Search research publications and outputs

  1. 2019
  2. Industry-Informed Workshops to Develop Graduate Skill Sets in the Circular Economy Using Systems Thinking

    Summerton, L., Clark, J. H., Hurst, G. A., Ball, P. D., Rylott, E. L., Carslaw, N., Creasey, J., Murray, J., Whitford, J., Dobson, B., Sneddon, H. F., Ross, J., Metcalf, P. & McElroy, C. R., 1 Nov 2019

    Article in JOURNAL OF CHEMICAL EDUCATION

  3. Mining the biomass deconstructing capabilities of rice yellow stem borer symbionts

    Singh, R., Bennett, J. P., Gupta, M., Sharma, M., Eqbal, D., Alessi, A., Dowle, A., McQueen Mason, S. J., Bruce, N. C. & Yazdani, S. S., 24 Oct 2019, (Accepted/In press)

    Article in Biotechnology for biofuels

  4. The genome of Ectocarpus subulatus – a highly stress-tolerant brown alga

    Dittami et al. & Tonon, T., 24 Oct 2019, bioRxiv, at Cold Spring Harbor Laboratory.

    Research output: Working paper

  5. Microalgae Isoprostanoids Profiling: Species Choice and Growing Conditions Impact

    Vigor, C., Reversat, G., Rocher, A., Linares-Maurizi, A., Oger, C., Galano, J-M., Vercauteren, J., Durand, T., Leblanc, C., Potin, P. & Tonon, T., 20 Oct 2019.

    Research output: Contribution to conferencePoster

  6. Anaerobic digestion of Crassulacean Acid Metabolism plants: Exploring alternative feedstocks for semi-arid lands

    Lueangwattanapong, K., Ammam, F., Mason, P. M., Whitehead, C., McQueen-Mason, S. J., Gomez, L. D., Smith, J. A. C. & Thompson, I. P., 14 Oct 2019

    Article in BIORESOURCE TECHNOLOGY

  7. Insights into microbial community structure and diversity in oil palm waste compost

    Khalid, N. A., Rajandas, H., Parimannan, S., Croft, L. J., Loke, S., Chong, C. S., Bruce, N. C. & Yahya, A., 1 Oct 2019

    Article in 3 Biotech

  8. cis-12-oxo-phytodienoic acid represses Arabidopsis thaliana seed germination in shade light conditions

    Barros Galvão, T., Dave, A., Cole, A. F., Harvey, D., Langer, S., Larson, TR., Vaistij, F. E. & Graham, I. A., 20 Jul 2019

    Article in Journal of Experimental Botany

  9. Designing xylan for improved sustainable biofuel production

    Oliveira, D. M., Mota, T. R., Salatta, F. V., Marchiosi, R., Gomez, L. D., McQueen-Mason, S. J., Ferrarese-Filho, O. & Dos Santos, W. D., 11 May 2019

    Article in Plant biotechnology journal

  10. Study of backward terahertz radiation from intense picosecond laser-solid interactions using a multichannel calorimeter system

    Liu, H., Liao, G. Q., Zhang, Y. H., Zhu, B. J., Zhang, Z., Li, Y. T., Scott, G. G., Rusby, D., Armstrong, C., Zemaityte, E., Bradford, P., Woolsey, N., Huggard, P., McKenna, P. & Neely, D., 22 Jan 2019

    Article in High Power Laser Science and Engineering

  11. 2018
  12. The low-oxygen response is triggered by an ATP-dependent shift in oleoyl-CoA in Arabidopsis

    Schmidt, R., Fulda, M., Paul, M., Anders, M., Plum, F., Weits, D., Kosmacz, M., Larson, T., Graham, I. A., Beemster, G., Licausi, F., Gelgenberger, P., Schippers, J. & van Dongen, J. T., 18 Dec 2018

    Article in Proceedings of the National Academy of Sciences of the United States of America

  13. Hemocyanin facilitates lignocellulose digestion by wood-boring marine crustaceans

    Besser, K., Malyon, G. P., Eborall, W. S., Paro da Cunha, G., Goncalves Filgueiras, J., Dowle, A., Cruz Garcia, L., Page, S. J., Dupree, R., Kern, M. F., Gomez, L. D., Li, Y., Elias, L., Sabbadin, F., Mohamad, S. E., Pesante, G., Steele-King, C. G., Ribeiro de Azevedo, E., Polikarpov, I., Dupree, P. & 3 others, Cragg, S. M., Bruce, N. C. & McQueen Mason, S. J., 3 Dec 2018

    Article in Nature Communications

  14. Isoprostanoids quantitative profiling of marine red and brown macroalgae

    Vigor, C., Reversat, G., Rocher, A., Oger, C., Galano, J-M., Vercauteren, J., Durand, T., Tonon, T., Leblanc, C. & Potin, P., 1 Dec 2018

    Article in Food Chemistry

  15. Plant–Rhizobium symbiosis, seed nutraceuticals, and waste quality for energy production of Vicia faba L. as affected by crop management

    Amalfitano, C., Gomez, L. D., Frendo, P., De Pascale, S., Pepe, O., Simister, R., Ventorino, V., Agrelli, D., Borrelli, C., McQueen-Mason, S. J. & Caruso, G., 1 Dec 2018

    Article in Chemical and Biological Technologies in Agriculture

  16. Functional and informatics analysis enables glycosyltransferase activity prediction

    Yang, M., Fehl, C., Lees, K. V., Lim, E-K., Offen, W. A., Davies, G. J., Bowles, D. J., Davidson, M. G., Roberts, S. J. & Davis, B. G., 12 Nov 2018

    Article in NATURE CHEMICAL BIOLOGY

  17. Response of cell wall composition and RNA-seq transcriptome to methyl-jasmonate in Brachypodium distachyon callus

    Hyde, L. S., Pellny, T. K., Freeman, J., Michaelson, L. V., Simister, R., McQueen Mason, S. J. & Mitchell, R. A. C., 1 Nov 2018

    Article in Planta

  18. The opium poppy genome and morphinan production.

    Guo, L., Winzer, T. H., Yang, X., Li, Y., Ning, Z., He, Z., Teodor, R. I., Lu, Y., Bowser, T., Graham, I. A. & Ye, K., 19 Oct 2018

    Article in Science

  19. A glycosyl transferase family 43 protein involved in xylan biosynthesis is associated with straw digestibility in Brachypodium distachyon

    Whitehead, C., Ostos Garrido, F. J., Reymond, M., Simister, R., Distelfeld, A., Atienza, S. G., Piston, F., Gomez, L. D. & Mcqueen-Mason, S. J., 25 Mar 2018

    Article in The New phytologist

  20. Uncovering the molecular mechanisms of lignocellulose digestion in shipworms

    Sabbadin, F., Pesante, G., Elias, L., Besser, K., Li, Y., Steele-King, C. G., Stark, M., Rathbone, D. A., Dowle, A., Bates, R., Shipway, J. R., Cragg, S. M., Bruce, N. C. & McQueen Mason, S. J., 7 Mar 2018

    Article in Biotechnology for biofuels

  21. Brown algal genes impart abiotic stress tolerance in Arabidopsis thaliania

    Rathor et al. , 2018.

    Research output: Contribution to conferencePoster

  22. 2017
  23. Valorising faba bean residual biomass: Effect of farming system and planting time on the potential for biofuel production

    Gómez, L. D., Amalfitano, C., Andolfi, A., Simister, R., Somma, S., Ercolano, M. R., Borrelli, C., McQueen-Mason, S. J., Frusciante, L., Cuciniello, A. & Caruso, G., 1 Dec 2017

    Article in Biomass & bioenergy

  24. An oleuropein β-glucosidase from olive fruit is involved in determining the phenolic composition of virgin olive oil

    Velazquez-Palmero, D., Romero-Segura, C., Garcia-Rodriguez, R., Hernandez, M. L., Vaistij, F. E., Graham, I. A., Perez, A. G. & Martinez-Rivas, J. M., 7 Nov 2017

    Article in Frontiers in Plant Science

  25. Targeted metatranscriptomics of compost derived consortia reveals a GH11 exerting an unusual exo-1,4-β-xylanase activity

    Mello, B., Alessi, A., Riaño-Pachón, D., deAzevedo, E., Guimarães, F., Espirito Santo, M., McQueen Mason, S. J., Bruce, N. C. & Polikarpov, I., 2 Nov 2017

    Article in Biotechnology for biofuels

  26. Jasmonic acid-dependent regulation of seed dormancy following maternal herbivory in Arabidopsis

    Singh, P., Dave, A., Vaistij, F. E., Worrall, D., Holroyd, G., Wells, J., Kaminski, F., Graham, I. A. & Roberts, M., Jun 2017

    Article in New Phytologist

  27. Genetic complexity of miscanthus cell wall composition and biomass quality for biofuels

    van der Weijde, T., Kamei, C. L. A., Severing, E. I., Torres, A. F., Gomez, L. D., Dolstra, O., Maliepaard, C. A., McQueen-Mason, S. J., Visser, R. G. F. & Trindade, L. M., 25 May 2017

    Article in BMC Genomics

  28. Towards financially viable phytoextraction and production of plant-based palladium catalysts

    Harumain, Z. A. S., Parker, H. L., Muñoz García, A., Austin, M. J., McElroy, C. R., Hunt, A. J., Clark, J. H., Meech, J. A., Anderson, C. W. N., Ciacci, L., Graedel, T. E., Bruce, N. C. & Rylott, E. L., 7 Mar 2017

    Article in Environmental science & technology

  29. Meneco, a Topology-Based Gap-Filling Tool Applicable to Degraded Genome-Wide Metabolic Networks

    Prigent, S., Frioux, C., Dittami, S. D., Larhlimi, A., Collet, G., Gutknecht, F., Got, J., Eveillard, D., Bourdon, J., Plewniak, F., Tonon, T. & Siegel, A., 27 Jan 2017

    Article in PLoS Computational Biology

  30. Genome sequence and genetic diversity of European ash trees

    Sollars, E., Harper, A. L., Kelly, L., Sambles, C., Ramirez-Gonzalez, R., Swarbreck, D., Kaithakottil, G., Cooper, E., Uauy, C., Havlickova, L., Worswick, G., Studholme, D., Zohren, J., Salmon, D., Clavijo, B., Li, Y., He, Z., Fellgett, A., McKinney, L., Nielsen, L. & 10 others, Douglas, G., Kjaer, E., Downie, A., Boshier, D., Lee, S., Clark, J., Grant, M., Bancroft, I., Caccamo, M. & Buggs, R., 12 Jan 2017

    Article in Nature

  31. Molecular tools to engineer cyanobacteria for industrial biotechnology

    Madsen et al. , 2017.

    Research output: Contribution to conferencePoster

  32. 2016
  33. Linkage Mapping of Stem Saccharification Digestibility in Rice

    Liu, B., Gómez, L. D., Hua, C., Sun, L., Ali, I., Huang, L., Yu, C., Simister, R., Steele-King, C., Gan, Y. & McQueen-Mason, S. J., 12 Jul 2016

    Article in PLoS ONE

  34. The breakdown of stored triacylglycerols is required during light-induced stomatal opening.

    McLachlan, D. H., Lan, J., Geilfus, C-M., Dodd, A. N., Larson, TR., Baker, A., Horak, H., Kollist, H., He, Z., Graham, I. A., Mickelbart, M. V. & Hetherington, A. M., 7 Mar 2016

    Article in Current Biology

  35. Genetic diversity of eight millet genera assessed by using molecular and morphological markers

    Dvořáková, Z., Čepková, P. H., Viehmannová, I., Havlicková, L. & Janovská, D., 29 Feb 2016

    Article in Crop and Pasture Science

  36. The genome of the seagrass Zostera marina reveals angiosperm adaptation to the sea

    Olsen, J. L., Rouzé, P., Verhelst, B., Lin, Y-C., Bayer, T., Collen, J., Dattolo, E., De Paoli, E., Dittami, S., Maumus, F., Michel, G., Kersting, A., Lauritano, C., Lohaus, R., Töpel, M., Tonon, T., Vanneste, K., Amirebrahimi, M., Brakel, J., Boström, C. & 15 others, Chovatia, M., Grimwood, J., Jenkins, J. W., Jueterbock, A., Mraz, A., Stam, W. T., Tice, H., Bornberg-Bauer, E., Green, P. J., Pearson, G. A., Procaccini, G., Duarte, C. M., Schmutz, J., Reusch, T. B. H. & Van de Peer, Y., 18 Feb 2016

    Article in Nature

  37. Host-microbe interactions as a driver of acclimation to salinity gradients in brown algal cultures

    Dittami, S. M., Duboscq-Bidot, L., Perennou, M., Gobet, A., Gobet, A., Corre, E., Boyen, C. & Tonon, T., Jan 2016

    Article in The ISME Journal

  38. 2015
  39. Lignocellulose degradation mechanisms across the Tree of Life

    Cragg, S. M., Beckham, G. T., Bruce, N. C., Bugg, T. D. H., Distel, D. L., Dupree, P., Etxabe, A. G., Goodell, B. S., Jellison, J., McGeehan, J. E., McQueen-Mason, S. J., Schnorr, K., Walton, P. H., Watts, J. E. M. & Zimmer, M., Dec 2015

    Review article in Current Opinion in Chemical Biology

  40. Identification of QTL markers contributing to plant growth, oil yield and fatty acid composition in the oilseed crop Jatropha curcas L

    King, A. J., Montes, L., Clarke, J. G., Iztep, J., Perez, C. A. A., Jongschaap, R. E. E., Visser, R. G. F., van Loo, E. & Graham, I. A., 25 Sep 2015

    Article in Biotechnology for biofuels

  41. Morphinan biosynthesis in opium poppy requires a P450-oxidoreductase fusion protein

    Winzer, T. H., Kern, M. F., King, A. J., Larson, TR., Teodor, R. I., Donninger, S., Li, Y., Dowle, A., Cartwright, J., Bates, R., David, A., Thomas, J., Walker, C., Bowser, T. & Graham, I. A., 17 Jul 2015

    Article in Science

  42. Effect of Brassica napus cultivar on cellulosic ethanol yield

    Wood, I. P., Wellner, N., Elliston, A., Wilson, D. R., Bancroft, I. & Waldron, K. W., 11 Jul 2015

    Article in Biotechnology for biofuels

  43. Expression of fungal acetyl xylan esterase in Arabidopsis thaliana improves saccharification of stem lignocellulose.

    Pawar, P. M-A., Derba-Maceluch, M., Chong, S-L., Gomez, L. D., Miedes, E., Ratke, C., Gaertner, C., Mouille, G., McQueen Mason, S. J., Molina, A., Sellstedt, A., Tenkanen, M. & Mellerowicz, E., 11 May 2015

    Article in Plant biotechnology journal

  44. Marine systems biology

    Tonon, T. & Eveillard, D., May 2015

    Editorial in Frontiers in genetics

  45. Monoclonal antibodies directed to fucoidan preparations from brown algae

    Torode, T. A., Marcus, S. E., Jam, M., Tonon, T., Blackburn, R. S., Hervé, C. & Knox, J. P., 18 Feb 2015

    Article in PLoS ONE

  46. Residual biomass saccharification in processing tomato is affected by cultivar and nitrogen fertilization

    Ercolano, M. R., Gomez, L. D., Andolfi, A., Simister, R., Troise, C., Angelino, G., Borrelli, C., McQueen-Mason, S. J., Evidente, A., Frusciante, L. & Caruso, G., Jan 2015

    Article in Biomass & bioenergy

  47. 2014
  48. Side by Side Comparison of Chemical Compounds Generated by Aqueous Pretreatments of Maize Stover, Miscanthus and Sugarcane Bagasse

    Gómez, L. D., Vanholme, R., Bird, S., Goeminne, G., Trindade, L. M., Polikarpov, I., Simister, R., Morreel, K., Boerjan, W. & McQueen Mason, S. J., Dec 2014

    Article in BioEnergy Research

  49. The genome-scale metabolic network of Ectocarpus siliculosus (EctoGEM): a resource to study brown algal physiology and beyond

    Prigent, S., Collet, G., Dittami, S. M., Delage, L., Ethis de Corny, F., Dameron, O., Eveillard, D., Thiele, S., Cambefort, J., Boyen, C., Siegel, A. & Tonon, T., Oct 2014

    Article in The Plant journal

  50. Genome and metabolic network of "Candidatus Phaeomarinobacter ectocarpi" Ec32, a new candidate genus of Alphaproteobacteria frequently associated with brown algae

    Dittami, S. M., Barbeyron, T., Boyen, C., Cambefort, J., Collet, G., Delage, L., Gobet, A., Groisillier, A., Leblanc, C., Michel, G., Scornet, D., Siegel, A., Tapia, J. E. & Tonon, T., 25 Jul 2014

    Article in Frontiers in genetics

  51. Gene Mining for Environmental Studies and Applications: Examples from Marine Organisms

    Dittami, S. M. & Tonon, T., 9 Jun 2014, Outstanding Marine Molecules: Chemistry, Biology, Analysis. Wiley-Blackwell, p. 435-456 22 p.

    Research output: Chapter in Book/Report/Conference proceedingChapter

  52. Mannitol metabolism in brown algae involves a new phosphatase family

    Groisillier, A., Shao, Z., Michel, G., Goulitquer, S., Bonin, P., Krahulec, S., Nidetzky, B., Duan, D., Boyen, C. & Tonon, T., 1 Feb 2014

    Article in Journal of Experimental Botany

  53. An essential role for LPA signalling in telencephalon development

    Geach, T. J., Faas, L., Devader, C., Gonzalez-Cordero, A., Brunsdon, H., tabler, J., Isaacs, H. V. & Dale, L., Feb 2014

    Article in Development

  54. Phytoextraction as a tool for green chemistry

    Hunt, A. J., Anderson, C., Bruce, N. C., Garcia, A. M., Graedel, T., Hodson, M. E., Meech, J., Nassar, N., Parker, H. L., Rylott, L., Sotiriou, K., Zhang, Q. & Clark, J. H., Feb 2014

    Article in Green Processing and Synthesis

  55. Evaluating the composition and processing potential of novel sources of Brazilian biomass for sustainable biorenewables production

    Lima, M. A., Gomez, L. D., Steele-King, C. G., Simister, R., Bernardinelli, O. D., Carvalho, M. A., Rezende, C. A., Labate, C. A., Deazevedo, E. R., McQueen-Mason, S. J., Polikarpov, I. & McQueen Mason, S. J., 18 Jan 2014

    Article in Biotechnology for biofuels

  56. Automated enzyme classification by formal concept analysis

    Coste, F., Garet, G., Groisillier, A., Nicolas, J. & Tonon, T., 1 Jan 2014, Formal Concept Analysis - 12th International Conference, ICFCA 2014, Proceedings. Springer-Verlag, p. 235-250 16 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 8478 LNAI).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  57. Chondrus crispus - A present and historical model organism for red seaweeds

    Collén, J., Cornish, M. L., Craigie, J., Ficko-Blean, E., Hervé, C., Krueger-Hadfield, S. A., Leblanc, C., Michel, G., Potin, P., Tonon, T. & Boyen, C., 2014

    Article in Advances in Botanical Research

  58. Effect of a mutagenized acyl‐ACP thioesterase FATA allele from sunflower with improved activity in tobacco leaves and Arabidopsis seeds.

    Moreno-Pérez, A. J., Venegas‐Calerón, M., Vaistij, F. E., Salas, J. J., Larson, T. R., Garcés, R., Graham, I. A. & Martínez-Force, E., 2014

    Article in Planta

  59. 2013
  60. Identification of crop cultivars with consistently high lignocellulosic sugar release requires the use of appropriate statistical design and modelling.

    Oakey, H., Shafiei, R., Comadran, J., Uzrek, N., Cullis, B., Gomez, L., Whitehead, C., McQueen Mason, S. J., Waugh, R. & Halpin, C., 21 Dec 2013

    Article in Biotechnology for biofuels

  61. Different stress responsive strategies to drought and heat in two durum wheat cultivars with contrasting water use efficiency

    Aprile, A., Havlickova, L., Panna, R., Marè, C., Borrelli, G. M., Marone, D., Perrotta, C., Rampino, P., De Bellis, L., Curn, V., Mastrangelo, A. M., Rizza, F. & Cattivelli, L., 22 Nov 2013

    Article in BMC Genomics

  62. An inhibitor of oil body mobilization in Arabidopsis.

    Brown, L-A., Larson, T., Graham, I. A., Hawes, C., Paudyal, R., Warriner, S. & Baker, A., Nov 2013

    Article in New Phytologist

  63. Photosynthetic entrainment of the Arabidopsis thaliana circadian clock

    Haydon, M. J., Mielczarek, O., Robertson, F. C., Hubbard, K. E. & Webb, A. A. R., 31 Oct 2013

    Article in Nature

  64. Genetic diversity of yacon (Smallanthus sonchifolius (Poepp. & Endl.) H. Robinson) and its wild relatives as revealed by ISSR markers

    Svobodová, E., Dvořáková, Z., Čepková, P. H., Viehmannová, I., Havlíčková, L., Cusimamani, E. F., Russo, D. & Meza Zela, G., Oct 2013

    Article in Biochemical systematics and ecology

  65. Linkage mapping in the oilseed crop Jatropha curcas L. reveals a locus controlling the biosynthesis of phorbol esters which cause seed toxicity.

    King, A. J., Montes, L., Clarke, J. G., Affleck, J., Li, Y., Witsenboer, H., van der Vossen, E., van der Linde, P., Tripathi, Y., Tavares, E., Shukla, P., Rajasekaran, T., van Loo, E. & Graham, I. A., Oct 2013

    Article in Plant biotechnology journal

  66. Structural characterization of a unique marine animal family 7 cellobiohydrolase suggests a mechanism of cellulase salt tolerance

    Kern, M., McGeehan, J. E., Streeter, S. D., Martin, R. N. A., Besser, K., Elias, L., Eborall, W., Malyon, G. P., Payne, C. M., Himmel, M. E., Schnorr, K., Beckham, G. T., Cragg, S. M., Bruce, N. C. & McQueen Mason, S. J., 3 Jun 2013

    Article in Proceedings of the National Academy of Sciences of the United States of America

  67. Metabolic regulation of circadian clocks

    Haydon, M. J., Hearn, T. J., Bell, L. J., Hannah, M. A. & Webb, A. A. R., May 2013

    Literature review in Seminars in cell & developmental biology

  68. Key role for a glutathione transferase in multiple-herbicide resistance in grass weeds

    Cummins, I., Wortley, D. J., Sabbadin, F., He, Z., Coxon, C. R., Straker, H. E., Sellars, J. D., Knight, K., Edwards, L., Hughes, D., Kaundun, S. S., Hutchings, S-J., Steel, P. G. & Edwards, R., 9 Apr 2013

    Article in Proceedings of the National Academy of Sciences of the United States of America

  69. Genome structure and metabolic features in the red seaweed Chondrus crispus shed light on evolution of the Archaeplastida

    Collén, J., Porcel, B., Carré, W., Ball, S. G., Chaparro, C., Tonon, T., Barbeyron, T., Michel, G., Noel, B., Valentin, K., Elias, M., Artiguenave, F., Arun, A., Aury, J-M., Barbosa-Neto, J. F., Bothwell, J. H., Bouget, F-Y., Brillet, L., Cabello-Hurtado, F., Capella-Gutiérrez, S. & 38 others, Charrier, B., Cladière, L., Cock, J. M., Coelho, S. M., Colleoni, C., Czjzek, M., Da Silva, C., Delage, L., Denoeud, F., Deschamps, P., Dittami, S. M., Gabaldón, T., Gachon, C. M. M., Groisillier, A., Hervé, C., Jabbari, K., Katinka, M., Kloareg, B., Kowalczyk, N., Labadie, K., Leblanc, C., Lopez, P. J., McLachlan, D. H., Meslet-Cladiere, L., Moustafa, A., Nehr, Z., Nyvall Collén, P., Panaud, O., Partensky, F., Poulain, J., Rensing, S. A., Rousvoal, S., Samson, G., Symeonidi, A., Weissenbach, J., Zambounis, A., Wincker, P. & Boyen, C., 26 Mar 2013

    Article in Proceedings of the National Academy of Sciences of the United States of America

  70. Disrupting the cynnamil alcohol dehydrogenase 1 gene (BdCAD1) leads to altered lignification and improved saccharification in Brachypodium distachyon.

    M.B d'Yvoire, O. Bouchabke-Coussa, W.Voorend, S. Antelme, L. Cezard, F. Legee, P. Lebris, S. Legay, Whitehead, C. B., McQueen Mason, S. J., Gomez, L. D., L. Jouanin, C. Lapierre & R. Sibout, Feb 2013

    Article in Plant Journal

  71. 2012
  72. The Ectocarpus Genome and Brown Algal Genomics. The Ectocarpus Genome Consortium.

    Cock, J. M., Sterck, L., Ahmed, S., Allen, A. E., Amoutzias, G., Anthouard, V., Artiguenave, F., Arun, A., Aury, J. M., Badger, J. H., Beszteri, B., Billiau, K., Bonnet, E., Bothwell, J. H., Bowler, C., Boyen, C., Brownlee, C., Carrano, C. J., Charrier, B., Cho, G. Y. & 64 others, Coelho, S. M., Collén, J., Le Corguillé, G., Corre, E., Dartevelle, L., Da Silva, C., Delage, L., Delaroque, N., Dittami, S. M., Doulbeau, S., Elias, M., Farnham, G., Gachon, C. M. M., Godfroy, O., Gschloessl, B., Heesch, S., Jabbari, K., Jubin, C., Kawai, H., Kimura, K., Kloareg, B., Küpper, F. C., Lang, D., Le Bail, A., Luthringer, R., Leblanc, C., Lerouge, P., Lohr, M., Lopez, P. J., Macaisne, N., Martens, C., Maumus, F., Michel, G., Miranda-Saavedra, D., Morales, J., Moreau, H., Motomura, T., Nagasato, C., Napoli, C. A., Nelson, D. R., Nyvall-Collén, P., Peters, A. F., Pommier, C., Potin, P., Poulain, J., Quesneville, H., Read, B., Rensing, S. A., Ritter, A., Rousvoal, S., Samanta, M., Samson, G., Schroeder, D. C., Scornet, D., Ségurens, B., Strittmatter, M., Tonon, T., Tregear, J. W., Valentin, K., Von Dassow, P., Yamagishi, T., Rouzé, P., Van de Peer, Y. & Wincker, P., 2 Oct 2012

    Article in Advances in Botanical Research

  73. Arabidopsis GT34 family contains five xyloglucan α-1,6-xylosyltransferases.

    McQueen Mason, S. J., Vuttipongchaikij S, Broclehurst D, Steele-King C, Ashford DA, & Gomez LD, Aug 2012

    Article in New Phytologist

  74. Towards deciphering dynamic changes and evolutionary mechanisms involved in the adaptation to low salinities in Ectocarpus (brown algae)

    Dittami, S. M., Gravot, A., Goulitquer, S., Rousvoal, S., Peters, A. F., Bouchereau, A., Boyen, C. & Tonon, T., Aug 2012

    Article in The Plant journal

  75. Role of Plant Laccases in Lignin Polymerization

    Berthet, S., Thevenin, J., Baratiny, D., Demont-Caulet, N., Debeaujon, I., Bidzinski, P., Leple, J. C., Huis, R., Hawkins, S., Gomez, L. D., Lapierre, C. & Jouanin, L., 14 Jun 2012

    Article in Advances in Botanical Research

  76. Reduced expression of FatA thioesterases in Arabidopsis affects the oil content and fatty acid composition of the seeds

    Moreno-Perez, AJ., Venegas-Caleron, M., Vaistij, F. E., Salas, JJ., Larson, TR., Garces, R., Graham, I. A. & Martinez-Force, E., Mar 2012

    Article in Planta

  77. Factors limiting the synthesis of virgin olive oil volatile esters

    Sanchez-Ortiz, A., Romero-Segura, C., Gazda, V., Graham, I. A., Sanz, C. & Perez, AG., 8 Feb 2012

    Article in Journal of Agricultural and Food Chemistry

  78. Tissue-Specific Whole Transcriptome Sequencing in Castor, Directed at Understanding Triacylglycerol Lipid Biosynthetic Pathways

    Brown, A. P., Kroon, J. T. M., Swarbreck, D., Febrer, M., Larson, T. R., Graham, I. A., Caccamo, M. & Slabas, A. R., 3 Feb 2012

    Article in PLoS ONE

  79. Rosiglitazone increases fatty acid Δ9-desaturation and decreases elongase activity index in human skeletal muscle in vivo

    Mai, K., Andres, J., Bobbert, T., Assmann, T., Biedasek, K., Diederich, S., Graham, I. A., Larson, T. R., Pfeiffer, AF. & Spranger, J., Jan 2012

    Article in Metabolism

  80. 2011
  81. Toward systems biology in brown algae to explore acclimation and adaptation to the shore environment

    Tonon, T., Eveillard, D., Prigent, S., Bourdon, J., Potin, P., Boyen, C. & Siegel, A., Dec 2011

    Review article in Omics : a journal of integrative biology

  82. High throughput discovery of heteroaromatic-modifying enzymes allows enhancement of novobiocin selectivity

    Patel, S. M., de la Fuente, M., Ke, S., Guimaraes, A. M. R., Oliyide, A. O., Ji, X., Stapleton, P., Osbourn, A., Pan, Y., Bowles, D. J., Davis, B. G., Schatzlein, A. & Yang, M., 14 Oct 2011

    Article in Chemical Communications

  83. Mannitol in six autotrophic stramenopiles and Micromonas

    Dittami, S. M., Aas, H. T. N., Paulsen, B. S., Boyen, C., Edvardsen, B. & Tonon, T., Aug 2011

    Article in Plant Signaling and Behavior

  84. Multiple roles for plant glutathione transferases in xenobiotic detoxification.

    Edwards, R., Cummins, I., Dixon, D.P, Freitag-Pohl, S. & Skipsey, M., May 2011

    Article in Drug metabolism reviews

  85. A DELLA in Disguise: SPATULA Restrains the Growth of the Developing Arabidopsis Seedling

    Josse, E-M., Gan, Y., Bou-Torrent, J., Stewart, K. L., Gilday, A. D., Jeffree, C. E., Vaistij, F. E., Martinez-Garcia, J. F., Nagy, F., Graham, I. A. & Halliday, K. J., Apr 2011

    Article in The Plant Cell

  86. The circadian oscillator gene GIGANTEA mediates a long-term response of the Arabidopsis thaliana circadian clock to sucrose

    Dalchau, N., Baek, S. J., Briggs, H. M., Robertson, F. C., Dodd, A. N., Gardner, M. J., Stancombe, M. A., Haydon, M. J., Stan, G-B., Gonçalves, J. M. & Webb, A. A. R., 22 Mar 2011

    Article in Proceedings of the National Academy of Sciences of the United States of America

  87. Cloning, tissue expression analysis, and functional characterization of two Δ6-desaturase variants of sea bass (Dicentrarchus labrax L.)

    Santigosa, E., Geay, F., Tonon, T., Le Delliou, H., Kuhl, H., Reinhardt, R., Corcos, L., Cahu, C., Zambonino-Infante, J. L. & Mazurais, D., Feb 2011

    Article in Marine biotechnology (New York, N.Y.)

  88. Mannitol-1-phosphate dehydrogenase activity in Ectocarpus siliculosus, a key role for mannitol synthesis in brown algae

    Rousvoal, S., Groisillier, A., Dittami, S. M., Michel, G., Boyen, C. & Tonon, T., Feb 2011

    Article in Planta

  89. Microarray estimation of genomic inter-strain variability in the genus Ectocarpus (Phaeophyceae)

    Dittami, S. M., Proux, C., Rousvoal, S., Peters, A. F., Cock, J. M., Coppée, J-Y., Boyen, C. & Tonon, T., 13 Jan 2011

    Article in BMC Molecular Biology

  90. Conserved cysteine residues in the mammalian lamin A tail are essential for cellular resposes to ROS generation.

    Edwards, R., Pekovic,V., Gibbs-Seymour, I., Markiewicz, E., Alzoghaibi, F., Benham, A.M, Wenhert, M., von Zglinicki, T. & Hutchison, C.J, 2011

    Article in Aging Cell

  91. 2010
  92. Diurnal oscillations of metabolite abundances and gene analysis provide new insights into central metabolic processes of the brown alga Ectocarpus siliculosus

    Gravot, A., Dittami, S. M., Rousvoal, S., Lugan, R., Eggert, A., Collén, J., Boyen, C., Bouchereau, A. & Tonon, T., Oct 2010

    Article in The New phytologist

  93. SPATULA links daytime temperature and plant growth rate

    Sidaway-Lee, K., Josse, E-M., Brown, A., Gan, Y., Halliday, K., Graham, I. A. & Penfield, S., 24 Aug 2010

    Article in Current Biology

  94. Hydrophilicity, the major determining factor influencing the solvation environment of protic ionic liquids

    Wright, L., Sanders, M. W., Tate, L., Fairless, G., Crowhurst, L., Bruce, N. C., Walker, A. J., Hembury, G. A. & Shimizu, S., 21 Aug 2010

    Article in Physical Chemistry Chemical Physics

  95. Potassium deficiency induces the biosynthesis of oxylipins and glucosinolates in Arabidopsis thaliana

    Troufflard, S., Mullen, W., Larson, T. R., Graham, I. A., Crozier, A., Amtmann, A. & Armengaud, P., 11 Aug 2010

    Article in BMC Plant Biology

  96. Enhancement of Plant Metabolite Fingerprinting by Machine Learning

    Scott, I. M., Vermeer, C. P., Liakata, M., Corol, D. I., Ward, J. L., Lin, W., Johnson, H. E., Whitehead, L., Kular, B., Baker, J. M., Walsh, S., Dave, A., Larson, T. R., Graham, I. A., Wang, T. L., King, R. D., Draper, J. & Beale, M. H., Aug 2010

    Article in Plant Physiology

  97. The Ectocarpus genome and the independent evolution of multicellularity in brown algae

    Cock, J. M., Sterck, L., Rouzé, P., Scornet, D., Allen, A. E., Amoutzias, G., Anthouard, V., Artiguenave, F., Aury, J-M., Badger, J. H., Beszteri, B., Billiau, K., Bonnet, E., Bothwell, J. H., Bowler, C., Boyen, C., Brownlee, C., Carrano, C. J., Charrier, B., Cho, G. Y. & 57 others, Coelho, S. M., Collén, J., Corre, E., Da Silva, C., Delage, L., Delaroque, N., Dittami, S. M., Doulbeau, S., Elias, M., Farnham, G., Gachon, C. M. M., Gschloessl, B., Heesch, S., Jabbari, K., Jubin, C., Kawai, H., Kimura, K., Kloareg, B., Küpper, F. C., Lang, D., Le Bail, A., Leblanc, C., Lerouge, P., Lohr, M., Lopez, P. J., Martens, C., Maumus, F., Michel, G., Miranda-Saavedra, D., Morales, J., Moreau, H., Motomura, T., Nagasato, C., Napoli, C. A., Nelson, D. R., Nyvall-Collén, P., Peters, A. F., Pommier, C., Potin, P., Poulain, J., Quesneville, H., Read, B., Rensing, S. A., Ritter, A., Rousvoal, S., Samanta, M., Samson, G., Schroeder, D. C., Ségurens, B., Strittmatter, M., Tonon, T., Tregear, J. W., Valentin, K., von Dassow, P., Yamagishi, T., Van de Peer, Y. & Wincker, P., 3 Jun 2010

    Article in Nature

  98. Copper stress proteomics highlights local adaptation of two strains of the model brown alga Ectocarpus siliculosus

    Ritter, A., Ubertini, M., Romac, S., Gaillard, F., Delage, L., Mann, A., Cock, J. M., Tonon, T., Correa, J. A. & Potin, P., Jun 2010

    Article in Proteomics

  99. LICRED: A Versatile Drop-In Vector for Rapid Generation of Redox-Self-Sufficient Cytochrome P450s

    Sabbadin, F., Hyde, R., Robin, A., Hilgarth, E-M., Delenne, M., Flitsch, S., Turner, N., Grogan, G. & Bruce, N. C., 3 May 2010

    Article in Chembiochem

  100. BODIPY probes to study peroxisome dynamics in vivo.

    Edwards, R., Landrum, M., Smertenko, A., Hussey, P.J & Steel, P.G, May 2010

    Article in Plant Journal

  101. Identification of the 2-Hydroxyglutarate and Isovaleryl-CoA Dehydrogenases as Alternative Electron Donors Linking Lysine Catabolism to the Electron Transport Chain of Arabidopsis Mitochondria

    Araujo, W. L., Ishizaki, K., Nunes-Nesi, A., Larson, T. R., Tohge, T., Krahnert, I., Witt, S., Obata, T., Schauer, N., Graham, I. A., Leaver, C. J. & Fernie, A. R., May 2010

    Article in The Plant Cell

  102. Toxicity of unsaturated fatty acids to the biohydrogenating ruminal bacterium, Butyrivibrio fibrisolvens

    Maia, M. R. G., Chaudhary, L. C., Bestwick, C. S., Richardson, A. J., McKain, N., Larson, T. R., Graham, I. A. & Wallace, R. J., 18 Feb 2010

    Article in Bmc microbiology

  103. Expansins expression is associated with grain size dynamics in wheat (Triticum aestivum L.)

    McQueen Mason, S. J., Lizana, X. C., Riegel, R., Gomez, L. D., Herrera, J., Isla, A. & Calderini, D. F., Feb 2010

    Article in Journal of Experimental Botany

  104. The genetic map of Artemisia annua L. identifies multiple loci affecting yield of the antimalarial drug artemisinin

    Graham, I. A., Besser, K., Blumer, S., Branigan, C. A., Czechowski, T., Elias, L., Guterman, I., Harvey, D., Isaac, P. G., Khan, A. M., Larson, T. R., Li, Y., Pawson, T., Penfield, T., Rae, A. M., Rathbone, D. A., Reid, S., Ross, J., Smallwood, M. F., Segura, V. & 4 others, Townsend, T., Vyas, D., Winzer, T. & Bowles, D., 15 Jan 2010

    Article in Science

  105. Collisionless shock generation by a high-power laser

    Morita, T., Sakawa, Y., Kuramitsu, Y., Dono, S., Aoki, H., Tanji, H., Kato, T., Li, Y. T., Zhang, Y., Liu, X., Zhong, J. Y., Woolsey, N., Takabe, H. & Zhang, J., 2010, SIXTH INTERNATIONAL CONFERENCE ON INERTIAL FUSION SCIENCES AND APPLICATIONS, PARTS 1-4. BRISTOL: IOP PUBLISHING LTD, p. - 4 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  106. Fluorescence quenched quinone methide based activity probes-a cautionary tale.

    Edwards, R., Sellars, J.D, Landrum, M., Congreve, A., Dixon, D.P, Moseley, J.A, Beeby, A. & Steel, P.G, 2010

    Article in Organic and Biomolecular Chemistry

  107. Glycosyltransferases of Small Molecules: Their Roles in Plant Biology

    Bowles, D. J. & Lim, E-K., 2010, Encyclopedia of Life Sciences (ELS). John Wiley & Sons

    Research output: Chapter in Book/Report/Conference proceedingChapter

  108. 2009
  109. Control of bud activation by an auxin transport switch

    Prusinkiewicz, P., Crawford, S., Smith, R. S., Ljung, K., Bennett, T., Ongaro, V. & Leyser, O., 13 Oct 2009

    Article in Proceedings of the National Academy of Sciences of the United States of America

  110. Unexpected Preferential Dehydration of Artemisinin in Ionic Liquids

    Sanders, M. W., Wright, L., Tate, L., Fairless, G., Crowhurst, L., Bruce, N. C., Walker, A. J., Hembury, G. A. & Shimizu, S., 24 Sep 2009

    Article in Journal of Physical Chemistry A

  111. Arabinan Metabolism during Seed Development and Germination in Arabidopsis

    Gomez, L. D., Steele-King, C. G., Jones, L., Foster, J. M., Vuttipongchaikij, S. & McQueen-Mason, S. J., Sep 2009

    Article in Molecular plant

  112. Oil accumulation in leaves directed by modification of fatty acid breakdown and lipid synthesis pathways

    Slocombe, S. P., Cornah, J., Pinfield-Wells, H., Soady, K., Zhang, Q., Gilday, A., Dyer, J. M. & Graham, I. A., Sep 2009

    Article in Plant biotechnology journal

  113. The synthesis and accumulation of stearidonic acid in transgenic plants: a novel source of 'heart-healthy' omega-3 fatty acids

    Ruiz-Lopez, N., Haslam, R. P., Venegas-Caleron, M., Larson, T. R., Graham, I. A., Napier, J. A. & Sayanova, O., Sep 2009

    Article in Plant biotechnology journal

  114. The C-Glycosylation of Flavonoids in Cereals

    Brazier-Hicks, M., Evans, K. M., Gershater, M. C., Puschmann, H., Steel, P. G. & Edwards, R., 3 Jul 2009

    Article in Journal of Biological Chemistry

  115. Potential of Jatropha curcas as a source of renewable oil and animal feed

    King, A. J., He, W., Cuevas, J. A., Freudenberger, M., Ramiaramanana, D. & Graham, I. A., Jul 2009

    Article in Journal of Experimental Botany

  116. Priming of plant innate immunity by rhizobacteria and beta-aminobutyric acid: differences and similarities in regulation

    Van der Ent, S., Van Hulten, M., Pozo, M. J., Czechowski, T., Udvardi, M. K., Pieterse, C. M. J. & Ton, J., Jul 2009

    Article in New Phytologist

  117. Global expression analysis of the brown alga Ectocarpus siliculosus (Phaeophyceae) reveals large-scale reprogramming of the transcriptome in response to abiotic stress

    Dittami, S. M., Scornet, D., Petit, J-L., Ségurens, B., Da Silva, C., Corre, E., Dondrup, M., Glatting, K-H., König, R., Sterck, L., Rouzé, P., Van de Peer, Y., Cock, J. M., Boyen, C. & Tonon, T., 2009

    Article in Genome biology

  118. Glycosylation of Secondary Metabolites and Xenobiotics

    Vaistij, F. E., Lim, E-K., Edwards, R. & Bowles, D. J., 2009, PLANT-DERIVED NATURAL PRODUCTS: SYNTHESIS, FUNCTION, AND APPLICATION. Osbourn, A. & Lanzotti, V. (eds.). Springer, p. 209-228

    Research output: Chapter in Book/Report/Conference proceedingChapter

  119. 2008
  120. High-Mach number collisionless shock and photo-ionized non-LTE plasma for laboratory astrophysics with intense lasers

    Takabe, H., Kato, T. N., Sakawa, Y., Kuramitsu, Y., Morita, T., Kadono, T., Shigemori, K., Otani, K., Nagatomo, H., Norimatsu, T., Dono, S., Endo, T., Miyanishi, K., Kimura, T., Shiroshita, A., Ozaki, N., Kodama, R., Fujioka, S., Nishimura, H., Salzman, D. & 27 others, Loupias, B., Gregory, C., Koenig, M., Waugh, J. N., Woolsey, N. C., Kato, D., Li, Y-T., Dong, Q-L., Wang, S-J., Zhang, Y., Zhao, J., Wang, F-L., Wei, H-G., Shi, J-R., Zhao, G., Zhang, J-Y., Wen, T-S., Zhang, W-H., Hu, X., Liu, S-Y., Ding, Y. K., Zhang, L., Tang, Y-J., Zhang, B-H., Zheng, Z-J., Sheng, Z-M. & Zhang, J., Dec 2008

    Article in Plasma Physics and Controlled Fusion

  121. Transcriptomic and Reverse Genetic Analyses of Branched-Chain Fatty Acid and Acyl Sugar Production in Solanum pennellii and Nicotiana benthamiana

    Slocombe, S. P., Schauvinhold, I., McQuinn, R. P., Besser, K., Welsby, N. A., Harper, A. L., Aziz, N., Li, Y., Larson, T. R., Giovannoni, J., Dixon, R. A. & Broun, P., Dec 2008

    Article in Plant Physiology

  122. Getting the most out of publicly available T-DNA insertion lines

    Uelker, B., Peiter, E., Dixon, D. P., Moffat, C., Capper, R., Bouche, N., Edwards, R., Sanders, D., Knight, H. & Knight, M. R., Nov 2008

    Article in Plant Journal

  123. Yield assessment of integument-led seed growth following targeted repair of AUXIN RESPONSE FACTOR 2

    Hughes, R., Spielman, M., Schruff, M. C., Larson, T. R., Graham, I. A. & Scott, R. J., Oct 2008

    Article in Plant biotechnology journal

  124. Enhanced glycosylation with mutants of endohexosaminidase A (Endo A)

    Heidecke, C. D., Ling, Z., Bruce, N. C., Moir, J. W. B., Parsons, T. B. & Fairbanks, A. J., 1 Sep 2008

    Article in Chembiochem

  125. Normalisation genes for expression analyses in the brown alga model Ectocarpus siliculosus

    Le Bail, A., Dittami, S. M., de Franco, P-O., Rousvoal, S., Cock, M. J., Tonon, T. & Charrier, B., 18 Aug 2008

    Article in BMC Molecular Biology

  126. Binding and glutathione conjugation of porphyrinogens by plant glutathione transferases

    Dixon, D. P., Lapthorn, A., Madesis, P., Mudd, E. A., Day, A. & Edwards, R., 18 Jul 2008

    Article in Journal of Biological Chemistry

  127. Eleven golden rules of quantitative RT-PCR

    Udvardi, M. K., Czechowski, T. & Scheible, W-R., Jul 2008

    Letter in The Plant Cell

  128. Engineering a catabolic pathway in plants for the degradation of 1,2-dichloroethane

    Mena-Benitez, G. L., Gandia-Herrero, F., Graham, S., Larson, T. R., McQueen-Mason, S. J., French, C. E., Rylott, E. L. & Bruce, N. C., Jul 2008

    Article in Plant Physiology

  129. New members of the glutathione transferase family discovered in red and brown algae

    Hervé, C., de Franco, P-O., Groisillier, A., Tonon, T. & Boyen, C., 15 Jun 2008

    Article in Biochemical journal

  130. Metabolism of the folate precursor p-aminobenzoate in plants - Glucose ester formation and vacuolar storage

    Eudes, A., Bozzo, G. G., Waller, J. C., Naponelli, V., Lim, E-K., Bowles, D. J., Gregory, J. F. & Hanson, A. D., 30 May 2008

    Article in Journal of Biological Chemistry

  131. Evolution of metal hyperaccumulation required cis-regulatory changes and triplication of HMA4

    Hanikenne, M., Talke, I. N., Haydon, M. J., Lanz, C., Nolte, A., Motte, P., Kroymann, J., Weigel, D. & Krämer, U., 15 May 2008

    Article in Nature

  132. The minimum information about a genome sequence (MIGS) specification

    Field, D., Garrity, G., Gray, T., Morrison, N., Selengut, J., Sterk, P., Tatusova, T., Thomson, N., Allen, M. J., Angiuoli, S. V., Ashburner, M., Axelrod, N., Baldauf, S., Ballard, S., Boore, J., Cochrane, G., Cole, J., Dawyndt, P., De Vos, P., dePamphilis, C. & 52 others, Edwards, R., Faruque, N., Feldman, R., Gilbert, J., Gilna, P., Gloeckner, F. O., Goldstein, P., Guralnick, R., Haft, D., Hancock, D., Hermjakob, H., Hertz-Fowler, C., Hugenholtz, P., Joint, I., Kagan, L., Kane, M., Kennedy, J., Kowalchuk, G., Kottmann, R., Kolker, E., Kravitz, S., Kyrpides, N., Leebens-Mack, J., Lewis, S. E., Li, K., Lister, A. L., Lord, P., Maltsev, N., Markowitz, V., Martiny, J., Methe, B., Mizrachi, I., Moxon, R., Nelson, K., Parkhill, J., Proctor, L., White, O., Sansone, S-A., Spiers, A., Stevens, R., Swift, P., Taylor, C., Tateno, Y., Tett, A., Turner, S., Ussery, D., Vaughan, B., Ward, N., Whetzel, T., Gil, I. S., Wilson, G. & Wipat, A., May 2008

    Article in Nature Biotechnology

  133. Interactions between axillary branches of Arabidopsis

    Ongaro, V., Bainbridge, K., Williamson, L. & Leyser, O., Mar 2008

    Article in Molecular plant

  134. Development and physiology of the brown alga Ectocarpus siliculosus: two centuries of research

    Charrier, B., Coelho, S. M., Le Bail, A., Tonon, T., Michel, G., Potin, P., Kloareg, B., Boyen, C., Peters, A. F. & Cock, J. M., 2008

    Review article in New Phytologist

  135. Glycosylation of secondary metabolites and xenobiotics

    Vaistij, F. E., Edwards, R. & Bowles, D. J., 2008, Plant-derived natural products: synthesis, function and application. Lanzotti, V. & Osbourn, A. (eds.). Springer

    Research output: Chapter in Book/Report/Conference proceedingChapter

  136. 2007
  137. Glutathione

    Foyer, C. H., Gomez, L. D. & Van Heerden, P. D., 12 Nov 2007, Antioxidants and Reactive Oxygen Species in Plants. Blackwell Publishing Ltd., p. 1-24 24 p.

    Research output: Chapter in Book/Report/Conference proceedingChapter

  138. Impact of Transgenic tobacco on trinitrotoluene (TNT) contaminated soil community

    Travis, E. R., Hannink, N. K., Van der Gast, C. J., Thompson, I. P., Rosser, S. J. & Bruce, N. C., 15 Aug 2007

    Article in Environmental science & technology

  139. 2006
  140. Use of the glucosyltransferase UGT71B6 to disturb abscisic acid homeostasis in Arabidopsis thaliana

    Priest, D. M., Ambrose, S. J., Vaistij, F. E., Elias, L., Higgins, G. S., Ross, A. R. S., Abrams, S. R. & Bowles, D. J., May 2006

    Article in Plant Journal

  141. Structure of a flavonoid glucosyltransferase reveals the basis for plant natural product modification

    Offen, W., Martinez-Fleites, C., Yang, M., Kiat-Lim, E., Davis, B. G., Tarling, C. A., Ford, C. M., Bowles, D. J. & Davies, G. J., 22 Mar 2006

    Article in EMBO Journal

  142. An Arabidopsis mutant impaired in coenzyme a biosynthesis is sugar dependent for seedling establishment

    Rubio, S., Larson, T. R., Gonzalez-Guzman, M., Alejandro, S., Graham, I. A., Serrano, R. & Rodriguez, P. L., Mar 2006

    Article in Plant Physiology

  143. NADPH oxidases in Eukaryotes: red algae provide new hints!

    Hervé, C., Tonon, T., Collén, J., Corre, E. & Boyen, C., Mar 2006

    Article in Current genetics

  144. Further investigations into post-completion error: the effects of interruption position and duration

    Li, S. Y. W., Cox, A. L., Blandford, A., Cairns, P., Young, R. M. & Abeles, A., 2006.

    Research output: Contribution to conferencePaper

  145. 2005
  146. Cold and light control seed germination through the bHLH transcription factor SPATULA

    Penfield, S., Josse, E-M., Kannangara, R., Gilday, A. D., Halliday, K. J. & Graham, I. A., Nov 2005

    Article in Current Biology

  147. Purification and characterisation of an antifreeze protein from Forsythia suspensa (L.)

    Simpson, D. J., Smallwood, M., Twigg, S., Doucet, C. J., Ross, J. & Bowles, D. J., Oct 2005

    Article in Cryobiology

  148. The UGT73C5 of Arabidopsis thaliana glucosylates brassinosteroids

    Poppenberger, B., Fujioka, S., Soeno, K., George, G. L., Vaistij, F. E., Hiranuma, S., Seto, H., Takatsuto, S., Adam, G., Yoshida, S. & Bowles, D., Oct 2005

    Article in Proceedings of the National Academy of Sciences of the United States of America

  149. Proton transfer in the oxidative half-reaction of pentaerythritol tetranitrate reductase

    Khan, H., Barna, T., Bruce, N. C., Munro, A. W., Leys, D. & Scrutton, N. S., Sep 2005

    Article in FEBS Journal

  150. Ethylene regulates fast apoplastic acidification and expansin A transcription during submergence-induced petiole elongation in Rumex palustris

    Vreeburg, R. A. M., Benschop, J. J., Peeters, A. J. M., Colmer, T. D., Ammerlaan, A. H. M., Staal, M., Elzenga, T. M., Staals, R. H. J., Darley, C. P., McQueen-Mason, S. J. & Voesenek, L. A. C. J., Aug 2005

    Article in Plant Journal

  151. Fatty acid desaturases from the microalga Thalassiosira pseudonana

    Tonon, T., Sayanova, O., Michaelson, L. V., Qing, R., Harvey, D., Larson, TR., Li, Y., Napier, J. A. & Graham, I. A., Jul 2005

    Article in FEBS Journal

  152. Glycosyltransferases: managers of small molecules

    Bowles, D., Isayenkova, J., Lim, E. K. & Poppenberger, B., Jun 2005

    Literature review in CURRENT OPINION IN PLANT BIOLOGY

  153. Reaction of morphinone reductase with 2-cyclohexen-1-one and 1-nitrocyclohexene

    Messiha, H. L., Munro, A. W., Bruce, N. C., Barsukov, I. & Scrutton, N. S., 18 Mar 2005

    Article in Journal of Biological Chemistry

  154. Resolution of (+)-abscisic acid using an Arabidopsis glycosyltransferase

    Lim, E. K., Doucet, C. J., Hou, B., Jackson, R. G., Abrams, S. R. & Bowles, D. J., 10 Jan 2005

    Article in TETRAHEDRON-ASYMMETRY

  155. 2004
  156. Expansins abundant in secondary xylem belong to subgroup a of the alpha-expansin gene family (1[w])

    Gray-Mitsumune, M., Mellerowicz, E. J., Abe, H., Schrader, J., Winzell, A., Sterky, F., Blomqvist, K., McQueen-Mason, S., Teeri, T. T. & Sundberg, B., Jul 2004

    Article in Plant Physiology

  157. Nomenclature for members of the expansin superfamily of genes and proteins

    Kende, H., Bradford, K. J., Brummell, D. A., Cho, H. T., Cosgrove, D. J., Fleming, A. J., Gehring, C., Lee, Y., McQueen-Mason, S., Rose, J. K. C. & Voesenek, L. A. C. J., May 2004

    Letter in Plant Molecular Biology

  158. P-type ATPase heavy metal transporters with roles in essential zinc homeostasis in Arabidopsis

    Hussain, D., Haydon, M. J., Wang, Y., Wong, E., Sherson, S. M., Young, J., Camakaris, J., Harper, J. F. & Cobbett, C. S., May 2004

    Article in The Plant Cell

  159. 2003
  160. Evolution of substrate recognition across a multigene family of glycosyltransferases in Arabidopsis

    Lim, E. K., Baldauf, S., Li, Y., Elias, L., Worrall, D., Spencer, S. P., Jackson, R. G., Taguchi, G., Ross, J. & Bowles, D. J., Mar 2003

    Article in GLYCOBIOLOGY

  161. Observation of an arsenic adduct in an acetyl esterase crystal structure

    Zhu, X. Y., Larsen, N. A., Basran, A., Bruce, N. C. & Wilson, I. A., 17 Jan 2003

    Article in Journal of Biological Chemistry

  162. 2002
  163. Control of germination and lipid mobilization by COMATOSE, the Arabidopsis homologue of human ALDP

    Footitt, S., Slocombe, S. P., Larner, V., Kurup, S., Wu, Y. S., Larson, T., Graham, I., Baker, A. & Holdsworth, M., 17 Jun 2002

    Article in EMBO Journal

  164. Trehalose-6-phosphate synthase 1, which catalyses the first step in trehalose synthesis, is essential for Arabidopsis embryo maturation

    Eastmond, P. J., van Dijken, A. J. H., Spielman, M., Kerr, A., Tissier, A. F., Dickinson, H. G., Jones, J. D. G., Smeekens, S. C. & Graham, I. A., Jan 2002

    Article in Plant Journal

  165. Phytoremediation of explosives

    Hannink, N. K., Rosser, S. J. & Bruce, N. C., 2002

    Literature review in Critical reviews in plant sciences

  166. 2001
  167. Phytodetoxification of TNT by transgenic plants expressing bacterial nitroreductase

    Hannink, N., French, C. E., Murray, J. A. H., Bruce, N. C., Rosser, S. J., Basran, A. & Nicklin, S., 2001

    Article in Nature Biotechnology

  168. The molecular basis of plant cell wall extension

    Darley, C. P., Forrester, A. M. & McQueen-Mason, S. J., 2001

    Literature review in Plant Molecular Biology

  169. 2000
  170. Stress induces peroxisome biogenesis genes

    Lopez-Huertas, E., Charlton, W. L., Johnson, B., Graham, I. A. & Baker, A., 15 Dec 2000

    Article in EMBO Journal

  171. Promoter trapping of a novel medium-chain acyl-CoA oxidase, which is induced transcriptionally during Arabidopsis seed germination

    Eastmond, P. J., Hooks, M. A., Williams, D., Lange, P., Bechtold, N., Sarrobert, C., Nussaume, L. & Graham, I. A., 3 Nov 2000

    Article in Journal of Biological Chemistry

  172. Limited correlation between expansin gene expression and elongation growth rate

    Caderas, D., Muster, M., Vogler, H., Mandel, T., Rose, J. K. C., McQueen-Mason, S. & Kuhlemeier, C., Aug 2000

    Article in Plant Physiology

  173. 1999
  174. The type II and X cellulose-binding domains of Pseudomonas xylanase A potentiate catalytic activity against complex substrates by a common mechanism

    Gill, J., Rixon, J. E., Bolam, D. N., McQueen-Mason, S., Simpson, P. J., Williamson, M. P., Hazlewood, G. P. & Gilbert, H. J., 1 Sep 1999

    Article in Biochemical journal

  175. Isolation and characterization of a novel antifreeze protein from carrot (Daucus carota)

    Smallwood, M., Worrall, D., Byass, L., Elias, L., Ashford, D., Doucet, C. J., Holt, C., Telford, J., Lillford, P. & Bowles, D. J., 1 Jun 1999

    Article in Biochemical journal

  176. Analysis of expansin-induced morphogenesis on the apical meristem of tomato

    Fleming, A. J., Caderas, D., Wehrli, E., McQueen-Mason, S. & Kuhlemeier, C., Apr 1999

    Article in Planta

  177. 1998
  178. A carrot leucine-rich-repeat protein that inhibits ice recrystallization

    Worrall, D., Elias, L., Ashford, D., Smallwood, M., Sidebottom, C., Lillford, P., Telford, J., Holt, C. & Bowles, D., 2 Oct 1998

    Article in Science

  179. Pseudomonas cellulose-binding domains mediate their effects by increasing enzyme substrate proximity

    Bolam, D. N., Ciruela, A., McQueen-Mason, S., Simpson, P., Williamson, M. P., Rixon, J. E., Boraston, A., Hazlewood, G. P. & Gilbert, H. J., 1 May 1998

    Article in Biochemical journal

  180. 1997
  181. The wound response of tomato plants: analysis of local and long-range signalling events

    Bowles, D. J., 1997, ESSAYS IN BIOCHEMISTRY, VOL 32, 1997. LONDON: PORTLAND PRESS LTD, p. 161-169 9 p.

    Research output: Chapter in Book/Report/Conference proceedingOther chapter contribution

  182. 1996
  183. 1995
  184. 1993
  185. Formal Methods: Use and Relevance for the Development of Safety Critical Systems

    McDermid, J. A. & Bennett, P. A. (ed.), 1993, Safety Aspects of Computer Control. Oxford: Butterworth Heinemann, p. 96-153 58 p.

    Research output: Chapter in Book/Report/Conference proceedingChapter