Search research publications and outputs

  1. 2019
  2. Phage combination therapies for bacterial wilt disease in tomato

    Wang, X., Wei, Z., Yang, K., Wang, J., Jousset, A., Xu, Y., Shen, Q. & Friman, V-P., 2 Dec 2019

    Article in Nature Biotechnology

  3. A cycle of ubiquitination regulates adaptor function of the Nedd4-family ubiquitin ligase Rsp5

    MacDonald, C., Shields, S. B., Williams, C. A., Winistorfer, S. & Piper, R. C., 29 Nov 2019, (Accepted/In press)

    Article in Current Biology

  4. Post-reproductive Killer Whale Grandmothers Improve the Survival of their Grandoffspring

    Nattrass, S., Croft, D. P., Ellis, S., Cant, M. A., Weiss, M. N., Wright, B., Stredulinsky, E., Doniol-Valcroze, T., Ford, J. K. B., Balcomb, K. C. & Franks, D. W., 5 Nov 2019, (Accepted/In press)

    Article in Proceedings of the National Academy of Sciences of the United States of America

  5. Photoperiod sensing of the circadian clock is controlled by EARLY FLOWERING 3 and GIGANTEA

    Anwer, M. U., Davis, A. M., Davis, S. J. & Quint, M., 4 Nov 2019, (Accepted/In press)

    Article in The Plant journal

  6. The ATR kinase of Trypanosoma brucei links DNA damage signalling during antigenic 1 variation with regulation of RNA Polymerase I transcribed surface antigens

    Black, J. A., Crouch, K., Lemgruber, L., Lapsley, C., Dickens, N. J., Tosi, L. R. O., Mottram, J. C. & McCulloch, R., 31 Oct 2019, (Accepted/In press)

    Article in Cell reports

  7. Land Rights in Sustainability: Rights and Responsibilities

    Zahringer, J. G., Beale, C. M., Meyer, C., Li, T., Ceddia, M. G., Veit, P., Knoke, T., Grafton, Q., Meinzen-Dick, R., Nkonya, E., Robinson, B. & Holland, M. B., 25 Oct 2019

    Comment/debate in Voices

  8. The fitness challenge of studying molecular adaptation

    Coombes, D., Moir, J., Poole, A. M., Cooper, T. F. & Dobson, R. C. J., 23 Oct 2019

    Article in Biochemical Society transactions

  9. Elucidation of a sialic acid metabolism pathway in mucus-foraging Ruminococcus gnavus unravels mechanisms of bacterial adaptation to the gut

    Bell, A., Brunt, J., Crost, E., Vaux, L., Nepravishta, R., Owen, C. D., Latousakis, D., Xiao, A., Li, W., Chen, X., Walsh, M. A., Claesen, J., Angulo, J., Thomas, G. H. & Juge, N., 21 Oct 2019

    Article in Nature Microbiology

  10. Assessing the effectiveness of protected areas for conserving range-restricted rainforest butterflies in Sabah, Borneo

    Scriven, S. A-L., Williams, S. H., Ghani, M. A., Agama, A. L., Benedick, S., Brodie, J. F., Hamer, K. C., McClean, C. J., Reynolds, G. & Hill, J. K., 18 Oct 2019

    Article in Biotropica

  11. Anaerobic digestion of Crassulacean Acid Metabolism plants: Exploring alternative feedstocks for semi-arid lands

    Lueangwattanapong, K., Ammam, F., Mason, P. M., Whitehead, C., McQueen-Mason, S. J., Gomez, L. D., Smith, J. A. C. & Thompson, I. P., 14 Oct 2019

    Article in BIORESOURCE TECHNOLOGY

  12. Chemically-induced Neurite-like Outgrowth Reveals Multicellular Network Function in Patient-derived Glioblastoma Cells

    da Silva, B., Irving, B. K., Polson, E. S., Droop, A., Griffiths, H. B. S., Mathew, R. K., Stead, L. F., Marrison, J., Williams, C., Williams, J., Short, S. C., Scarcia, M., O'Toole, P. J., Allison, S. J., Mavria, G. & Wurdak, H., 10 Oct 2019

    Article in Journal of Cell Science

  13. Interventions for drug-using offenders with co-occurring mental health problems

    Perry, A. E., Martyn-St James, M., Burns, L., Hewitt, C., Glanville, J. M., Aboaja, A., Thakkar, P., Santosh Kumar, K. M., Pearson, C., Wright, K. & Swami, S., 7 Oct 2019

    Review article in Cochrane Database of Systematic Reviews

  14. Wildfire alters the structure and seasonal dynamics of nocturnal pollen‐transport networks

    Banza, P., MacGregor, C. J., Belo, A. DF., Fox, R., Pocock, M. JO. & Evans, D. M., 7 Oct 2019

    Article in Functional Ecology

  15. Early Pleistocene enamel proteome from Dmanisi resolves Stephanorhinus phylogeny

    Cappellini, E., Welker, F., Pandolfi, L., Ramos-Madrigal, J., Samodova, D., Rüther, P. L., Fotakis, A. K., Lyon, D., Moreno-Mayar, J. V., Bukhsianidze, M., Rakownikow Jersie-Christensen, R., Mackie, M., Ginolhac, A., Ferring, R., Tappen, M., Palkopoulou, E., Dickinson, M. R., Stafford, T. W., Chan, Y. L., Götherström, A. & 23 others, Nathan, S. K. S. S., Heintzman, P. D., Kapp, J. D., Kirillova, I., Moodley, Y., Agusti, J., Kahlke, R. D., Kiladze, G., Martínez-Navarro, B., Liu, S., Sandoval Velasco, M., Sinding, M. H. S., Kelstrup, C. D., Allentoft, M. E., Orlando, L., Penkman, K., Shapiro, B., Rook, L., Dalén, L., Gilbert, M. T. P., Olsen, J. V., Lordkipanidze, D. & Willerslev, E., 1 Oct 2019

    Article in Nature

  16. Insights into microbial community structure and diversity in oil palm waste compost

    Khalid, N. A., Rajandas, H., Parimannan, S., Croft, L. J., Loke, S., Chong, C. S., Bruce, N. C. & Yahya, A., 1 Oct 2019

    Article in 3 Biotech

  17. The variable toxicity of silver ions in cell culture media

    Souter, P. M., Cunningham, J. C., Horner, A. & Genever, P. G., 1 Oct 2019

    Article in Toxicology in vitro

  18. Environmental DNA (eDNA) metabarcoding of pond water as a tool to survey conservation and management priority mammals

    Harper, L., Lawson Handley, L., Carpenter, A., Ghazali, M., Di Muri, C., MacGregor, C. J., Logan, T., Law, A., Breithaupt, T., Read, D., McDevitt, A. & Haenfling, B., Oct 2019

    Article in Biological Conservation

  19. Living in groups: spatial-moment dynamics with neighbour-biased movements

    Binny, R. N., Law, R. & Plank, M., 21 Sep 2019, (Accepted/In press)

    Article in Ecological Modelling

  20. Identification of a novel orally bioavailable ERK5 inhibitor with selectivity over p38α and BRD4

    Tucker, J. A., Myers, S. M., Miller, D. C., Molyneux, L., Arasta, M., Bawn, R. H., Blackburn, T. J., Cook, S. J., Edwards, N., Endicott, J. A., Golding, B. T., Griffin, R. J., Hammonds, T., Hardcastle, I. R., Harnor, S. J., Heptinstall, A. B., Lochhead, P. A., Martin, M. P., Martin, N. C., Newell, D. R. & 10 others, Owen, P. J., Pang, L. C., Reuillon, T., Rigoreau, L. J. M., Thomas, H. D., Wang, L-Z., Wong, A-C., Noble, M. E. M., Wedge, S. R. & Cano, C., 15 Sep 2019

    Article in European Journal of Medicinal Chemistry

  21. Ancestral Admixture Is the Main Determinant of Global Biodiversity in Fission Yeast

    Tusso, S., Nieuwenhuis, B. P. S., Sedlazeck, F. J., Davey, J. W., Jeffares, D. C. & Wolf, J. B. W., 9 Sep 2019

    Article in Molecular Biology and Evolution

  22. A methodological framework to embrace soil biodiversity

    Geisen, S., Briones, M. J. I., Gan, H., Behan-Pelletier, V. M., Friman, V-P., de Groot, G. A., Hannula, E., Lindo, Z., Philippot, L., Tiunov, A. V. & Wall, D. H., 1 Sep 2019

    Article in Soil Biology and Biochemistry

  23. Geographic contrasts between pre- and postzygotic barriers are consistent with reinforcement in Heliconius butterflies.

    Rosser, N. S., Queste, L. M., Cama, B., Edelman, N., Mann, F., Mori Pezo, R., Morris, J., Segami, C., Velado, P., Schulz, S., Mallet, J. L. B. & Dasmahapatra, K. K., 1 Sep 2019

    Article in Evolution: international journal of organic evolution

  24. Social preferences and network structure in a population of reef manta rays

    Perryman, R. J. Y., Venables, S. K., Tapilatu, R. F., Marshall, A. D., Brown, C. & Franks, D. W., 22 Aug 2019

    Article in Behavioral Ecology and Sociobiology

  25. Sodium homeostasis in the tumour microenvironment

    Leslie, T. K., James, A. D., Zaccagna, F., Grist, J. T., Deen, S., Kennerley, A. J., Riemer, F., Kaggie, J. D., Gallagher, F. A., Gilbert, F. J. & Brackenbury, W. J., 23 Jul 2019

    Article in BBA - Reviews on Cancer

  26. Thinking (in) complexity: (In) definitions and (mis)conceptions

    Teixeira de Melo, A., Caves, L. S. D., Dewitt, A., Clutton, E., Macpherson, R. & Garnett, P., 22 Jul 2019

    Article in Systems Research and Behavioral Science

  27. Misdiagnosis and uncritical use of plant mycorrhizal data are not the only elephants in the room

    Bueno, C. G., Aldrich-Wolfe, L., Chaudhary, V. B., Gerz, M., Helgason, T., Hoeksema, J. D., Kilronomos, J., Lekberg, Y., Leon, D., Maherali, H., Opik, M., Zobel, M. & Moora, M., 27 Jun 2019

    Letter in New Phytologist

  28. Integrated processing of sugarcane bagasse: Arabinoxylan extraction integrated with ethanol production

    Campbell, G. M., Čukelj Mustač, N., Alyassin, M., Gomez, L. D., Simister, R., Flint, J., Philips, D. J., Gronnow, M. J. & Westwood, N. J., 15 Jun 2019

    Article in Biochemical Engineering Journal

  29. Cell wall hydrolases act in concert during aerenchyma development in sugarcane roots

    Grandis, A., Leite, D. C. C., Tavares, E. Q. P., Arenque-Musa, B. C., Gaiarsa, J. W., Martins, M. C. M., De Souza, A. P., Gomez, L. D., Fabbri, C., Mattei, B. & Buckeridge, M. S., 13 Jun 2019

    Article in Annals of Botany

  30. Latitudinal constraints in responsiveness of plants to arbuscular mycorrhiza: the ‘sun-worshipper’ hypothesis

    Veresoglou, S., Chen, B., Fischer, M., Helgason, T., Mamolos, A., Rillig, M., Roldan, A. & Johnson, D., 5 Jun 2019

    Letter in New Phytologist

  31. Cytonuclear interactions remain stable during allopolyploid evolution despite repeated whole-genome duplications in Brassica

    Ferreira de Carvalho, J., Lucas, J., Deniot, G., Falentin, C., Filangi, O., Gilet, M., Legeal, F., Lode, M., Morice, J., Trotoux, G., Aury, J-M., Barbe, V., Keller, J., Snowdon, R., He, Z., Denoeud, F., Wincker, P., Bancroft, I., Chevre, A-M. & Rosseau-Gueutin, M., 1 May 2019

    Article in The Plant journal

  32. Simulated herbivory: the key to disentangling plant defence responses

    Waterman, J. M., Cazzonelli, C. I., Hartley, S. E. & Johnson, S. N., 1 May 2019

    Article in Trends in Ecology & Evolution

  33. Bootstrapping the Battle of Britain

    Fagan, B. T., Horwood, I., MacKay, N. J., Price, C., Richards, E. & Wood, A. J., 22 Apr 2019, (Accepted/In press)

    Article in The Journal of Military History

  34. Hypoxic changes to the urothelium as a bystander of end-stage bladder disease

    Radford, A. R., Hinley, J. S., Pilborough, A., Southgate, J. & Subramaniam, R., 15 Apr 2019

    Article in Journal of Pediatric Urology

  35. The role of hedgerows in soil functioning within agricultural landscapes

    Holden, J., Grayson, R., Berdeni, D., Bird, S., Chapman, P., Edmonson, J., Firbank, L., Helgason, T., Hodson, M. E., Hunt, S., Jones, D., Lappage, M., Marshall-Harries, E., Nelson, M., Prendergast-Miller, M. T., Shaw, H., Wade, R. & Leake, J., Mar 2019

    Article in Agriculture, Ecosystems & Environment

  36. 2018
  37. TLR2 signaling in skin non-hematopoietic cells induces early neutrophil recruitment in response to Leishmania major infection

    Ronet, C., Passelli, K., Charmoy, M., Scarpellino, L., Myburgh, E., Hauyon La Torre, Y., Turco, S., Mottram, J. C., Fasel, N., Luther, S. A., Beverley, S. M., Launois, P. & Tacchini-Cottier, F., 27 Dec 2018

    Article in Journal of investigative dermatology

  38. Drug Discovery for Kinetoplastid Diseases: Future Directions

    Rao, S. P. S., Barrett, M., Dranoff, G., Faraday, C., Gimpelewicz, C. R., Hailu, A., Jones, C. L., Kelly, J. M., Lazdins-Helds, J. K., Maeser, P., Mengel, J., Mottram, J. C., Mowbray, C. E., Sacks, D. L., Scott, P., Spath, G. F., Tarleton, R. L., Spector, J. M. & Diagana, T. T., 13 Dec 2018

    Article in ACS Infectious Diseases

  39. A track of the clones: new developments in cellular barcoding.

    Lyne, A-M., Kent, DG., Laurenti, E., Cornils, K., Glauche, I. & Perié, L., 1 Dec 2018

    Article in Experimental hematology

  40. HSP90 contributes to entrainment of the Arabidopsis circadian clock via the morning loop

    Davis, A. M., Ronald, J. A., Ma, Z., Wilkinson, A. J., Philippou, K., Shindo, T., Queitsch, C. & Davis, S. J., 1 Dec 2018

    Article in Genetics

  41. Niche Heterogeneity Impacts Evolution of Myeloproliferative Neoplasms Driven By the Same Oncogenic Pathway

    Korn, C., Rak, J., Garcia-Garcia, A., Fielding, C., Khorshed, R., Gonzalez-Anton, S., Li, J., Norfo, R., Baxter, EJ., McKerrell, T., Roberts, T., Eldaly, H., Godfrey, AL., Castillo-Venzor, A., Kusumbe, A., Mead, AJ., Green, AR., Kent, D., Lo Celso, C. & Mendez-Ferrer, S., 29 Nov 2018

    Article in Blood

  42. Population dynamics of normal human blood inferred from somatic mutations.

    Lee-Six, H., Øbro, NF., Shepherd, MS., Grossmann, S., Dawson, K., Belmonte, M., Osborne, RJ., Huntly, BJP., Martincorena, I., Anderson, E., O'Neill, L., Stratton, MR., Laurenti, E., Green, AR., Kent, DG. & Campbell, PJ., 27 Sep 2018

    Article in Nature

  43. Single-cell approaches identify the molecular network driving malignant hematopoietic stem cell self-renewal.

    Shepherd, MS., Li, J., Wilson, NK., Oedekoven, CA., Li, J., Belmonte, M., Fink, J., Prick, JCM., Pask, DC., Hamilton, TL., Loeffler, D., Rao, A., Schröder, T., Göttgens, B., Green, AR. & Kent, DG., 23 Aug 2018

    Article in Blood

  44. KHS101 disrupts energy metabolism in human glioblastoma cells and reduces tumor growth in mice.

    Polson, ES., Kuchler, VB., Abbosh, C., Ross, EM., Mathew, RK., Beard, HA., da Silva, B., Holding, AN., Ballereau, S., Chuntharpursat-Bon, E., Williams, J., Griffiths, HBS., Shao, H., Patel, A., Davies, AJ., Droop, A., Chumas, P., Short, SC., Lorger, M., Gestwicki, JE. & 6 others, Roberts, LD., Bon, RS., Allison, SJ., Zhu, S., Markowetz, F. & Wurdak, H., 15 Aug 2018

    Article in Science Translational Medicine

  45. Identification of residues in ABCG2 affecting protein trafficking and drug transport, using co-evolutionary analysis of ABCG sequences

    Haider, A. J., Cox, M. H., Jones, N., Goode, A. J., Bridge, K. S., Wong, K., Briggs, D. & Kerr, I. D., 1 Aug 2018

    Article in Bioscience Reports

  46. A single-cell hematopoietic landscape resolves 8 lineage trajectories and defects in Kit mutant mice.

    Dahlin, JS., Hamey, FK., Pijuan-Sala, B., Shepherd, M. S., Lau, WWY., Nestorowa, S., Weinreb, C., Wolock, S., Hannah, R., Diamanti, E., Kent, DG., Göttgens, B. & Wilson, NK., 24 May 2018

    Article in Blood

  47. One hundred priority questions for landscape restoration in Europe

    Ockendon, N., Thomas, D. H. L., Cortina, J., Adams, W. M., Aykroyd, T., Barov, B., Boitani, L., Bonn, A., Branquinho, C., Brombacher, M., Burrell, C., Carver, S., Crick, H. Q. P., Duguy, B., Everett, S., Fokkens, B., Fuller, R. J., Gibbons, D. W., Gokhelashvili, R., Griffin, C. & 18 others, Halley, D. J., Hotham, P., Hughes, F. M. R., Karamanlidis, A. A., McOwen, C. J., Miles, L., Mitchell, R., Rands, M. R. W., Roberts, J., Sandom, C. J., Spencer, J. W., ten Broeke, E., Tew, E. R., Thomas, C. D., Timoshyna, A., Unsworth, R. K. F., Warrington, S. & Sutherland, W. J., 1 May 2018

    Review article in Biological Conservation

  48. Mutant calreticulin knockin mice develop thrombocytosis and myelofibrosis without a stem cell self-renewal advantage.

    Li, J., Prins, D., Park, HJ., Grinfeld, J., Gonzalez-Arias, C., Loughran, S., Dovey, OM., Klampfl, T., Bennett, C., Hamilton, TL., Pask, DC., Sneade, R., Williams, M., Aungier, J., Ghevaert, C., Vassiliou, GS., Kent, DG. & Green, AR., 8 Feb 2018

    Article in Blood

  49. Erratum: Predicting educational achievement from DNA (Molecular psychiatry (2017) 22 2 (267-272))

    Selzam, S., Krapohl, E., von Stumm, S., O'Reilly, P. F., Rimfeld, K., Kovas, Y., Dale, P. S., Lee, J. J. & Plomin, R., 1 Jan 2018

    Comment/debate in Molecular psychiatry

  50. 2017
  51. Correction to: Quantifying and understanding carbon storage and sequestration within the Eastern Arc Mountains of Tanzania, a tropical biodiversity hotspot

    Willcock, S., Phillips, O. L., Platts, P. J., Balmford, A., Burgess, N. D., Lovett, J. C., Ahrends, A., Bayliss, J., Doggart, N., Doody, K., Fanning, E., Green, J. M. H., Hall, J., Howell, K. L., Marchant, R., Marshall, A. R., Mbilinyi, B., Munishi, P. K. T., Owen, N., Swetnam, R. D. & 2 others, Topp-Jorgensen, E. J. & Lewis, S. L., 7 Dec 2017

    Article in Carbon Balance and Management

  52. The G-box transcriptional regulatory code in Arabidopsis

    Ezer, D., Shepherd, S. JK., Brestovitsky, A., Dickinson, P., Cortijo, S., Charoensawan, V., Box, M. S., Biswas, S., Jaeger, K. E. & Wigge, P. A., 1 Oct 2017

    Article in Plant Physiology

  53. The evening complex coordinates environmental and endogenous signals in Arabidopsis

    Ezer, D., Jung, J-H., Lan, H., Biswas, S., Gregoire, L., Box, M. S., Charoensawan, V., Cortijo, S., Lai, X., Stöckle, D., Zubieta, C., Jaeger, K. E. & Wigge, P. A., 26 Jun 2017

    Article in Nature Plants

  54. Mutations in the vesicular trafficking protein Annexin A11 are associated with amyotrophic lateral sclerosis Bradley N. Smith

    Smith, B. N., Topp, S. D., Fallini, C., Shibata, H., Chen, H-J., Troakes, C., King, A., Ticozzi, N., Kenna, K. P., Soragia-Gkazi, A., Miller, J. W., Sato, A., Dias, D. M., Jeon, M., Vance, C., Wong, C. H., de Majo, M., Kattuah, W., Mitchell, J. C., Scotter, E. L. & 36 others, Parkin, N. W., Sapp, P. C., Nolan, M., Nestor, P. J., Simpson, M., Weale, M., Lek, M., Baas, F., Vianney de Jong, J. M., Ten Asbroek, A. L. M. A., Redondo, A. G., Esteban-Pérez, J., Tiloca, C., Verde, F., Duga, S., Leigh, N., Pall, H., Morrison, K. E., Al-Chalabi, A., Shaw, P. J., Kirby, J., Turner, M. R., Talbot, K., Hardiman, O., Glass, J. D., De Belleroche, J., Maki, M., Moss, S. E., Miller, C., Gellera, C., Ratti, A., Al-Sarraj, S., Brown, R. H., Silani, V., Landers, J. E. & Shaw, C. E., 3 May 2017

    Article in Science Translational Medicine

  55. Hemopoietic-specific Sf3b1-K700E knock-in mice display the splicing defect seen in human MDS but develop anemia without ring sideroblasts.

    Mupo, A., Seiler, M., Sathiaseelan, V., Pance, A., Yang, Y., Agrawal, AA., Iorio, F., Bautista, R., Pacharne, S., Tzelepis, K., Manes, N., Wright, P., Papaemmanuil, E., Kent, D. G., Campbell, P. C., Buonamici, S., Bolli, N. & Vassiliou, G. S., 1 Mar 2017

    Article in Leukemia

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