Search research publications and outputs

  1. 2020
  2. Transcriptomics predicts compound synergy in drug and natural product treated glioblastoma cells

    Pruteanu, L-L., Kopanitsa, L., Módos, D., Kletnieks, E., Samarova, E., Bender, A., Gomez, L. D. & Bailey, D. S., 18 Sep 2020

    Article in PLoS ONE

  3. Leishmania differentiation requires ubiquitin conjugation mediated by a UBC2-UEV1 E2 complex

    Burge, R., Damianou, A., Wilkinson, A. J., Rodenko, B. & Mottram, J. C., 10 Sep 2020, (Accepted/In press)

    Article in PLOS PATHOGENS

  4. Deep convergence, shared ancestry and evolutionary novelty in the genetic architecture of heliconius mimicry

    Morris, J., Hanly, J. J., Martin, S. H., Van Belleghem, S. M., Salazar, C., Jiggins, C. D. & Dasmahapatra, K. K., 3 Sep 2020

    Article in Genetics

  5. The Mechanism of Vesicle Solubilization by the Detergent Sodium Dodecyl Sulfate

    Juan-Colas, J., Dresser, L., Morris, K., Lagadou, H., Ward, R. H., Burns, A., Tear, S., Johnson, S. D., Leake, M. C. & Quinn, S., 1 Sep 2020, (Accepted/In press)

    Article in Langmuir

  6. A curated list of genes that affect the plant ionome

    Whitt, L., Ricachenevsky, F. K., Ziegler, G., Clemens, S., Walker, E., Maathuis, F., Kear, P. & Baxter, I., 28 Aug 2020, (Accepted/In press)

    Article in Plant Direct

  7. Identification of mesenchymal stromal cell survival responses to antimicrobial silver ion concentrations released from orthopaedic implants

    Souter, P., Vaughan, J., Butcher, K., Dowle, A., Cunningham, J. C., Dodd, J., Hall, M., Wilson, D., Horner, A. & Genever, P., 27 Aug 2020, (Accepted/In press)

    Article in Scientific Reports

  8. A Salmochelin S4-inspired Ciprofloxacin Trojan Horse Conjugate

    Sanderson, T., Black, C., Southwell, J., Wilde, E., Pandey, A., Herman, R., Thomas, G. H., Boros, E., Duhme-Klair, A. K. & Routledge, A., 25 Aug 2020

    Article in ACS Infectious Diseases

  9. Elevational specialization and the monitoring of the effects of climate change in insects: beetles in a Brazilian rainforest mountain

    Colares, C., Roza, A. S., Mermudes, J. R. M., da Silveira, L. F. L., Khattar, G., Mayhew, P. J., Monteiro, R. F., Nunes, M. F. S. Q. C. & Macedo, M. V., 25 Aug 2020, (Accepted/In press)

    Article in Ecological Indicators

  10. STAT3 inhibition with Galiellalactone effectively targets the prostate cancer stem-like cell population."

    Canesin, G., Maggio, V., Palominos, M., Stiehm, A., Contreras, H. R., Castellón, E. A., Morote, J., Paciucci, R., Maitland, N. J., Bjartell, A. & Hellsten, R., 18 Aug 2020

    Article in Scientific Reports

  11. A high-contiguity Brassica nigra genome localizes active centromeres and defines the ancestral Brassica genome

    Sampath, P., Koh, C. S., Jin, L., Buchwaldt, M., Higgins, E. E., Zheng, C., Sankoff, D., Robinson, S. J., Kagale, S., Navabi, Z-K., Tang, L., Horner, K. N., He, Z., Bancroft, I., Chalhoub, B., Sharpe, A. G. & Parkin, I. A. P., 10 Aug 2020

    Article in Nature Plants

  12. Haloarchaea Swim Slowly for Optimal Chemotactic Efficiency in Low Nutrient Environments

    Thornton, K., Butler, J. K., Davis, S. J., Baxter, B. K. & Wilson, L. G., 5 Aug 2020, (Accepted/In press)

    Article in Nature Communications

  13. Conservation set-asides improve carbon storage and support associated plant diversity in certified sustainable oil palm plantations  

    Fleiss, S., Waddell, E., Ola, B. B., Banin, L. F., Benedick, S., Sailim, A. B., Chapman, D. S., Jelling, A., King, H., McClean, C. J., Yeong, K. L. & Hill, J. K., Aug 2020

    Article in Biological Conservation

  14. Wading through the swamp: what does tropical peatland restoration mean to national level stakeholders in Indonesia?

    Ward, C., Stringer, L. C., Warren-Thomas, E. M., Agus, F., Hamer, K. C., Pettorelli, N., Hariyadi, B., Hodgson, J., Kartika, W. D., Lucey, J. M., McClean, C. J., Hill, J. K., Nurida, N. L. & Saad, A., 30 Jul 2020

    Article in Restoration Ecology

  15. Author Correction: The dental proteome of Homo antecessor (Nature, (2020), 580, 7802, (235-238), 10.1038/s41586-020-2153-8)

    Welker, F., Ramos-Madrigal, J., Gutenbrunner, P., Mackie, M., Tiwary, S., Jersie-Christensen, R. R., Chiva, C., Dickinson, M. R., Kuhlwilm, M., de Manuel, M., Gelabert, P., Martinón-Torres, M., Margvelashvili, A., Arsuaga, J. L., Carbonell, E., Marques-Bonet, T., Penkman, K., Sabidó, E., Cox, J., Olsen, J. V. & 6 others, Lordkipanidze, D., Racimo, F., Lalueza-Fox, C., de Castro, J. M. B., Willerslev, E. & Cappellini, E., 29 Jul 2020

    Comment/debate in Nature

  16. Past, current and potential future distributions of unique genetic diversity in a cold‐adapted mountain butterfly

    Minter, M., Dasmahapatra, K. K., Thomas, C. D., Morecroft, M. D., Tonhasca, A., Schmitt, T., Siozios, S. & Hill, J. K., 29 Jul 2020, (Accepted/In press)

    Article in Ecology and Evolution

  17. Land-use change and propagule pressure promote plant invasions in tropical rainforest remnants

    Waddell, E., Banin, L., Fleiss, S., Hill, J. K., Hughes, M., Jelling, A., Loong, Y. K., Ola, B. B., Sailim, A. B., Tangah, J. & Chapman, D. S., 28 Jul 2020

    Article in Landscape ecology

  18. Caste: Worker Polyethism in the Social Hymenoptera

    Robinson, E. J. H. & Jandt, J., 26 Jul 2020, Encyclopedia of Social Insects. Chris K., S. (ed.). Springer-Verlag

    Research output: Chapter in Book/Report/Conference proceedingEntry for encyclopedia/dictionary

  19. Novel Thienopyrimidine Inhibitors of Leishmania N-Myristoyltransferase with On-Target Activity in Intracellular Amastigotes

    Bell, A. S., Yu, Z., Hutton, J. A., Wright, M. H., Brannigan, J. A., Paape, D., Roberts, S. M., Sutherell, C. L., Ritzefeld, M., Wilkinson, A. J., Smith, D. F., Leatherbarrow, R. J. & Tate, E. W., 23 Jul 2020

    Article in JOURNAL OF MEDICINAL CHEMISTRY

  20. Biogeochemical processes in the active layer and permafrost of a high Arctic fjord valley

    Jones, E. L., Hodson, A. J., Thornton, S. F., Redeker, K. R., Rogers, J., Wynn, P. M., Dixon, T., Bottrell, S. H. & O'Neill, H. B., 21 Jul 2020, (Accepted/In press)

    Article in Frontiers in Earth Science

  21. Can microclimate offer refuge to an upland bird species under climate change?

    Massimino, D., Beale, C. M., Suggitt, A., Crick, H. Q. P., Macgregor, N., Carroll, M. J., Maclean, I. M. D. & Pearce-Higgins, J. W., 18 Jul 2020

    Article in Landscape ecology

  22. Isoprostanoid profiling of marine microalgae

    Vigor, C., Oger, C., Reversat, G., Rocher, A., Zhou, B., Linares-Maurizi, A., Guy, A., Bultel-Ponce, V., Galano, J-M., Vercauteren, J., Durand, T., Potin, P., Tonon, T. & Leblanc, C., 18 Jul 2020

    Article in Biomolecules

  23. Targeting the trypanosome kinetochore with CLK1 protein kinase inhibitors

    Saldivia Concepcion, M. A., Fang, E., Ma, X., Myburgh, E., Brambilla Carnielli Trindade, J., Bower-Lepts, C., Brown, E., Ritchie, R., Lakshminarayana, S. B., Chen, Y-L., Patra, D., Ornelas, E., Koh, H. X. Y., Williams, S., Supek, F., Paape, D., McCulloch, R., Kaiser, M., Barrett, M. P., Jiricek, J. & 3 others, Diagana, T. T., Mottram, J. C. & Rao, S. P. S., 13 Jul 2020

    Article in Nature Microbiology

  24. EGF signaling in bowel carcinoma cells utilizes higher order architectures of EGFR and HER2

    Wollman, A., Llorente-Garcia, I., Fournier, C., Harriman, O. L., Hargreaves, A., Shashkova, S., Ouaret, D., Zhou, P., Liu, T-C., Wilding, J., Kusumi, A., Bodmer, W. & Leake, M. C., 12 Jul 2020, bioRxiv, at Cold Spring Harbor Laboratory.

    Research output: Working paper

  25. Changes in expression level of OsHKT1;5 alters activity of membrane transporters involved in K+ and Ca2+ acquisition and homeostasis in salinized rice roots

    Al Nayef, M., Solis, C., Shabala, L., Ogura, T., Chen, Z., Bose, J., Maathuis, F., Venkataraman, G., Tanoi, K., Yu, M., Zhou, M., Horie, T. & Shabala, S., 10 Jul 2020

    Article in International Journal of Molecular Sciences

  26. Phylogenetic signals and predictability in plant-soil feedbacks

    Wandrag, E. M., Bates, S. E., Barrett, L. G., Catford, J. A., Thrall, P. H., van der Putten, W. H. & Duncan, R. P., 3 Jul 2020

    Article in The New phytologist

  27. A molecular signal integration network underpinning Arabidopsis thaliana seed germination

    Xu, H., Lantzouni, O., Bruggink, T., Benjamins, R., Lanfermeijer, F., Denby, K., Schwechheimer, C. & Bassel, G. W., 2 Jul 2020, (Accepted/In press)

    Article in Current Biology

  28. Communal Innovations: Inspiring Neighborhoods of Hope and Advocacy

    Smith, R. A., Kim, Y., Matthews, S. A., Sternberg, E. D., Doudou, D. T. & Thomas, M. B., 2 Jul 2020

    Article in Journal of health communication

  29. Profiling substrate promiscuity of wild-type sugar kinases for multifluorinated monosaccharides

    Keenan, T., Parmeggiani, F., Malassis, J., Fontenelle, C., Vendeville, J-B., Offen, W. A., Both, P., Huang, K., Marchesi, A., Heyam, A. P., Young, C., Charnock, S. J., Davies, G. J., Linclau, B., Flitsch, S. L. & Fascione, M. A., 2 Jul 2020

    Article in Cell Chemical Biology

  30. Characterization of redox sensitive algal mannitol-1-phosphatases of the haloacid dehalogenase superfamily of proteins

    Le Strat, Y., Tonon, T., Le Blanc, C. & Groisillier, A., 1 Jul 2020, (Accepted/In press)

    Article in bioRxiv

  31. Experimentally assessing the effect of search effort on snare detectability

    Ibbett, H., Milner-Gulland, EJ., Beale, C. M., Dobson, A., Griffin, O., O'Kelly, H. J. & Keane, A., Jul 2020

    Article in Biological Conservation

  32. Siderophore-mediated interactions determine the disease suppressiveness of microbial consortia

    Gu, S., Yang, T., Shao, Z., Cao, K., Jousset, A., Friman, V-P., Mallon, C., Mei, X., Wei, Z., Xu, Y., Shen, Q. & Pommier, T., 30 Jun 2020

    Article in American Society for Microbiology

  33. Global Transcriptomic Responses of Roseithermus sacchariphilus Strain RA in Media Supplemented with Beechwood Xylan

    Liew, K. J., Bruce, N. C., Sani, R. K., Chong, C. S., Yaakop, A. S., Shamsir, M. S. & Goh, K. M., 29 Jun 2020

    Article in Microorganisms

  34. Joint Selenium-Iodine Supply and Arbuscular Mycorrhizal Fungi Inoculation Affect Yield and Quality of Chickpea Seeds and Residual Biomass

    Golubkina, N., Gomez, L. D., Kekina, H., Cozzolino, E., Simister, R., Tallarita, A., Torino, V., Koshevarov, A., Cuciniello, A., Maiello, R., Cenvinzo, V. & Caruso, G., 27 Jun 2020

    Article in Plants

  35. The molecular basis of thioalcohol production in human body odour

    Rudden, M. M., Herman, R., Rose, M., Bawdon, D., Cox, D. S., Dodson, E., Holden, M. T. G., Wilkinson, A. J., James, A. G. & Thomas, G. H., 26 Jun 2020, (Accepted/In press)

    Article in Scientific Reports

  36. An Arduino based Automatic Pressure Evaluation System (A-APES) to quantify growth of non-model anaerobes in culture

    Wilken, S. E., Leggieri, P. A., Kerdman-Andrade, C., Reilly, M., Theodorou, M. K. & O'Malley, M. A., 24 Jun 2020

    Article in AIChE Journal

  37. Human GBP1 binds LPS to initiate assembly of a caspase-4 activating platform on cytosolic bacteria

    Santos, J. C., Boucher, D., Schneider, L. K., Demarco, B., Dilucca, M., Shkarina, K., Heilig, R., Chen, K. W., Lim, R. Y. H. & Broz, P., 24 Jun 2020

    Article in Nature Communications

  38. Multicentre Randomised Double-Blind Placebo Controlled Trial of Cytisine for Smoking Cessation in Smokers with Tuberculosis

    Dogar, O. F., Keding, A., Gabe, R., Marshall, A., Huque, R., Barua, D., Fatima, R., Khan, A., Zahid, R., Mansoor, S., Kotz, D., Boeckmann, M., Elsey, H., Kralikova, E., Parrott, S., Li, J., Readshaw, A. E., Sheikh, A. & Siddiqi, K., 24 Jun 2020, (Accepted/In press)

    Article in The Lancet Global Health

  39. Cost, risk and avoidance of inbreeding in a cooperatively breeding bird

    Leedale, A., Simeoni, M., Sharp, S. P., Green, J. P., Slate, J., Lachlan, R., Robinson, E. J. H. & Hatchwell, B., 22 Jun 2020

    Article in Proceedings of the National Academy of Sciences USA

  40. Calculating effect sizes in animal social network analysis

    Franks, D. W., Weiss, M. N., Silk, M. J., Perryman, R. J. Y. & Croft, D. P., 21 Jun 2020

    Article in Methods in ecology and evolution

  41. A Brassica napus reductase gene dissected by associative transcriptomics enhances plant adaption to freezing stress

    Huang, Y., Hussain, M. A., Luo, D., Xu, H., Zeng, C., Havlickova, L., Bancroft, I., Tian, Z., Zhang, X., Cheng, Y., Zou, X., Lu, G. & Lv, Y., 15 Jun 2020, (Accepted/In press)

    Article in Frontiers in Plant Science

  42. Essential roles for deubiquitination in Leishmania life cycle progression

    Damianou, A., Burge, R., Catta-Preta, C. M. C., Geoghegan, V. L., Nievas, R., Newling, K., Brown, E., Burchmore, R. J., Rodenko, B. & Mottram, J. C., 9 Jun 2020, (Accepted/In press)

    Article in PLOS PATHOGENS

  43. Novel markers for high-throughput protoplast-based analyses of phytohormone signaling

    Lehmann, S., Dominguez-Ferreras, A., Huang, W-J., Denby, K., Ntoukakis, V. & Schäfer, P., 4 Jun 2020

    Article in PLOS one

  44. Differential effects of day/night cues and the circadian clock on the barley transcriptome

    Müller, L. M., Mombaerts, L., Pankin, A., Davis, S. J., Webb, A. A. R., Goncalves, J. & von Korff, M., 1 Jun 2020

    Article in Plant Physiology

  45. Diversity of endogenous Avian Leukosis Virus subgroup E (ALVE) insertions in indigenous chickens

    Mason, A. S., Miedzinska, K., Kebede, A., Bamidele, O., Al-Jumaili, A. S., Dessie, T., Hanotte, O. & Smith, J., 1 Jun 2020

    Article in Genetics Selection Evolution

  46. Caspase-1 cleaves Bid to release mitochondrial SMAC and drive secondary necrosis in the absence of GSDMD

    Heilig, R., Dilucca, M., Boucher, D., Chen, K. W., Hancz, D., Demarco, B., Shkarina, K. & Broz, P., Jun 2020

    Article in Life science alliance

  47. Agri-environment conservation set-asides have co-benefits for connectivity

    Threadgill, K., McClean, C. J., Hodgson, J. A., Jones, N. & Hill, J. K., 28 May 2020, (Accepted/In press)

    Article in Ecography

  48. Group-2 innate lymphoid cell-dependent regulation of tissue neutrophil migration by alternatively activated macrophage-secreted Ear11

    Panova, V., Gogoi, M., Rodriguez-Rodriguez, N., Sivasubramaniam, M., Jolin, H. E., Heycock, M. W. D., Walker, J. A., Rana, B. M. J., Drynan, L. F., Hodskinson, M., Pannell, R., King, G., Wing, M., Easton, A. J., Oedekoven, C. A., Kent, D. G., Fallon, P. G., Barlow, J. L. & McKenzie, A. N. J., 26 May 2020

    Article in Mucosal Immunology

  49. Soil fungal networks maintain local dominance of ectomycorrhizal trees

    Liang, M., Johnson, D., Burslem, D. F. R. P., Yu, S., Fang, M., Taylor, J. D., Taylor, A. F. S., Helgason, T. & Liu, X., 26 May 2020

    Article in Nature Communications

  50. Cell wall remodeling under salt stress: Insights into changes in polysaccharides, feruloylation, lignification, and phenolic metabolism in maize

    Oliveira, D. M., Mota, T. R., Salatta, F. V., Sinzker, R. C., Končitíková, R., Kopečný, D., Simister, R., Silva, M., Goeminne, G., Morreel, K., Rencoret, J., Gutiérrez, A., Tryfona, T., Marchiosi, R., Dupree, P., Del Río, J. C., Boerjan, W., McQueen-Mason, S. J., Gomez, L. D., Ferrarese-Filho, O. & 1 others, Dos Santos, W. D., 22 May 2020

    Article in Plant, Cell and Environment

  51. Making messy data work for conservation

    Dobson, ADM., Milner-Gulland, EJ., Aebischer, N. J., Beale, C. M., Brozovic, R., Coals, P., Critchlow, R., Dancer, A., Greve, M., Hinsley, A., Ibbett, H., Johnston, A., Kuiper, T., Le Comber, S., Mahood, S. P., Moore, J. F., Nilsen, E. B., Pocock, M. J. O., Quinn, A., Travers, H. & 3 others, Wilfred, P., Wright, J. & Keane, A., 22 May 2020

    Article in One Earth

  52. The effect of microbial inoculant origin on the rhizosphere bacterial community composition and plant growth-promotion

    Gu, Y., Dong, K., Geisen, S., Yang, W., Yan, Y., Gu, D., Liu, N., Borisjuk, N., Luo, Y. & Friman, V-P., 21 May 2020

    Article in Plant and soil

  53. AI for social good: unlocking the opportunity for positive impact

    Tomašev, N., Cornebise, J., Hutter, F., Mohamed, S., Picciariello, A., Ezer, D., Connelly, B., Belgrave, D. C. M., van der Haert, F. C., Mugisha, F., Abila, G., Arai, G., Arai, H., Almiraat, H., Proskurnia, J., Snyder, K., Otake-Matsuura, M., Othman, M., Glasmachers, T., de Wever, W. & 5 others, Teh, Y. W., Khan, M. E., De Winne, R., Schaul, T. & Clopath, C., 18 May 2020

    Article in Nature Communications

  54. Characterization of flowing liquid films as a regenerating plasma mirror for high repetition-rate laser contrast enhancement

    Underwood, C. I. D., Gan, G., He, Z. H., Murphy, C. D., Thomas, A. G. R., Krushelnick, K. & Nees, J., 18 May 2020

    Article in Laser and Particle Beams

  55. The evolutionary origins of the cat attractant nepetalactone in catnip

    Lichman, B. R., Godden, G., Hamilton, J., Palmer, L., Kamileen, M. O., Zhao, D., Vaillancourt, B., Wood, J. C., Sun, M., Kinser, T. J., Henry, L. K., Rodriguez-Lopez, C., Dudareva, N., Soltis, D. E., Soltis, P., Buell, C. R. & O'Connor, S. E., 13 May 2020

    Article in Science Advances

  56. Competition for iron drives phytopathogen control by natural rhizosphere microbiomes

    Gu, S., Wei, Z., Shao, Z., Friman, V-P., Cao, K., Yang, T., Kramer, J., Wang, X., Li, M., Mei, X., Xu, Y., Shen, Q., Kummerli, R. & Jousset, A., 11 May 2020

    Article in Nature Microbiology

  57. Single-cell analyses reveal aberrant pathways for megakaryocyte-biased hematopoiesis in myelofibrosis and identify mutant clone-specific targets

    Psaila, B., Wang, G., Rodriguez Meira, A., Li, R., Heuston, E. F., Murphy, L., Yee, D., Hitchcock, I. S., Sousos, N., O'Sullivan, J., Anderson, S., Senis, Y. A., Weinberg, O. K., Calicchio, M. L., Iskander, D., Royston, D., Milojkovic, D., Roberts, I., Bodine, D. M., Thongjuea, S. & 1 others, Mead, A. J., 7 May 2020

    Article in Molecular Cell

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