Bancroft, I. & He, Z., 1 Dec 2021, In: Plant biotechnology journal. 19, 12, p. 2619-2628 10 p.

  Research output: Contribution to journal › Article › peer-review

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• Validation of a novel associative transcriptomics pipeline in Brassica oleracea: Identifying candidates for vernalisation response

  Woodhouse, S., He, Z., Woolfenden, H., Steuernagel, B., Haerty, W., Bancroft, I., Irwin, J. A., Morris, R. J. & Wells, R., 13 Jul 2021, In: BMC Genomics. 22, 13 p., 539.

  Research output: Contribution to journal › Article › peer-review

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• 2020

  A high-contiguity Brassica nigra genome localizes active centromeres and defines the ancestral Brassica genome

  Sampath, P., Koh, C. S., Jin, L., Buchwaldt, M., Higgins, E. E., Zheng, C., Sankoff, D., Robinson, S. J., Kagale, S., Navabi, Z.-K., Tang, L., Horner, K. N., He, Z., Bancroft, I., Chalhoub, B., Sharpe, A. G. & Parkin, I. A. P., 10 Aug 2020, In: Nature Plants. 6, p. 929–941 13 p.

  Research output: Contribution to journal › Article › peer-review

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• Over 100 million years of enzyme evolution underpinning the production of morphine in the Papaveraceae family of flowering plants

  Li, Y., Winzer, T. H., He, Z. & Graham, I. A., 9 Mar 2020, In: Plant Communications. 1, 2, 48 p., 100029.

  Research output: Contribution to journal › Article › peer-review

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• Validation of an Associative Transcriptomics platform in the polyploid crop species Brassica juncea by dissection of the genetic architecture of agronomic and quality traits

  Harper, A. L., He, Z., Langer, S., Havlickova, L., Wang, L., Fellgett, A., Gupta, V., Pradhan, A. K. & Bancroft, I., 22 Jul 2020, (E-pub ahead of print) In: The Plant journal. p. 1-9 9 p.

  Research output: Contribution to journal › Article › peer-review

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• 2019

  Analysing the genetic architecture of clubroot resistance variation in Brassica napus by associative transcriptomics

  Hejna, O., Havlickova, L., He, Z., Bancroft, I. & Curn, V., 1 Aug 2019, In: Molecular Breeding. 39, 112, 13 p., 112.

  Research output: Contribution to journal › Article › peer-review

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• Cytonuclear interactions remain stable during allopolyploid evolution despite repeated whole-genome duplications in Brassica

  Ferreira de Carvalho, J., Lucas, J., Deniot, G., Falentin, C., Filangi, O., Gilet, M., Legeal, F., Lode, M., Morice, J., Trotoux, G., Aury, J.-M., Barbe, V., Keller, J., Snowdon, R., He, Z., Denoeud, F., Wincker, P., Bancroft, I., Chevre, A.-M. & Rosseau-Gueutin, M., 1 May 2019, In: The Plant journal. 98, 3, p. 434-447 14 p.

  Research output: Contribution to journal › Article › peer-review

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• Data in support of genetic architecture of glucosinolate variations in Brassica napus

  Kittipol, V., He, Z., Wang, L., Doheny-Adams, T., Langer, S. & Bancroft, I., Aug 2019, In: Data in Brief. 25, 7 p., 104402.

  Research output: Contribution to journal › Article › peer-review

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• Genetic architecture of glucosinolate variation in Brassica napus

  Kittipol, V., He, Z., Wang, L., Doheny-Adams, T., Langer, S. & Bancroft, I., Sept 2019, In: Journal of Plant Physiology. 8 p., 152988.

  Research output: Contribution to journal › Article › peer-review

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• Genome-wide selection footprints and deleterious variations in young Asian allotetraploid rapeseed

  Zou, J., Mao, L., Qiu, J., Wang, M., Jia, L., Wu, D., He, Z., Chen, M., Shen, Y., Shen, E., Huang, Y., Li, R., Hu, D., Shi, L., Wang, K., Zhu, Q.-H., Ye, C., Bancroft, I., King, G. J. & Meng, J. & 1 others, Fan, L., 1 Oct 2019, In: Plant biotechnology journal. 13 p.

  Research output: Contribution to journal › Article › peer-review

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• 2018

  MOTHER-OF-FT-AND-TFL1 represses seed germination under far-red light by modulating phytohormone responses in Arabidopsis thaliana

  Vaistij, F. E., Barros Galvão, T., Cole, A., Gilday, A. D., He, Z., Li, Y., Harvey, D., Larson, T. R. & Graham, I. A., 14 Aug 2018, In: Proceedings of the National Academy of Sciences of the United States of America. 115, 33, p. 8442-8447 6 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

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• Organisation of the genome sequence of the polyploid crop species Brassica juncea

  Bancroft, I. & He, Z., 24 Sept 2018, In: Nature genetics. 50, p. 1496-1497 2 p.

  Research output: Contribution to journal › Letter › peer-review

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• Species-wide variation in shoot nitrate concentration, and genetic loci controlling nitrate, phosphorus and potassium accumulation in Brassica napus L

  Alcock, T. D., Havlickova, L., He, Z., Wilson, L., Bancroft, I., White, P. J., Broadley, M. R. & Graham, N. S., 16 Oct 2018, In: Frontiers in Plant Science. 17 p.

  Research output: Contribution to journal › Article › peer-review

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• The opium poppy genome and morphinan production.

  Guo, L., Winzer, T. H., Yang, X., Li, Y., Ning, Z., He, Z., Teodor, R. I., Lu, Y., Bowser, T., Graham, I. A. & Ye, K., 19 Oct 2018, In: Science. 362, 6412, p. 343-347 5 p.

  Research output: Contribution to journal › Article › peer-review

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• Validation of an updated Associative Transcriptomics platform for the polyploid crop species Brassica napus by dissection of the genetic architecture of erucic acid and tocopherol isoform variation in seeds

  Havlickova, L., He, Z., Wang, L., Langer, S., Harper, A. L., Kaur, H., Broadley , M. R., Gegas, V. & Bancroft, I., 1 Jan 2018, In: The Plant journal.

  Research output: Contribution to journal › Article › peer-review

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• 2017

  Carbohydrate microarrays and their use for the identification of molecular markers for plant cell wall composition

  Wood, I. P., Pearson, B. M., Garcia-Gutierrez, E., Havlickova, L., He, Z., Harper, A. L., Bancroft, I. & Waldron, K. W., 27 Jun 2017, In: Proceedings of the National Academy of Sciences of the United States of America. 114, 26, p. 6860-6865 6 p.

  Research output: Contribution to journal › Article › peer-review

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• Extensive homoeologous genome exchanges in allopolyploid crops revealed by mRNAseq-based visualization

  He, Z., Wang, L., Harper, A. L., Havlickova, L., Pradhan, A., Parkin, I. & Bancroft, I., 1 May 2017, In: Plant biotechnology journal. 15, 5, p. 594-604 11 p.

  Research output: Contribution to journal › Article › peer-review

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• Genome sequence and genetic diversity of European ash trees

  Sollars, E., Harper, A. L., Kelly, L., Sambles, C., Ramirez-Gonzalez, R., Swarbreck, D., Kaithakottil, G., Cooper, E., Uauy, C., Havlickova, L., Worswick, G., Studholme, D., Zohren, J., Salmon, D., Clavijo, B., Li, Y., He, Z., Fellgett, A., McKinney, L. & Nielsen, L. & 10 others, Douglas, G., Kjaer, E., Downie, A., Boshier, D., Lee, S., Clark, J., Grant, M., Bancroft, I., Caccamo, M. & Buggs, R., 12 Jan 2017, In: Nature. 541, 7636, p. 212-216 5 p.

  Research output: Contribution to journal › Article › peer-review

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• Identification of candidate genes for calcium and magnesium accumulation in Brassica napus L. by association genetics

  Alcock, T. D., Havlickova, L., He, Z., Bancroft, I., White, P. J., Broadley , M. R. & Graham, N. S., 15 Nov 2017, In: Frontiers in Plant Science.

  Research output: Contribution to journal › Article › peer-review

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• 2016

  The breakdown of stored triacylglycerols is required during light-induced stomatal opening

  McLachlan, D. H., Lan, J., Geilfus, C.-M., Dodd, A. N., Larson, T., Baker, A., Horak, H., Kollist, H., He, Z., Graham, I. A., Mickelbart, M. V. & Hetherington, A. M., 7 Mar 2016, In: Current Biology. 26, 5, p. 707-712 6 p.

  Research output: Contribution to journal › Article › peer-review

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• 2015

  Construction of Brassica A and C genome-based ordered pan-transcriptomes for use in rapeseed genomic research.

  He, Z., Cheng, F., Li, Y., Wang, X., Parkin, I. A. P., Chalhoub, B., Liu, S. & Bancroft, I., Sept 2015, In: Data in Brief. 4, p. 357-362 6 p.

  Research output: Contribution to journal › Article › peer-review

• Genome distribution of differential homoeologue contributions to leaf gene expression in bread wheat

  Harper, A. L., Trick, M., He, Z., Clissold, L., Fellgett, A., Griffiths, S. & Bancroft, I., 2015, In: Plant biotechnology journal. 8 p.

  Research output: Contribution to journal › Article › peer-review

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• 2013

  Differential control of seed primary dormancy in Arabidopsis ecotypes by the transcription factor SPATULA.

  Vaistij, F. E., Gan, Y., Penfield, S., Gilday, A. D., Dave, A. R., He, Z., Josse, E.-M., Choi, J., Halliday, K. J. & Graham, I. A., 25 Jun 2013, In: Proceedings of the National Academy of Sciences of the United States of America. 110, 26, p. 10866-10871 6 p.

  Research output: Contribution to journal › Article › peer-review

• Key role for a glutathione transferase in multiple-herbicide resistance in grass weeds

  Cummins, I., Wortley, D. J., Sabbadin, F., He, Z., Coxon, C. R., Straker, H. E., Sellars, J. D., Knight, K., Edwards, L., Hughes, D., Kaundun, S. S., Hutchings, S.-J., Steel, P. G. & Edwards, R., 9 Apr 2013, In: Proceedings of the National Academy of Sciences of the United States of America. 110, 15, p. 5812-5817 6 p.

  Research output: Contribution to journal › Article › peer-review

• Stochastic silencing phenotype of Arabidopsis morc6 mutants reveals a role in efficient RNA-directed DNA methylation

  Brabbs, T. R., He, Z., Hogg, K., Kamenski, A., Li, Y., Paszkiewicz, K. H., Moore, K. A., O'Toole, P. J., Graham, I. A. & Jones, L., 16 May 2013, In: The Plant journal. Early View, n/a, p. n/a 11 p.

  Research output: Contribution to journal › Article › peer-review
• 2012

  A cytosolic acyltransferase contributes to triacylglycerol synthesis in sucrose-rescued Arabidopsis seed oil catabolism mutants.

  Hernandez, M. L., Whitehead, L., He, Z., Gazda, V., Gilday, A., Kozhevnikova, E., Vaistij, F. E., Larson, T. R. & Graham, I. A., 3 Jul 2012, (E-pub ahead of print) In: Plant Physiology. 160, 1, p. 215-225 11 p.

  Research output: Contribution to journal › Article › peer-review

• A Papaver somniferum 10-gene cluster for synthesis of the anticancer alkaloid noscapine.

  Winzer, T. H., Gazda, V., He, Z., Kaminski, F., Kern, M. F., Larson, T. R., Li, Y., Meade, F., Teodor, R. I., Vaistij, F. E., Walker, C., Bowser, T. & Graham, I. A., 29 Jun 2012, In: Science. 336, 6089, p. 1704-1708 5 p.

  Research output: Contribution to journal › Article › peer-review
• 2011

  12-Oxo-Phytodienoic Acid Accumulation during Seed Development Represses Seed Germination in Arabidopsis

  Dave, A., Hernandez, M. L., He, Z., Andriotis, V. M. E., Vaistij, F. E., Larson, T. R. & Graham, I. A., Feb 2011, In: The Plant Cell. 23, 2, p. 583-599 17 p.

  Research output: Contribution to journal › Article › peer-review