Search research publications and outputs

  1. Article › Research › Not peer-reviewed
  2. Article › Research › Peer-reviewed
  3. 'Palaeoshellomics' reveals the use of freshwater mother-of-pearl in prehistory

    Sakalauskaite, J., Andersen, S. H., Biagi, P., Borrello, M. A., Cocquerez, T., Colonese, A. C., Dal Bello, F., Girod, A., Heumüller, M., Koon, H., Mandili, G., Medana, C., Penkman, K. E., Plasseraud, L., Schlichtherle, H., Taylor, S., Tokarski, C., Thomas, J., Wilson, J., Marin, F. & 1 others, Demarchi, B., 7 May 2019

    Article in eLife

  4. A Brassica napus Reductase Gene Dissected by Associative Transcriptomics Enhances Plant Adaption to Freezing Stress

    Huang, Y., Hussain, M. A., Luo, D., Xu, H., Zeng, C., Havlickova, L., Bancroft, I., Tian, Z., Zhang, X., Cheng, Y., Zou, X., Lu, G. & Lv, Y., 26 Jun 2020

    Article in Frontiers in Plant Science

  5. A DiCre recombinase-based system for inducible expression in Leishmania major

    Santos, R. E. R. S., Silva, G. L. A., Santos, E. V., Duncan, S. M., Mottram, J. C., Damasceno, J. D. & Tosi, L. R. O., 1 Sep 2017

    Article in MOLECULAR AND BIOCHEMICAL PARASITOLOGY

  6. A HIF-LIMD1 negative feedback mechanism drives the adaptive response to hypoxia and mitigates pro-tumorigenic hypoxic effects

    Bridge, K., Foxler, D. E., Foster, J. G., Grevitt, P., Curry, S., Shah, K. M., Davidson, K. M., Nagano, A., Gadaleta, E., Rhys, H. I., Kennedy, P. T., Hermida, M. A., Chang, T-Y., Shaw, P. E., Reynolds, L. E., McKay, T. R., Wang, H-W., Ribeiro, P. S., Plevin, M. J., Lagos, D. & 7 others, Lemoine, N. R., Rajan, P., Graham, T. A., Chelala, C., Hodivala-Dilke, K. M., Spendlove, I. & Sharp, T. V., 1 Jul 2018

    Article in EMBO Molecular Medicine

  7. A Leishmania infantum genetic marker associated with miltefosine treatment failure for visceral leishmaniasis

    Mottram, J. C., Jeffares, D., Brambilla Carnielli Trindade, J., Crouch, K., Forrester, S. J., Costa Silva, V., Carvalho, S. F. G., Damasceno, J. D., Brown, E., Dickens, N. J., Costa, D. L., Costa, C. H. N. & Dietze, R., 27 Sep 2018

    Article in EBioMedicine

  8. A Modest Addendum to the English Sediment Core Meta-Database

    Woodhouse, E. L., Ratcliffe, J. L., Andersen, R., Suggitt, A., Maclean, I. & Payne, R. J., 20 Feb 2017

    Article in Open Quaternary

  9. A New Chicken Genome Assembly Provides Insight into Avian Genome Structure

    Warren, W. C., Hillier, L. W., Tomlinson, C., Minx, P., Kremitzki, M., Graves, T., Markovic, C., Bouk, N., Pruitt, K. D., Thibaud-Nissen, F., Schneider, V., Mansour, T. A., Brown, C. T., Zimin, A., Hawken, R., Abrahamsen, M., Pyrkosz, A. B., Morisson, M., Fillon, V., Vignal, A. & 12 others, Chow, W., Howe, K., Fulton, J. E., Miller, M. M., Lovell, P., Mello, C. V., Wirthlin, M., Mason, A. S., Kuo, R., Burt, D. W., Dodgson, J. B. & Cheng, H. H., 5 Jan 2017

    Article in G3: Genes, Genomes, Genetics

  10. A Plant-Feeding Nematode Indirectly Increases the Fitness of an Aphid

    Hoysted, G. A., Lilley, C. J., Field, K. J., Dickinson, M., Hartley, S. E. & Unwin, P. E., 3 Nov 2017

    Article in Frontiers in Plant Science

  11. A Salmochelin S4-inspired Ciprofloxacin Trojan Horse Conjugate

    Sanderson, T., Black, C., Southwell, J., Wilde, E., Pandey, A., Herman, R., Thomas, G. H., Boros, E., Duhme-Klair, A. K. & Routledge, A., 11 Sep 2020

    Article in ACS Infectious Diseases

  12. A Simple Threshold Rule Is Sufficient to Explain Sophisticated Collective Decision-Making

    Robinson, E. J. H., Franks, N. R., Ellis, S., Okuda, S. & Marshall, J. A. R., 24 May 2011

    Article in PLoS ONE

  13. A Spotlight on Rad52 in Cyanidiophytina (Rhodophyta): A Relic in Algal Heritage

    Del Mondo, A., Iovinella, M., Petriccione, M., Nunziata, A., Davis, S. J., Cioppa, D. & Ciniglia, C., 19 Feb 2019

    Article in Plants

  14. A comparison of satellite remote sensing data fusion methods to map peat swamp forest loss in Sumatra, Indonesia

    Crowson, M., Warren-Thomas, E. M., Hill, J. K., Hariyadi, B., Agus, F., Saad, A., Hamer, K. C., Hodgson, J. A., Kartika, W. D., Lucey, J. M., McClean, C. J., Nurida, N. L., Pratiwi, E., Stringer, L. C., Ward, C. F. M. & Pettorelli, N., 10 Dec 2018

    Article in Remote Sensing in Ecology and Conservation

  15. A curated list of genes that affect the plant ionome

    Whitt, L., Ricachenevsky, F. K., Ziegler, G., Clemens, S., Walker, E., Maathuis, F., Kear, P. & Baxter, I., 28 Aug 2020, (Accepted/In press)

    Article in Plant Direct

  16. A cycle of ubiquitination regulates adaptor function of the Nedd4-family ubiquitin ligase Rsp5

    MacDonald, C., Shields, S. B., Williams, C. A., Winistorfer, S. & Piper, R. C., 3 Feb 2020

    Article in Current Biology

  17. A defined mechanistic correlate of protection against Plasmodium falciparum malaria in non-human primates.

    Douglas, A. D., Baldeviano, G. C., Jin, J., Miura, K., Diouf, A., Zenonos, Z. A., Ventocilla, J. A., Silk, S. E., Marshall, J. M., Alanine, D. G. W., Wang, C., Edwards, N. J., Leiva, K. P., Gomez-Puerta, L. A., Lucas, C. M., Wright, G. J., Long, C. A., Royal, J. M. & Draper, S. J., 26 Apr 2019

    Article in Nature Communications

  18. A glycosyl transferase family 43 protein involved in xylan biosynthesis is associated with straw digestibility in Brachypodium distachyon

    Whitehead, C., Ostos Garrido, F. J., Reymond, M., Simister, R., Distelfeld, A., Atienza, S. G., Piston, F., Gomez, L. D. & Mcqueen-Mason, S. J., 25 Mar 2018

    Article in The New phytologist

  19. A high-contiguity Brassica nigra genome localizes active centromeres and defines the ancestral Brassica genome

    Sampath, P., Koh, C. S., Jin, L., Buchwaldt, M., Higgins, E. E., Zheng, C., Sankoff, D., Robinson, S. J., Kagale, S., Navabi, Z-K., Tang, L., Horner, K. N., He, Z., Bancroft, I., Chalhoub, B., Sharpe, A. G. & Parkin, I. A. P., 10 Aug 2020

    Article in Nature Plants

  20. A methodological framework to embrace soil biodiversity

    Geisen, S., Briones, M. J. I., Gan, H., Behan-Pelletier, V. M., Friman, V-P., de Groot, G. A., Hannula, E., Lindo, Z., Philippot, L., Tiunov, A. V. & Wall, D. H., 1 Sep 2019

    Article in Soil Biology and Biochemistry

  21. A mobile ELF4 delivers circadian temperature information from shoots to roots

    Davis, S. J., Chen, W. W., Takahashi, N., Hirata, Y., Ronald, J., Porco, S., Nusinow, D. A., Kay, S. A. & Mas, P., 13 Apr 2020

    Article in Nature Plants

  22. A molecular signal integration network underpinning Arabidopsis thaliana seed germination

    Xu, H., Lantzouni, O., Bruggink, T., Benjamins, R., Lanfermeijer, F., Denby, K., Schwechheimer, C. & Bassel, G. W., 6 Aug 2020

    Article in Current Biology

  23. A national-scale assessment of climate change impacts on species: assessing the balance of risks and opportunities for multiple taxa

    Pearce-Higgins, J. W., Beale, C. M., Oliver, T., August, T., Carroll, M. J., Massimino, D., Ockendon, N., Savage, J., Wheatley, C. J., Ausden, M., Bradbury, R. B., Duffield, S., Macgregor, N., McClean, C. J., Morecroft, M. D., Thomas, C., Watts, O., Beckmann, B., Fox, R., Roy, H. E. & 3 others, Sutton, P., Walker, K. & Crick, H. Q. P., 1 Sep 2017

    Article in Biological Conservation

  24. A new look at the LTR retrotransposon content of the chicken genome

    Mason, A. S., Fulton, J. E., Hocking, P. M. & Burt, D. W., 30 Aug 2016

    Article in BMC Genomics

  25. A pan-tropical analysis of the impacts of forest degradation and conversion on local temperature

    Senior, R. A., Hill, J. K., Gonzalez del Pliego, P., Goode, L. K. & Edwards, D. P., 1 Oct 2017

    Article in Ecology and Evolution

  26. A panel of recombinant proteins from human-infective Plasmodium species for serological surveillance.

    Müller-Sienerth, N., Shilts, J., Kadir, K. A., Yman, V., Homann, M. V., Asghar, M., Ngasala, B., Singh, B., Färnert, A. & Wright, G. J., 17 Jan 2020

    Article in MALARIA JOURNAL

  27. A quantitative immunoassay for lung cancer biomarker CIZ1b in patient plasma

    Coverley, D. A., Higgins, G. S., West, D., Jackson, O. T., Dowle, A., Haslam, A., Ainscough, E., Chalkley, R. & White, J., 17 Nov 2016

    Article in Clinical Biochemistry

  28. A quantitative mass spectrometry-based approach to monitor the dynamics of endogenous chromatin-associated protein complexes

    Papachristou, EK., Kishore, K., Holding, AN., Harvey, K., Roumeliotis, TI., Chilamakuri, CSR., Omarjee, S., Chia, KM., Swarbrick, A., Lim, E., Markowetz, F., Eldridge, M., Siersbaek, R., D'Santos, CS. & Carroll, JS., 13 Jun 2018

    Article in Nature Communications

  29. A repeat protein links Rubisco to form the eukaryotic carbon-concentrating organelle

    Mackinder, L. C. M., Meyer, M. T., Mettler-Altmann, T., Chen, V. K., Mitchell, M. C., Caspari, O., Rosenzweig, E. S. F., Pallesen, L., Reeves, G., Itakura, A., Roth, R., Sommer, F., Geimer, S., Mühlhaus, T., Schroda, M., Goodenough, U., Stitt, M., Griffiths, H. & Jonikas, M. C., 24 May 2016

    Article in Proceedings of the National Academy of Sciences of the United States of America

  30. A spatial interactome reveals the protein organization of the algal CO2 concentrating mechanism

    Mackinder, L., Chen, C., Leib, R., Patena, W., Blum, S. R., Rodman, M., Ramundo, S., Adams, C. M. & Jonikas, M. C., 21 Sep 2017

    Article in Cell

  31. A structurally distinct TGF-β mimic from an intestinal helminth parasite potently induces regulatory T cells.

    Johnston, C. J. C., Smyth, D. J., Kodali, R. B., White, M. P. J., Harcus, Y., Filbey, K. J., Hewitson, J. P., Hinck, C. S., Ivens, A., Kemter, A. M., Kildemoes, A. O., Le Bihan, T., Soares, D. C., Anderton, S. M., Brenn, T., Wigmore, S. J., Woodcock, H. V., Chambers, R. C., Hinck, A. P., McSorley, H. J. & 1 others, Maizels, R. M., 23 Nov 2017

    Article in Nature Communications

  32. A transatlantic perspective on 20 emerging issues in biological engineering

    Wintle, B. C., Boehm, C. R., Rhodes, C., Molloy, J. C., Millett, P., Adam, L., Breitling, R., Carlson, R., Casagrande, R., Dando, M., Doubleday, R., Drexler, E., Edwards, B., Ellis, T., Evans, N. G., Hammond, R., Haseloff, J., Kahl, L., Kuiken, T., Lichman, B. R. & 9 others, Matthewman, C. A., Napier, J. A., ÓhÉigeartaigh, S. S., Patron, N. J., Perello, E., Shapira, P., Tait, J., Takano, E. & Sutherland, W. J., 14 Nov 2017

    Article in eLife

  33. AI for social good: unlocking the opportunity for positive impact

    Tomašev, N., Cornebise, J., Hutter, F., Mohamed, S., Picciariello, A., Ezer, D., Connelly, B., Belgrave, D. C. M., van der Haert, F. C., Mugisha, F., Abila, G., Arai, G., Arai, H., Almiraat, H., Proskurnia, J., Snyder, K., Otake-Matsuura, M., Othman, M., Glasmachers, T., de Wever, W. & 5 others, Teh, Y. W., Khan, M. E., De Winne, R., Schaul, T. & Clopath, C., 18 May 2020

    Article in Nature Communications

  34. ALS-associated missense and nonsense TBK1 mutations can both cause loss of kinase function

    de Majo, M., Topp, S. D., Smith, B. N., Nishimura, A. L., Chen, H-J., Soragia-Gkazi, A., Miller, J., Wong, C. H., Vance, C., Baas, F., ten Asbroek, A. LMA., Kenna, K. P., Ticozzi, N., Redondo, A. G., Esteban-Pérez, J., Tiloca, C., Verde, F., Duga, S., Morrison, K. E., Shaw, P. J. & 13 others, Kirby, J., Turner, M. R., Talbot, K., Hardiman, O., Glass, J. D., de Belleroche, J., Gellera, C., Ratti, A., Al-Chalabi, A., Brown Jr., R. H., Silani, V., Landers, J. E. & Shaw, C. E., 25 Jun 2018

    Article in Neurobiology of Aging

  35. ATP-dependent dynamic protein aggregation regulates bacterial dormancy depth critical for antibiotic tolerance

    Pu, Y., Li, Y., Jin, X., Tian, T., Ma, Q., Zhao, Z., Lin, S., Chen, Z., Li, B., Yao, G., Leake, M. C., Lo, C-J. & Bai, F., 3 Jan 2019

    Article in Molecular Cell

  36. AXR3 and SHY2 interact to regulate root hair development

    Knox, K., Grierson, C. S. & Leyser, O., Dec 2003

    Article in Development

  37. Abnormal visual gain control in a Parkinson's disease model

    Afsari, F., Christensen, K., Smith, G., Hentzer, M., Nippe, O., Elliott, C. & Wade, A., 1 Sep 2014

    Article in Human Molecular Genetics

  38. Adaptation of Plasmodium falciparum to humans involved the loss of an ape-specific erythrocyte invasion ligand.

    Proto, W. R., Siegel, S. V., Dankwa, S., Liu, W., Kemp, A., Marsden, S., Zenonos, Z. A., Unwin, S., Sharp, P. M., Wright, G. J., Hahn, B. H., Duraisingh, M. T. & Rayner, J. C., 4 Oct 2019

    Article in Nature Communications

  39. Adaptation of the carbamoyl-phosphate synthetase (CPS) enzyme in an extremophile fish

    White, L., Sutton, G., Shechonge, A., Day, J., Dasmahapatra, K. K. & Pownall, B., 21 Sep 2020, (Accepted/In press)

    Article in Royal Society Open Science

  40. Adherence to the iDSI reference case among published cost-per-DALY averted studies

    Emerson, J., Panzer, A., Cohen, J. T., Chalkidou, K., Teerawattananon, Y., Wilkinson, T., Walker, D., Neumann, P. J. & Kim, D. D., 1 May 2019

    Article in PLoS ONE

  41. Agri-environment conservation set-asides have co-benefits for connectivity

    Threadgill, K., McClean, C. J., Hodgson, J. A., Jones, N. & Hill, J. K., 28 May 2020, (Accepted/In press)

    Article in Ecography

  42. Allosteric Regulation of Fibronectin/α5β1 Interaction by Fibronectin-Binding MSCRAMMs

    Liang, X., Garcia, B. L., Visai, L., Prabhakaran, S., Meenan, N. A. G., Potts, J. R., Humphries, M. J. & Höök, M., 19 Jul 2016

    Article in PLoS ONE

  43. Alpha-v-containing integrins are host receptors for the Plasmodium falciparum sporozoite surface protein, TRAP.

    Dundas, K., Shears, M. J., Sun, Y., Hopp, C. S., Crosnier, C., Metcalf, T., Girling, G., Sinnis, P., Billker, O. & Wright, G. J., 24 Apr 2018

    Article in Proceedings of the National Academy of Sciences USA

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