Search research publications and outputs

  1. 2021
  2. Design of experiments driven optimization of alkaline pretreatment and saccharification for sugarcane bagasse

    Mota, T. R., Oliveira, D. M., Simister, R., Whitehead, C. B., Lanot, A., Dos Santos, W. D., Rezende, C. A., McQueen Mason, S. J. & Gomez, L. D., 1 Feb 2021

    Article in BIORESOURCE TECHNOLOGY

  3. 2020
  4. Selection of a subspecies-specific diterpene gene cluster implicated in rice disease resistance

    Zhan, C., Lei, L., Liu, Z., Zhou, S., Yang, C., Zhu, X., Guo, H., Zhang, F., Peng, M., Zhang, M., Li, Y., Yang, Z., Sun, Y., Shi, Y., Li, K., Liu, L., Shen, S., Wang, X., Li, Y., Czechowski, T. & 9 others, Hasegawa, M., Graham, I. A., Tohge, T., Qu, L., Liu, X., Fernie, A. R., Chen, L-L., Yuan, M. & Luo, J., 7 Dec 2020

    Article in Nature Plants

  5. PsAA9A, a C1-specific AA9 lytic polysaccharide monooxigenase from the white-rot basidiomycete Pycnoporus sanguineus

    Garrido, M. M., Landon, M., Sabbadin, F., Valacco, M. P., Couto, A., Bruce, N. C., Wirth, S. A. & Campos, E., 23 Sep 2020

    Article in APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

  6. Cell wall remodeling under salt stress: Insights into changes in polysaccharides, feruloylation, lignification, and phenolic metabolism in maize

    Oliveira, D. M., Mota, T. R., Salatta, F. V., Sinzker, R. C., Končitíková, R., Kopečný, D., Simister, R., Silva, M., Goeminne, G., Morreel, K., Rencoret, J., Gutiérrez, A., Tryfona, T., Marchiosi, R., Dupree, P., Del Río, J. C., Boerjan, W., McQueen-Mason, S. J., Gomez, L. D., Ferrarese-Filho, O. & 1 others, Dos Santos, W. D., 20 Aug 2020

    Article in Plant, Cell and Environment

  7. Arabidopsis XTH4 and XTH9 contribute to wood cell expansion and secondary wall formation

    Kushwah, S., Banasiak, A., Nishikubo, N., Derba-Maceluch, M., Majda, M., Endo, S., Kumar, V., Gomez, L. D., Gorzsas, A., McQueen Mason, S. J., Braam, J., Sundberg, B. & Mellerowicza, E. J., Apr 2020

    Article in Plant Physiology

  8. 2018
  9. 2016
  10. Genetic diversity of eight millet genera assessed by using molecular and morphological markers

    Dvořáková, Z., Čepková, P. H., Viehmannová, I., Havlicková, L. & Janovská, D., 29 Feb 2016

    Article in Crop and Pasture Science

  11. The genome of the seagrass Zostera marina reveals angiosperm adaptation to the sea

    Olsen, J. L., Rouzé, P., Verhelst, B., Lin, Y-C., Bayer, T., Collen, J., Dattolo, E., De Paoli, E., Dittami, S., Maumus, F., Michel, G., Kersting, A., Lauritano, C., Lohaus, R., Töpel, M., Tonon, T., Vanneste, K., Amirebrahimi, M., Brakel, J., Boström, C. & 15 others, Chovatia, M., Grimwood, J., Jenkins, J. W., Jueterbock, A., Mraz, A., Stam, W. T., Tice, H., Bornberg-Bauer, E., Green, P. J., Pearson, G. A., Procaccini, G., Duarte, C. M., Schmutz, J., Reusch, T. B. H. & Van de Peer, Y., 27 Jan 2016

    Article in Nature

  12. Host-microbe interactions as a driver of acclimation to salinity gradients in brown algal cultures

    Dittami, S. M., Duboscq-Bidot, L., Perennou, M., Gobet, A., Gobet, A., Corre, E., Boyen, C. & Tonon, T., Jan 2016

    Article in The ISME Journal

  13. 2015
  14. Lignocellulose degradation mechanisms across the Tree of Life

    Cragg, S. M., Beckham, G. T., Bruce, N. C., Bugg, T. D. H., Distel, D. L., Dupree, P., Etxabe, A. G., Goodell, B. S., Jellison, J., McGeehan, J. E., McQueen-Mason, S. J., Schnorr, K., Walton, P. H., Watts, J. E. M. & Zimmer, M., Dec 2015

    Review article in Current Opinion in Chemical Biology

  15. Identification of QTL markers contributing to plant growth, oil yield and fatty acid composition in the oilseed crop Jatropha curcas L

    King, A. J., Montes, L., Clarke, J. G., Iztep, J., Perez, C. A. A., Jongschaap, R. E. E., Visser, R. G. F., van Loo, E. & Graham, I. A., 25 Sep 2015

    Article in Biotechnology for biofuels

  16. Morphinan biosynthesis in opium poppy requires a P450-oxidoreductase fusion protein

    Winzer, T. H., Kern, M. F., King, A. J., Larson, TR., Teodor, R. I., Donninger, S., Li, Y., Dowle, A., Cartwright, J., Bates, R., David, A., Thomas, J., Walker, C., Bowser, T. & Graham, I. A., 17 Jul 2015

    Article in Science

  17. Effect of Brassica napus cultivar on cellulosic ethanol yield

    Wood, I. P., Wellner, N., Elliston, A., Wilson, D. R., Bancroft, I. & Waldron, K. W., 11 Jul 2015

    Article in Biotechnology for biofuels

  18. Expression of fungal acetyl xylan esterase in Arabidopsis thaliana improves saccharification of stem lignocellulose.

    Pawar, P. M-A., Derba-Maceluch, M., Chong, S-L., Gomez, L. D., Miedes, E., Ratke, C., Gaertner, C., Mouille, G., McQueen Mason, S. J., Molina, A., Sellstedt, A., Tenkanen, M. & Mellerowicz, E., 11 May 2015

    Article in Plant biotechnology journal

  19. Marine systems biology

    Tonon, T. & Eveillard, D., May 2015

    Editorial in Frontiers in genetics

  20. Monoclonal antibodies directed to fucoidan preparations from brown algae

    Torode, T. A., Marcus, S. E., Jam, M., Tonon, T., Blackburn, R. S., Hervé, C. & Knox, J. P., 18 Feb 2015

    Article in PLoS ONE

  21. Residual biomass saccharification in processing tomato is affected by cultivar and nitrogen fertilization

    Ercolano, M. R., Gomez, L. D., Andolfi, A., Simister, R., Troise, C., Angelino, G., Borrelli, C., McQueen-Mason, S. J., Evidente, A., Frusciante, L. & Caruso, G., Jan 2015

    Article in Biomass & bioenergy

  22. 2014
  23. Side by Side Comparison of Chemical Compounds Generated by Aqueous Pretreatments of Maize Stover, Miscanthus and Sugarcane Bagasse

    Gómez, L. D., Vanholme, R., Bird, S., Goeminne, G., Trindade, L. M., Polikarpov, I., Simister, R., Morreel, K., Boerjan, W. & McQueen Mason, S. J., Dec 2014

    Article in BioEnergy Research

  24. The genome-scale metabolic network of Ectocarpus siliculosus (EctoGEM): a resource to study brown algal physiology and beyond

    Prigent, S., Collet, G., Dittami, S. M., Delage, L., Ethis de Corny, F., Dameron, O., Eveillard, D., Thiele, S., Cambefort, J., Boyen, C., Siegel, A. & Tonon, T., Oct 2014

    Article in The Plant journal

  25. Genome and metabolic network of "Candidatus Phaeomarinobacter ectocarpi" Ec32, a new candidate genus of Alphaproteobacteria frequently associated with brown algae

    Dittami, S. M., Barbeyron, T., Boyen, C., Cambefort, J., Collet, G., Delage, L., Gobet, A., Groisillier, A., Leblanc, C., Michel, G., Scornet, D., Siegel, A., Tapia, J. E. & Tonon, T., 25 Jul 2014

    Article in Frontiers in genetics

  26. Mannitol metabolism in brown algae involves a new phosphatase family

    Groisillier, A., Shao, Z., Michel, G., Goulitquer, S., Bonin, P., Krahulec, S., Nidetzky, B., Duan, D., Boyen, C. & Tonon, T., 1 Feb 2014

    Article in Journal of Experimental Botany

  27. Evaluating the composition and processing potential of novel sources of Brazilian biomass for sustainable biorenewables production

    Lima, M. A., Gomez, L. D., Steele-King, C. G., Simister, R., Bernardinelli, O. D., Carvalho, M. A., Rezende, C. A., Labate, C. A., Deazevedo, E. R., McQueen-Mason, S. J., Polikarpov, I. & McQueen Mason, S. J., 18 Jan 2014

    Article in Biotechnology for biofuels

  28. Chondrus crispus - A present and historical model organism for red seaweeds

    Collén, J., Cornish, M. L., Craigie, J., Ficko-Blean, E., Hervé, C., Krueger-Hadfield, S. A., Leblanc, C., Michel, G., Potin, P., Tonon, T. & Boyen, C., 2014

    Article in Advances in Botanical Research

  29. Effect of a mutagenized acyl‐ACP thioesterase FATA allele from sunflower with improved activity in tobacco leaves and Arabidopsis seeds.

    Moreno-Pérez, A. J., Venegas‐Calerón, M., Vaistij, F. E., Salas, J. J., Larson, T. R., Garcés, R., Graham, I. A. & Martínez-Force, E., 2014

    Article in Planta

  30. 2013
  31. Identification of crop cultivars with consistently high lignocellulosic sugar release requires the use of appropriate statistical design and modelling.

    Oakey, H., Shafiei, R., Comadran, J., Uzrek, N., Cullis, B., Gomez, L., Whitehead, C., McQueen Mason, S. J., Waugh, R. & Halpin, C., 21 Dec 2013

    Article in Biotechnology for biofuels

  32. Different stress responsive strategies to drought and heat in two durum wheat cultivars with contrasting water use efficiency

    Aprile, A., Havlickova, L., Panna, R., Marè, C., Borrelli, G. M., Marone, D., Perrotta, C., Rampino, P., De Bellis, L., Curn, V., Mastrangelo, A. M., Rizza, F. & Cattivelli, L., 22 Nov 2013

    Article in BMC Genomics

  33. An inhibitor of oil body mobilization in Arabidopsis.

    Brown, L-A., Larson, T., Graham, I. A., Hawes, C., Paudyal, R., Warriner, S. & Baker, A., Nov 2013

    Article in New Phytologist

  34. Photosynthetic entrainment of the Arabidopsis thaliana circadian clock

    Haydon, M. J., Mielczarek, O., Robertson, F. C., Hubbard, K. E. & Webb, A. A. R., 31 Oct 2013

    Article in Nature

  35. Genetic diversity of yacon (Smallanthus sonchifolius (Poepp. & Endl.) H. Robinson) and its wild relatives as revealed by ISSR markers

    Svobodová, E., Dvořáková, Z., Čepková, P. H., Viehmannová, I., Havlíčková, L., Cusimamani, E. F., Russo, D. & Meza Zela, G., Oct 2013

    Article in Biochemical systematics and ecology

  36. Linkage mapping in the oilseed crop Jatropha curcas L. reveals a locus controlling the biosynthesis of phorbol esters which cause seed toxicity.

    King, A. J., Montes, L., Clarke, J. G., Affleck, J., Li, Y., Witsenboer, H., van der Vossen, E., van der Linde, P., Tripathi, Y., Tavares, E., Shukla, P., Rajasekaran, T., van Loo, E. & Graham, I. A., Oct 2013

    Article in Plant biotechnology journal

  37. Structural characterization of a unique marine animal family 7 cellobiohydrolase suggests a mechanism of cellulase salt tolerance

    Kern, M., McGeehan, J. E., Streeter, S. D., Martin, R. N. A., Besser, K., Elias, L., Eborall, W., Malyon, G. P., Payne, C. M., Himmel, M. E., Schnorr, K., Beckham, G. T., Cragg, S. M., Bruce, N. C. & McQueen Mason, S. J., 3 Jun 2013

    Article in Proceedings of the National Academy of Sciences of the United States of America

  38. Metabolic regulation of circadian clocks

    Haydon, M. J., Hearn, T. J., Bell, L. J., Hannah, M. A. & Webb, A. A. R., May 2013

    Literature review in Seminars in cell & developmental biology

  39. Key role for a glutathione transferase in multiple-herbicide resistance in grass weeds

    Cummins, I., Wortley, D. J., Sabbadin, F., He, Z., Coxon, C. R., Straker, H. E., Sellars, J. D., Knight, K., Edwards, L., Hughes, D., Kaundun, S. S., Hutchings, S-J., Steel, P. G. & Edwards, R., 9 Apr 2013

    Article in Proceedings of the National Academy of Sciences of the United States of America

  40. Genome structure and metabolic features in the red seaweed Chondrus crispus shed light on evolution of the Archaeplastida

    Collén, J., Porcel, B., Carré, W., Ball, S. G., Chaparro, C., Tonon, T., Barbeyron, T., Michel, G., Noel, B., Valentin, K., Elias, M., Artiguenave, F., Arun, A., Aury, J-M., Barbosa-Neto, J. F., Bothwell, J. H., Bouget, F-Y., Brillet, L., Cabello-Hurtado, F., Capella-Gutiérrez, S. & 38 others, Charrier, B., Cladière, L., Cock, J. M., Coelho, S. M., Colleoni, C., Czjzek, M., Da Silva, C., Delage, L., Denoeud, F., Deschamps, P., Dittami, S. M., Gabaldón, T., Gachon, C. M. M., Groisillier, A., Hervé, C., Jabbari, K., Katinka, M., Kloareg, B., Kowalczyk, N., Labadie, K., Leblanc, C., Lopez, P. J., McLachlan, D. H., Meslet-Cladiere, L., Moustafa, A., Nehr, Z., Nyvall Collén, P., Panaud, O., Partensky, F., Poulain, J., Rensing, S. A., Rousvoal, S., Samson, G., Symeonidi, A., Weissenbach, J., Zambounis, A., Wincker, P. & Boyen, C., 26 Mar 2013

    Article in Proceedings of the National Academy of Sciences of the United States of America

  41. Disrupting the cynnamil alcohol dehydrogenase 1 gene (BdCAD1) leads to altered lignification and improved saccharification in Brachypodium distachyon.

    M.B d'Yvoire, O. Bouchabke-Coussa, W.Voorend, S. Antelme, L. Cezard, F. Legee, P. Lebris, S. Legay, Whitehead, C. B., McQueen Mason, S. J., Gomez, L. D., L. Jouanin, C. Lapierre & R. Sibout, Feb 2013

    Article in Plant Journal

  42. 2012
  43. The Ectocarpus Genome and Brown Algal Genomics. The Ectocarpus Genome Consortium.

    Cock, J. M., Sterck, L., Ahmed, S., Allen, A. E., Amoutzias, G., Anthouard, V., Artiguenave, F., Arun, A., Aury, J. M., Badger, J. H., Beszteri, B., Billiau, K., Bonnet, E., Bothwell, J. H., Bowler, C., Boyen, C., Brownlee, C., Carrano, C. J., Charrier, B., Cho, G. Y. & 64 others, Coelho, S. M., Collén, J., Le Corguillé, G., Corre, E., Dartevelle, L., Da Silva, C., Delage, L., Delaroque, N., Dittami, S. M., Doulbeau, S., Elias, M., Farnham, G., Gachon, C. M. M., Godfroy, O., Gschloessl, B., Heesch, S., Jabbari, K., Jubin, C., Kawai, H., Kimura, K., Kloareg, B., Küpper, F. C., Lang, D., Le Bail, A., Luthringer, R., Leblanc, C., Lerouge, P., Lohr, M., Lopez, P. J., Macaisne, N., Martens, C., Maumus, F., Michel, G., Miranda-Saavedra, D., Morales, J., Moreau, H., Motomura, T., Nagasato, C., Napoli, C. A., Nelson, D. R., Nyvall-Collén, P., Peters, A. F., Pommier, C., Potin, P., Poulain, J., Quesneville, H., Read, B., Rensing, S. A., Ritter, A., Rousvoal, S., Samanta, M., Samson, G., Schroeder, D. C., Scornet, D., Ségurens, B., Strittmatter, M., Tonon, T., Tregear, J. W., Valentin, K., Von Dassow, P., Yamagishi, T., Rouzé, P., Van de Peer, Y. & Wincker, P., 2 Oct 2012

    Article in Advances in Botanical Research

  44. Arabidopsis GT34 family contains five xyloglucan α-1,6-xylosyltransferases.

    McQueen Mason, S. J., Vuttipongchaikij S, Broclehurst D, Steele-King C, Ashford DA, & Gomez LD, Aug 2012

    Article in New Phytologist

  45. Towards deciphering dynamic changes and evolutionary mechanisms involved in the adaptation to low salinities in Ectocarpus (brown algae)

    Dittami, S. M., Gravot, A., Goulitquer, S., Rousvoal, S., Peters, A. F., Bouchereau, A., Boyen, C. & Tonon, T., Aug 2012

    Article in The Plant journal

  46. Role of Plant Laccases in Lignin Polymerization

    Berthet, S., Thevenin, J., Baratiny, D., Demont-Caulet, N., Debeaujon, I., Bidzinski, P., Leple, J. C., Huis, R., Hawkins, S., Gomez, L. D., Lapierre, C. & Jouanin, L., 14 Jun 2012

    Article in Advances in Botanical Research

  47. Reduced expression of FatA thioesterases in Arabidopsis affects the oil content and fatty acid composition of the seeds

    Moreno-Perez, AJ., Venegas-Caleron, M., Vaistij, F. E., Salas, JJ., Larson, TR., Garces, R., Graham, I. A. & Martinez-Force, E., Mar 2012

    Article in Planta

  48. Factors limiting the synthesis of virgin olive oil volatile esters

    Sanchez-Ortiz, A., Romero-Segura, C., Gazda, V., Graham, I. A., Sanz, C. & Perez, AG., 8 Feb 2012

    Article in Journal of Agricultural and Food Chemistry

  49. Tissue-Specific Whole Transcriptome Sequencing in Castor, Directed at Understanding Triacylglycerol Lipid Biosynthetic Pathways

    Brown, A. P., Kroon, J. T. M., Swarbreck, D., Febrer, M., Larson, T. R., Graham, I. A., Caccamo, M. & Slabas, A. R., 3 Feb 2012

    Article in PLoS ONE

  50. Rosiglitazone increases fatty acid Δ9-desaturation and decreases elongase activity index in human skeletal muscle in vivo

    Mai, K., Andres, J., Bobbert, T., Assmann, T., Biedasek, K., Diederich, S., Graham, I. A., Larson, T. R., Pfeiffer, AF. & Spranger, J., Jan 2012

    Article in Metabolism

  51. 2011
  52. Toward systems biology in brown algae to explore acclimation and adaptation to the shore environment

    Tonon, T., Eveillard, D., Prigent, S., Bourdon, J., Potin, P., Boyen, C. & Siegel, A., Dec 2011

    Review article in Omics : a journal of integrative biology

  53. High throughput discovery of heteroaromatic-modifying enzymes allows enhancement of novobiocin selectivity

    Patel, S. M., de la Fuente, M., Ke, S., Guimaraes, A. M. R., Oliyide, A. O., Ji, X., Stapleton, P., Osbourn, A., Pan, Y., Bowles, D. J., Davis, B. G., Schatzlein, A. & Yang, M., 14 Oct 2011

    Article in Chemical Communications

  54. Mannitol in six autotrophic stramenopiles and Micromonas

    Dittami, S. M., Aas, H. T. N., Paulsen, B. S., Boyen, C., Edvardsen, B. & Tonon, T., Aug 2011

    Article in Plant Signaling and Behavior

  55. Multiple roles for plant glutathione transferases in xenobiotic detoxification.

    Edwards, R., Cummins, I., Dixon, D.P, Freitag-Pohl, S. & Skipsey, M., May 2011

    Article in Drug metabolism reviews

  56. A DELLA in Disguise: SPATULA Restrains the Growth of the Developing Arabidopsis Seedling

    Josse, E-M., Gan, Y., Bou-Torrent, J., Stewart, K. L., Gilday, A. D., Jeffree, C. E., Vaistij, F. E., Martinez-Garcia, J. F., Nagy, F., Graham, I. A. & Halliday, K. J., Apr 2011

    Article in The Plant Cell

  57. The circadian oscillator gene GIGANTEA mediates a long-term response of the Arabidopsis thaliana circadian clock to sucrose

    Dalchau, N., Baek, S. J., Briggs, H. M., Robertson, F. C., Dodd, A. N., Gardner, M. J., Stancombe, M. A., Haydon, M. J., Stan, G-B., Gonçalves, J. M. & Webb, A. A. R., 22 Mar 2011

    Article in Proceedings of the National Academy of Sciences of the United States of America

  58. Cloning, tissue expression analysis, and functional characterization of two Δ6-desaturase variants of sea bass (Dicentrarchus labrax L.)

    Santigosa, E., Geay, F., Tonon, T., Le Delliou, H., Kuhl, H., Reinhardt, R., Corcos, L., Cahu, C., Zambonino-Infante, J. L. & Mazurais, D., Feb 2011

    Article in Marine biotechnology (New York, N.Y.)

  59. Mannitol-1-phosphate dehydrogenase activity in Ectocarpus siliculosus, a key role for mannitol synthesis in brown algae

    Rousvoal, S., Groisillier, A., Dittami, S. M., Michel, G., Boyen, C. & Tonon, T., Feb 2011

    Article in Planta

  60. Microarray estimation of genomic inter-strain variability in the genus Ectocarpus (Phaeophyceae)

    Dittami, S. M., Proux, C., Rousvoal, S., Peters, A. F., Cock, J. M., Coppée, J-Y., Boyen, C. & Tonon, T., 13 Jan 2011

    Article in BMC Molecular Biology

  61. Conserved cysteine residues in the mammalian lamin A tail are essential for cellular resposes to ROS generation.

    Edwards, R., Pekovic,V., Gibbs-Seymour, I., Markiewicz, E., Alzoghaibi, F., Benham, A.M, Wenhert, M., von Zglinicki, T. & Hutchison, C.J, 2011

    Article in Aging Cell

  62. 2010
  63. Diurnal oscillations of metabolite abundances and gene analysis provide new insights into central metabolic processes of the brown alga Ectocarpus siliculosus

    Gravot, A., Dittami, S. M., Rousvoal, S., Lugan, R., Eggert, A., Collén, J., Boyen, C., Bouchereau, A. & Tonon, T., Oct 2010

    Article in The New phytologist

  64. SPATULA links daytime temperature and plant growth rate

    Sidaway-Lee, K., Josse, E-M., Brown, A., Gan, Y., Halliday, K., Graham, I. A. & Penfield, S., 24 Aug 2010

    Article in Current Biology

  65. Hydrophilicity, the major determining factor influencing the solvation environment of protic ionic liquids

    Wright, L., Sanders, M. W., Tate, L., Fairless, G., Crowhurst, L., Bruce, N. C., Walker, A. J., Hembury, G. A. & Shimizu, S., 21 Aug 2010

    Article in Physical Chemistry Chemical Physics

  66. Potassium deficiency induces the biosynthesis of oxylipins and glucosinolates in Arabidopsis thaliana

    Troufflard, S., Mullen, W., Larson, T. R., Graham, I. A., Crozier, A., Amtmann, A. & Armengaud, P., 11 Aug 2010

    Article in BMC Plant Biology

  67. Enhancement of Plant Metabolite Fingerprinting by Machine Learning

    Scott, I. M., Vermeer, C. P., Liakata, M., Corol, D. I., Ward, J. L., Lin, W., Johnson, H. E., Whitehead, L., Kular, B., Baker, J. M., Walsh, S., Dave, A., Larson, T. R., Graham, I. A., Wang, T. L., King, R. D., Draper, J. & Beale, M. H., Aug 2010

    Article in Plant Physiology

  68. The Ectocarpus genome and the independent evolution of multicellularity in brown algae

    Cock, J. M., Sterck, L., Rouzé, P., Scornet, D., Allen, A. E., Amoutzias, G., Anthouard, V., Artiguenave, F., Aury, J-M., Badger, J. H., Beszteri, B., Billiau, K., Bonnet, E., Bothwell, J. H., Bowler, C., Boyen, C., Brownlee, C., Carrano, C. J., Charrier, B., Cho, G. Y. & 57 others, Coelho, S. M., Collén, J., Corre, E., Da Silva, C., Delage, L., Delaroque, N., Dittami, S. M., Doulbeau, S., Elias, M., Farnham, G., Gachon, C. M. M., Gschloessl, B., Heesch, S., Jabbari, K., Jubin, C., Kawai, H., Kimura, K., Kloareg, B., Küpper, F. C., Lang, D., Le Bail, A., Leblanc, C., Lerouge, P., Lohr, M., Lopez, P. J., Martens, C., Maumus, F., Michel, G., Miranda-Saavedra, D., Morales, J., Moreau, H., Motomura, T., Nagasato, C., Napoli, C. A., Nelson, D. R., Nyvall-Collén, P., Peters, A. F., Pommier, C., Potin, P., Poulain, J., Quesneville, H., Read, B., Rensing, S. A., Ritter, A., Rousvoal, S., Samanta, M., Samson, G., Schroeder, D. C., Ségurens, B., Strittmatter, M., Tonon, T., Tregear, J. W., Valentin, K., von Dassow, P., Yamagishi, T., Van de Peer, Y. & Wincker, P., 3 Jun 2010

    Article in Nature

  69. Copper stress proteomics highlights local adaptation of two strains of the model brown alga Ectocarpus siliculosus

    Ritter, A., Ubertini, M., Romac, S., Gaillard, F., Delage, L., Mann, A., Cock, J. M., Tonon, T., Correa, J. A. & Potin, P., Jun 2010

    Article in Proteomics

  70. LICRED: A Versatile Drop-In Vector for Rapid Generation of Redox-Self-Sufficient Cytochrome P450s

    Sabbadin, F., Hyde, R., Robin, A., Hilgarth, E-M., Delenne, M., Flitsch, S., Turner, N., Grogan, G. & Bruce, N. C., 3 May 2010

    Article in Chembiochem

  71. BODIPY probes to study peroxisome dynamics in vivo.

    Edwards, R., Landrum, M., Smertenko, A., Hussey, P.J & Steel, P.G, May 2010

    Article in Plant Journal

  72. Identification of the 2-Hydroxyglutarate and Isovaleryl-CoA Dehydrogenases as Alternative Electron Donors Linking Lysine Catabolism to the Electron Transport Chain of Arabidopsis Mitochondria

    Araujo, W. L., Ishizaki, K., Nunes-Nesi, A., Larson, T. R., Tohge, T., Krahnert, I., Witt, S., Obata, T., Schauer, N., Graham, I. A., Leaver, C. J. & Fernie, A. R., May 2010

    Article in The Plant Cell

  73. Toxicity of unsaturated fatty acids to the biohydrogenating ruminal bacterium, Butyrivibrio fibrisolvens

    Maia, M. R. G., Chaudhary, L. C., Bestwick, C. S., Richardson, A. J., McKain, N., Larson, T. R., Graham, I. A. & Wallace, R. J., 18 Feb 2010

    Article in Bmc microbiology

  74. Expansins expression is associated with grain size dynamics in wheat (Triticum aestivum L.)

    McQueen Mason, S. J., Lizana, X. C., Riegel, R., Gomez, L. D., Herrera, J., Isla, A. & Calderini, D. F., Feb 2010

    Article in Journal of Experimental Botany

  75. The genetic map of Artemisia annua L. identifies multiple loci affecting yield of the antimalarial drug artemisinin

    Graham, I. A., Besser, K., Blumer, S., Branigan, C. A., Czechowski, T., Elias, L., Guterman, I., Harvey, D., Isaac, P. G., Khan, A. M., Larson, T. R., Li, Y., Pawson, T., Penfield, T., Rae, A. M., Rathbone, D. A., Reid, S., Ross, J., Smallwood, M. F., Segura, V. & 4 others, Townsend, T., Vyas, D., Winzer, T. & Bowles, D., 15 Jan 2010

    Article in Science

  76. Fluorescence quenched quinone methide based activity probes-a cautionary tale.

    Edwards, R., Sellars, J.D, Landrum, M., Congreve, A., Dixon, D.P, Moseley, J.A, Beeby, A. & Steel, P.G, 2010

    Article in Organic and Biomolecular Chemistry

  77. 2009
  78. Control of bud activation by an auxin transport switch

    Prusinkiewicz, P., Crawford, S., Smith, R. S., Ljung, K., Bennett, T., Ongaro, V. & Leyser, O., 13 Oct 2009

    Article in Proceedings of the National Academy of Sciences of the United States of America

  79. Unexpected Preferential Dehydration of Artemisinin in Ionic Liquids

    Sanders, M. W., Wright, L., Tate, L., Fairless, G., Crowhurst, L., Bruce, N. C., Walker, A. J., Hembury, G. A. & Shimizu, S., 24 Sep 2009

    Article in Journal of Physical Chemistry A

  80. Arabinan Metabolism during Seed Development and Germination in Arabidopsis

    Gomez, L. D., Steele-King, C. G., Jones, L., Foster, J. M., Vuttipongchaikij, S. & McQueen-Mason, S. J., Sep 2009

    Article in Molecular plant

  81. Oil accumulation in leaves directed by modification of fatty acid breakdown and lipid synthesis pathways

    Slocombe, S. P., Cornah, J., Pinfield-Wells, H., Soady, K., Zhang, Q., Gilday, A., Dyer, J. M. & Graham, I. A., Sep 2009

    Article in Plant biotechnology journal

  82. The synthesis and accumulation of stearidonic acid in transgenic plants: a novel source of 'heart-healthy' omega-3 fatty acids

    Ruiz-Lopez, N., Haslam, R. P., Venegas-Caleron, M., Larson, T. R., Graham, I. A., Napier, J. A. & Sayanova, O., Sep 2009

    Article in Plant biotechnology journal

  83. The C-Glycosylation of Flavonoids in Cereals

    Brazier-Hicks, M., Evans, K. M., Gershater, M. C., Puschmann, H., Steel, P. G. & Edwards, R., 3 Jul 2009

    Article in Journal of Biological Chemistry

  84. Potential of Jatropha curcas as a source of renewable oil and animal feed

    King, A. J., He, W., Cuevas, J. A., Freudenberger, M., Ramiaramanana, D. & Graham, I. A., Jul 2009

    Article in Journal of Experimental Botany

  85. Priming of plant innate immunity by rhizobacteria and beta-aminobutyric acid: differences and similarities in regulation

    Van der Ent, S., Van Hulten, M., Pozo, M. J., Czechowski, T., Udvardi, M. K., Pieterse, C. M. J. & Ton, J., Jul 2009

    Article in New Phytologist

  86. Global expression analysis of the brown alga Ectocarpus siliculosus (Phaeophyceae) reveals large-scale reprogramming of the transcriptome in response to abiotic stress

    Dittami, S. M., Scornet, D., Petit, J-L., Ségurens, B., Da Silva, C., Corre, E., Dondrup, M., Glatting, K-H., König, R., Sterck, L., Rouzé, P., Van de Peer, Y., Cock, J. M., Boyen, C. & Tonon, T., 2009

    Article in Genome biology

  87. 2008
  88. High-Mach number collisionless shock and photo-ionized non-LTE plasma for laboratory astrophysics with intense lasers

    Takabe, H., Kato, T. N., Sakawa, Y., Kuramitsu, Y., Morita, T., Kadono, T., Shigemori, K., Otani, K., Nagatomo, H., Norimatsu, T., Dono, S., Endo, T., Miyanishi, K., Kimura, T., Shiroshita, A., Ozaki, N., Kodama, R., Fujioka, S., Nishimura, H., Salzman, D. & 27 others, Loupias, B., Gregory, C., Koenig, M., Waugh, J. N., Woolsey, N. C., Kato, D., Li, Y-T., Dong, Q-L., Wang, S-J., Zhang, Y., Zhao, J., Wang, F-L., Wei, H-G., Shi, J-R., Zhao, G., Zhang, J-Y., Wen, T-S., Zhang, W-H., Hu, X., Liu, S-Y., Ding, Y. K., Zhang, L., Tang, Y-J., Zhang, B-H., Zheng, Z-J., Sheng, Z-M. & Zhang, J., Dec 2008

    Article in Plasma Physics and Controlled Fusion

  89. Transcriptomic and Reverse Genetic Analyses of Branched-Chain Fatty Acid and Acyl Sugar Production in Solanum pennellii and Nicotiana benthamiana

    Slocombe, S. P., Schauvinhold, I., McQuinn, R. P., Besser, K., Welsby, N. A., Harper, A. L., Aziz, N., Li, Y., Larson, T. R., Giovannoni, J., Dixon, R. A. & Broun, P., Dec 2008

    Article in Plant Physiology

  90. Getting the most out of publicly available T-DNA insertion lines

    Uelker, B., Peiter, E., Dixon, D. P., Moffat, C., Capper, R., Bouche, N., Edwards, R., Sanders, D., Knight, H. & Knight, M. R., Nov 2008

    Article in Plant Journal

  91. Yield assessment of integument-led seed growth following targeted repair of AUXIN RESPONSE FACTOR 2

    Hughes, R., Spielman, M., Schruff, M. C., Larson, T. R., Graham, I. A. & Scott, R. J., Oct 2008

    Article in Plant biotechnology journal

  92. Enhanced glycosylation with mutants of endohexosaminidase A (Endo A)

    Heidecke, C. D., Ling, Z., Bruce, N. C., Moir, J. W. B., Parsons, T. B. & Fairbanks, A. J., 1 Sep 2008

    Article in Chembiochem

  93. Normalisation genes for expression analyses in the brown alga model Ectocarpus siliculosus

    Le Bail, A., Dittami, S. M., de Franco, P-O., Rousvoal, S., Cock, M. J., Tonon, T. & Charrier, B., 18 Aug 2008

    Article in BMC Molecular Biology

  94. Binding and glutathione conjugation of porphyrinogens by plant glutathione transferases

    Dixon, D. P., Lapthorn, A., Madesis, P., Mudd, E. A., Day, A. & Edwards, R., 18 Jul 2008

    Article in Journal of Biological Chemistry

  95. Eleven golden rules of quantitative RT-PCR

    Udvardi, M. K., Czechowski, T. & Scheible, W-R., Jul 2008

    Letter in The Plant Cell

  96. Engineering a catabolic pathway in plants for the degradation of 1,2-dichloroethane

    Mena-Benitez, G. L., Gandia-Herrero, F., Graham, S., Larson, T. R., McQueen-Mason, S. J., French, C. E., Rylott, E. L. & Bruce, N. C., Jul 2008

    Article in Plant Physiology

  97. New members of the glutathione transferase family discovered in red and brown algae

    Hervé, C., de Franco, P-O., Groisillier, A., Tonon, T. & Boyen, C., 15 Jun 2008

    Article in Biochemical journal

  98. Metabolism of the folate precursor p-aminobenzoate in plants - Glucose ester formation and vacuolar storage

    Eudes, A., Bozzo, G. G., Waller, J. C., Naponelli, V., Lim, E-K., Bowles, D. J., Gregory, J. F. & Hanson, A. D., 30 May 2008

    Article in Journal of Biological Chemistry

  99. Evolution of metal hyperaccumulation required cis-regulatory changes and triplication of HMA4

    Hanikenne, M., Talke, I. N., Haydon, M. J., Lanz, C., Nolte, A., Motte, P., Kroymann, J., Weigel, D. & Krämer, U., 15 May 2008

    Article in Nature

  100. The minimum information about a genome sequence (MIGS) specification

    Field, D., Garrity, G., Gray, T., Morrison, N., Selengut, J., Sterk, P., Tatusova, T., Thomson, N., Allen, M. J., Angiuoli, S. V., Ashburner, M., Axelrod, N., Baldauf, S., Ballard, S., Boore, J., Cochrane, G., Cole, J., Dawyndt, P., De Vos, P., dePamphilis, C. & 52 others, Edwards, R., Faruque, N., Feldman, R., Gilbert, J., Gilna, P., Gloeckner, F. O., Goldstein, P., Guralnick, R., Haft, D., Hancock, D., Hermjakob, H., Hertz-Fowler, C., Hugenholtz, P., Joint, I., Kagan, L., Kane, M., Kennedy, J., Kowalchuk, G., Kottmann, R., Kolker, E., Kravitz, S., Kyrpides, N., Leebens-Mack, J., Lewis, S. E., Li, K., Lister, A. L., Lord, P., Maltsev, N., Markowitz, V., Martiny, J., Methe, B., Mizrachi, I., Moxon, R., Nelson, K., Parkhill, J., Proctor, L., White, O., Sansone, S-A., Spiers, A., Stevens, R., Swift, P., Taylor, C., Tateno, Y., Tett, A., Turner, S., Ussery, D., Vaughan, B., Ward, N., Whetzel, T., Gil, I. S., Wilson, G. & Wipat, A., May 2008

    Article in Nature Biotechnology

  101. Interactions between axillary branches of Arabidopsis

    Ongaro, V., Bainbridge, K., Williamson, L. & Leyser, O., Mar 2008

    Article in Molecular plant

  102. Development and physiology of the brown alga Ectocarpus siliculosus: two centuries of research

    Charrier, B., Coelho, S. M., Le Bail, A., Tonon, T., Michel, G., Potin, P., Kloareg, B., Boyen, C., Peters, A. F. & Cock, J. M., 2008

    Review article in New Phytologist

  103. 2007
  104. Impact of Transgenic tobacco on trinitrotoluene (TNT) contaminated soil community

    Travis, E. R., Hannink, N. K., Van der Gast, C. J., Thompson, I. P., Rosser, S. J. & Bruce, N. C., 15 Aug 2007

    Article in Environmental science & technology

  105. 2006
  106. Use of the glucosyltransferase UGT71B6 to disturb abscisic acid homeostasis in Arabidopsis thaliana

    Priest, D. M., Ambrose, S. J., Vaistij, F. E., Elias, L., Higgins, G. S., Ross, A. R. S., Abrams, S. R. & Bowles, D. J., May 2006

    Article in Plant Journal

  107. Structure of a flavonoid glucosyltransferase reveals the basis for plant natural product modification

    Offen, W., Martinez-Fleites, C., Yang, M., Kiat-Lim, E., Davis, B. G., Tarling, C. A., Ford, C. M., Bowles, D. J. & Davies, G. J., 22 Mar 2006

    Article in EMBO Journal

  108. An Arabidopsis mutant impaired in coenzyme a biosynthesis is sugar dependent for seedling establishment

    Rubio, S., Larson, T. R., Gonzalez-Guzman, M., Alejandro, S., Graham, I. A., Serrano, R. & Rodriguez, P. L., Mar 2006

    Article in Plant Physiology

  109. NADPH oxidases in Eukaryotes: red algae provide new hints!

    Hervé, C., Tonon, T., Collén, J., Corre, E. & Boyen, C., Mar 2006

    Article in Current genetics

  110. 2005
  111. Cold and light control seed germination through the bHLH transcription factor SPATULA

    Penfield, S., Josse, E-M., Kannangara, R., Gilday, A. D., Halliday, K. J. & Graham, I. A., Nov 2005

    Article in Current Biology

  112. Purification and characterisation of an antifreeze protein from Forsythia suspensa (L.)

    Simpson, D. J., Smallwood, M., Twigg, S., Doucet, C. J., Ross, J. & Bowles, D. J., Oct 2005

    Article in Cryobiology

  113. The UGT73C5 of Arabidopsis thaliana glucosylates brassinosteroids

    Poppenberger, B., Fujioka, S., Soeno, K., George, G. L., Vaistij, F. E., Hiranuma, S., Seto, H., Takatsuto, S., Adam, G., Yoshida, S. & Bowles, D., Oct 2005

    Article in Proceedings of the National Academy of Sciences of the United States of America

  114. Proton transfer in the oxidative half-reaction of pentaerythritol tetranitrate reductase

    Khan, H., Barna, T., Bruce, N. C., Munro, A. W., Leys, D. & Scrutton, N. S., Sep 2005

    Article in FEBS Journal

  115. Ethylene regulates fast apoplastic acidification and expansin A transcription during submergence-induced petiole elongation in Rumex palustris

    Vreeburg, R. A. M., Benschop, J. J., Peeters, A. J. M., Colmer, T. D., Ammerlaan, A. H. M., Staal, M., Elzenga, T. M., Staals, R. H. J., Darley, C. P., McQueen-Mason, S. J. & Voesenek, L. A. C. J., Aug 2005

    Article in Plant Journal

  116. Fatty acid desaturases from the microalga Thalassiosira pseudonana

    Tonon, T., Sayanova, O., Michaelson, L. V., Qing, R., Harvey, D., Larson, TR., Li, Y., Napier, J. A. & Graham, I. A., Jul 2005

    Article in FEBS Journal

  117. Glycosyltransferases: managers of small molecules

    Bowles, D., Isayenkova, J., Lim, E. K. & Poppenberger, B., Jun 2005

    Literature review in CURRENT OPINION IN PLANT BIOLOGY

  118. Reaction of morphinone reductase with 2-cyclohexen-1-one and 1-nitrocyclohexene

    Messiha, H. L., Munro, A. W., Bruce, N. C., Barsukov, I. & Scrutton, N. S., 18 Mar 2005

    Article in Journal of Biological Chemistry

  119. Resolution of (+)-abscisic acid using an Arabidopsis glycosyltransferase

    Lim, E. K., Doucet, C. J., Hou, B., Jackson, R. G., Abrams, S. R. & Bowles, D. J., 10 Jan 2005

    Article in TETRAHEDRON-ASYMMETRY

  120. 2004
  121. Expansins abundant in secondary xylem belong to subgroup a of the alpha-expansin gene family (1[w])

    Gray-Mitsumune, M., Mellerowicz, E. J., Abe, H., Schrader, J., Winzell, A., Sterky, F., Blomqvist, K., McQueen-Mason, S., Teeri, T. T. & Sundberg, B., Jul 2004

    Article in Plant Physiology

  122. Nomenclature for members of the expansin superfamily of genes and proteins

    Kende, H., Bradford, K. J., Brummell, D. A., Cho, H. T., Cosgrove, D. J., Fleming, A. J., Gehring, C., Lee, Y., McQueen-Mason, S., Rose, J. K. C. & Voesenek, L. A. C. J., May 2004

    Letter in Plant Molecular Biology

  123. P-type ATPase heavy metal transporters with roles in essential zinc homeostasis in Arabidopsis

    Hussain, D., Haydon, M. J., Wang, Y., Wong, E., Sherson, S. M., Young, J., Camakaris, J., Harper, J. F. & Cobbett, C. S., May 2004

    Article in The Plant Cell

  124. 2003
  125. Evolution of substrate recognition across a multigene family of glycosyltransferases in Arabidopsis

    Lim, E. K., Baldauf, S., Li, Y., Elias, L., Worrall, D., Spencer, S. P., Jackson, R. G., Taguchi, G., Ross, J. & Bowles, D. J., Mar 2003

    Article in GLYCOBIOLOGY

  126. Observation of an arsenic adduct in an acetyl esterase crystal structure

    Zhu, X. Y., Larsen, N. A., Basran, A., Bruce, N. C. & Wilson, I. A., 17 Jan 2003

    Article in Journal of Biological Chemistry

  127. 2002
  128. Control of germination and lipid mobilization by COMATOSE, the Arabidopsis homologue of human ALDP

    Footitt, S., Slocombe, S. P., Larner, V., Kurup, S., Wu, Y. S., Larson, T., Graham, I., Baker, A. & Holdsworth, M., 17 Jun 2002

    Article in EMBO Journal

  129. Trehalose-6-phosphate synthase 1, which catalyses the first step in trehalose synthesis, is essential for Arabidopsis embryo maturation

    Eastmond, P. J., van Dijken, A. J. H., Spielman, M., Kerr, A., Tissier, A. F., Dickinson, H. G., Jones, J. D. G., Smeekens, S. C. & Graham, I. A., Jan 2002

    Article in Plant Journal

  130. Phytoremediation of explosives

    Hannink, N. K., Rosser, S. J. & Bruce, N. C., 2002

    Literature review in Critical reviews in plant sciences

  131. 2001
  132. Phytodetoxification of TNT by transgenic plants expressing bacterial nitroreductase

    Hannink, N., French, C. E., Murray, J. A. H., Bruce, N. C., Rosser, S. J., Basran, A. & Nicklin, S., 2001

    Article in Nature Biotechnology

  133. The molecular basis of plant cell wall extension

    Darley, C. P., Forrester, A. M. & McQueen-Mason, S. J., 2001

    Literature review in Plant Molecular Biology

  134. 2000
  135. Stress induces peroxisome biogenesis genes

    Lopez-Huertas, E., Charlton, W. L., Johnson, B., Graham, I. A. & Baker, A., 15 Dec 2000

    Article in EMBO Journal

  136. Promoter trapping of a novel medium-chain acyl-CoA oxidase, which is induced transcriptionally during Arabidopsis seed germination

    Eastmond, P. J., Hooks, M. A., Williams, D., Lange, P., Bechtold, N., Sarrobert, C., Nussaume, L. & Graham, I. A., 3 Nov 2000

    Article in Journal of Biological Chemistry

  137. Limited correlation between expansin gene expression and elongation growth rate

    Caderas, D., Muster, M., Vogler, H., Mandel, T., Rose, J. K. C., McQueen-Mason, S. & Kuhlemeier, C., Aug 2000

    Article in Plant Physiology

  138. 1999
  139. The type II and X cellulose-binding domains of Pseudomonas xylanase A potentiate catalytic activity against complex substrates by a common mechanism

    Gill, J., Rixon, J. E., Bolam, D. N., McQueen-Mason, S., Simpson, P. J., Williamson, M. P., Hazlewood, G. P. & Gilbert, H. J., 1 Sep 1999

    Article in Biochemical journal

  140. Isolation and characterization of a novel antifreeze protein from carrot (Daucus carota)

    Smallwood, M., Worrall, D., Byass, L., Elias, L., Ashford, D., Doucet, C. J., Holt, C., Telford, J., Lillford, P. & Bowles, D. J., 1 Jun 1999

    Article in Biochemical journal

  141. Analysis of expansin-induced morphogenesis on the apical meristem of tomato

    Fleming, A. J., Caderas, D., Wehrli, E., McQueen-Mason, S. & Kuhlemeier, C., Apr 1999

    Article in Planta

  142. 1998
  143. A carrot leucine-rich-repeat protein that inhibits ice recrystallization

    Worrall, D., Elias, L., Ashford, D., Smallwood, M., Sidebottom, C., Lillford, P., Telford, J., Holt, C. & Bowles, D., 2 Oct 1998

    Article in Science

  144. Pseudomonas cellulose-binding domains mediate their effects by increasing enzyme substrate proximity

    Bolam, D. N., Ciruela, A., McQueen-Mason, S., Simpson, P., Williamson, M. P., Rixon, J. E., Boraston, A., Hazlewood, G. P. & Gilbert, H. J., 1 May 1998

    Article in Biochemical journal

  145. 1996
  146. 1995