A census of carbohydrate-active enzymes in the genome of Arabidopsis thaliana

B Henrissat, P M Coutinho, G J Davies

Research output: Contribution to journalArticlepeer-review

Abstract

The synthesis, modification, and breakdown of carbohydrates is one of the most fundamentally important reactions in nature. The structural and functional diversity of glycosides is mirrored by a vast array of enzymes involved in their synthesis (glycosyltransferases), modification (carbohydrate esterases) and breakdown (glycoside hydrolases and polysaccharide lyases). The importance of these processes is reflected in the dedication of 1-2% of an organism's genes to glycoside hydrolases and glycosyltransferases alone. In plants, these processes are of particular importance for cell-wall synthesis and expansion, starch metabolism, defence against pathogens, symbiosis and signalling. Here we present an analysis of over 730 open reading frames representing the two main classes of carbohydrate-active enzymes, glycoside hydrolases and glycosyltransferases, in the genome of Arabidopsis thaliana. The vast importance of these enzymes in cell-wall formation and degradation is revealed along with the unexpected dominance of pectin degradation in Arabidopsis, with at least 170 open-reading frames dedicated solely to this task.

Original languageEnglish
Pages (from-to)55-72
Number of pages18
JournalPlant Molecular Biology
Volume47
Issue number1-2
Publication statusPublished - 2001

Keywords

  • Arabidopsis
  • genome
  • glycoside hydrolases
  • glycosyltransferases
  • ACID-SEQUENCE SIMILARITIES
  • HORIZONTAL GENE-TRANSFER
  • GLYCOSYL HYDROLASES
  • CRYSTAL-STRUCTURE
  • MOLECULAR-CLONING
  • BIOSYNTHESIS
  • CLASSIFICATION
  • MECHANISMS
  • EXPRESSION
  • GLYCOSYLTRANSFERASES

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