Search research publications and outputs

  1. 2011
  2. Application and comparison of large-scale solution-based DNA capture-enrichment methods on ancient DNA

    Ávila-Arcos, M. C., Cappellini, E., Romero-Navarro, J. A., Wales, N., Moreno-Mayar, J. V., Rasmussen, M., Fordyce, S. L., Montiel, R., Vielle-Calzada, J. P., Willerslev, E. & Gilbert, M. T. P., 2011

    Article in Scientific Reports

  3. Basigin is a receptor essential for erythrocyte invasion by Plasmodium falciparum.

    Crosnier, C., Bustamante, L. Y., Bartholdson, S. J., Bei, A. K., Theron, M., Uchikawa, M., Mboup, S., Ndir, O., Kwiatkowski, D. P., Duraisingh, M. T., Rayner, J. C. & Wright, G. J., 2011

    Article in Nature

  4. Bladder Tissue Regeneration

    Baker, S. C. & Southgate, J., 2011, Electrospinning for tissue regeneration. Woodhead Publishing, p. 225-241 17 p.

    Research output: Chapter in Book/Report/Conference proceedingChapter

  5. Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania

    Rogers, M. B., Hilley, J. D., Dickens, N. J., Wilkes, J., Bates, P. A., Depledge, D. P., Harris, D., Her, Y., Herzyk, P., Imamura, H., Otto, T. D., Sanders, M., Seeger, K., Dujardin, J-C., Berriman, M., Smith, D. F., Hertz-Fowler, C. & Mottram, J. C., 2011

    Article in Genome Research

  6. Conserved cysteine residues in the mammalian lamin A tail are essential for cellular resposes to ROS generation.

    Edwards, R., Pekovic,V., Gibbs-Seymour, I., Markiewicz, E., Alzoghaibi, F., Benham, A.M, Wenhert, M., von Zglinicki, T. & Hutchison, C.J, 2011

    Article in Aging Cell

  7. Degeneracy Enriches Artificial Chemistry Binding Systems

    Clark, E., Nellis, A., Hickinbotham, S., Stepney, S., Clarke, T., Pay, M. & Young, P., 2011.

    Research output: Contribution to conferencePaperpeer-review

  8. DeltaC and DeltaD interact as Notch ligands in the zebrafish segmentation clock.

    Wright, G. J., Giudicelli, F., Soza-Ried, C., Hanisch, A., Ariza-McNaughton, L. & Lewis, J., 2011

    Article in Development

  9. Distributed Decisions: New Insights from Radio-Tagged Ants

    Robinson, E. J. H. & Mandecki, W., 2011, Ant Colonies: Behavior in Insects & Computer Applications. Sun, E. C. (ed.). New York: Nova Science Publishers, p. 109-128

    Research output: Chapter in Book/Report/Conference proceedingChapter

  10. Embodied genomes and metaprogramming

    Hickinbotham, S., Stepney, S., Nellis, A., Clarke, T., Clark, E., Pay, M. & Young, P., 2011.

    Research output: Contribution to conferencePaperpeer-review

  11. G(12/13) signaling pathways substitute for integrin αIIbβ3-signaling for thromboxane generation in platelets

    Bhavaraju, K., Lakhani, P. R., Dorsam, R. T., Jin, J., Hitchcock, I. S., Sanjay, A. & Kunapuli, S. P., 2011

    Article in PLoS ONE

  12. Global climate and extinction: evidence from the fossil record

    Mayhew, P. J., 2011, Climate Change, Ecology and Systematics. Hodkinson, T., Jones, M., Waldren, S. & Parnell, J. (eds.). Cambridge: Cambridge University Press, p. 99-121

    Research output: Chapter in Book/Report/Conference proceedingChapter

  13. High temperature and bacteriophages can indirectly select for bacterial pathogenicity in environmental reservoirs

    Friman, V-P., Hiltunen, T., Jalasvuori, M., Lindstedt, C., Laanto, E., Örmälä, A-M., Laakso, J., Mappes, J. & Bamford, J. K. H., 2011

    Article in PLoS ONE

  14. PoolHap: Inferring haplotype frequencies from pooled samples by next generation sequencing

    Long, Q., Jeffares, D. C., Zhang, Q., Ye, K., Nizhynska, V., Ning, Z., Tyler-Smith, C. & Nordborg, M., 2011

    Article in PLoS ONE

  15. The blood-stage malaria antigen PfRH5 is susceptible to vaccine-inducible cross-strain neutralizing antibody. Nature Communications

    Douglas, A. D., Williams, A. R., Illingworth, J. J., Kamuyu, G., Biswas, S., Goodman, A. L., Wyllie, D. H., Crosnier, C., Miura, K., Wright, G. J., Long, C. A., Osier, F. H., Marsh, K., Turner, A. V., Hill, A. V. S. & Draper, S. J., 2011

    Article in Nature Communications

  16. Towards Argument-Driven Validation of an in silico Model of Immune Tissue Organogenesis

    Alden, K. J., Andrews, PAUL. S., Timmis, J., Viega-Fernandes, H. & Coles, M. C., 2011, Proceedings of 10th International Conference on Artificial Immune Systems. Lecture Notes in Computer Science, Vol. 6825. p. 66-70 5 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  17. Asymmetric boundary shifts of tropical montane Lepidoptera over four decades of climate warming

    Chen, I-C., Hill, J. K., Shiu, H-J., Holloway, J. D., Benedick, S., Chey, V. K., Barlow, H. S. & Thomas, C. D., Jan 2011

    Article in Global ecology and biogeography

  18. Global warming, elevational ranges and the vulnerability of tropical biota

    Laurance, W. F., Useche, D. C., Shoo, L. P., Herzog, S. K., Kessler, M., Escobar, F., Brehm, G., Axmacher, J. C., Chen, I-C., Arellano Gamez, L., Hietz, P., Fiedler, K., Pyrcz, T., Wolf, J., Merkord, C. L., Cardelus, C., Marshall, A. R., Ah-Peng, C., Aplet, G. H., del Coro Arizmendi, M. & 33 others, Baker, W. J., Barone, J., Bruehl, C. A., Bussmann, R. W., Cicuzza, D., Eilu, G., Favila, M. E., Hemp, A., Hemp, C., Homeier, J., Hurtado, J., Jankowski, J., Kattan, G., Kluge, J., Kroemer, T., Lees, D. C., Lehnert, M., Longino, J. T., Lovett, J., Martin, P. H., Patterson, B. D., Pearson, R. G., Peh, K. S-H., Richardson, B., Richardson, M., Samways, M. J., Senbeta, F., Smith, T. B., Utteridge, T. M. A., Watkins, J. E., Wilson, R., Williams, S. E. & Thomas, C. D., Jan 2011

    Article in Biological Conservation

  19. Habitat microclimates drive fine-scale variation in extreme temperatures

    Suggitt, A. J., Gillingham, P. K., Hill, J. K., Huntley, B., Kunin, W. E., Roy, D. B. & Thomas, C. D., Jan 2011

    Article in Oikos

  20. Leishmania amazonensis META2 protein confers protection against heat shock and oxidative stress

    Ramos, C. S., Yokoyama-Yasunaka, J. K. U., Guerra-Giraldez, C., Price, H. P., Mortara, R. A., Smith, D. F. & Uliana, S. R. B., Jan 2011

    Article in Experimental parasitology

  21. Vapyrin, a gene essential for intracellular progression of arbuscular mycorrhizal symbiosis, is also essential for infection by rhizobia in the nodule symbiosis of Medicago truncatula

    Murray, J. D., Muni, R. R. D., Torres-Jerez, I., Tang, Y., Allen, S., Andriankaja, M., Li, G., Laxmi, A., Cheng, X., Wen, J., Vaughan, D., Schultze, M., Sun, J., Charpentier, M., Oldroyd, G., Tadege, M., Ratet, P., Mysore, K. S., Chen, R. & Udvardi, M. K., Jan 2011

    Article in Plant Journal

  22. A novel epigenetic phenotype associated with the most aggressive pathway of bladder tumor progression

    Vallot, C., Stransky, N., Bernard-Pierrot, I., Hérault, A., Zucman-Rossi, J., Chapeaublanc, E., Vordos, D., Laplanche, A., Benhamou, S., Lebret, T., Southgate, J., Allory, Y. & Radvanyi, F., 5 Jan 2011

    Article in Journal of the National Cancer Institute

  23. EVOLUTIONARY BIOLOGY Catfish mimics

    Mallet, J. & Dasmahapatra, K., 6 Jan 2011

    Editorial in Nature

  24. Microarray estimation of genomic inter-strain variability in the genus Ectocarpus (Phaeophyceae)

    Dittami, S. M., Proux, C., Rousvoal, S., Peters, A. F., Cock, J. M., Coppée, J-Y., Boyen, C. & Tonon, T., 13 Jan 2011

    Article in BMC Molecular Biology

  25. Cooperative binding and activation of fibronectin by a bacterial surface protein

    Marjenberg, Z. R., Ellis, I. R., Hagan, R. M., Prabhakaran, S., Höök, M., Talay, S. R., Potts, J. R., Staunton, D. & Schwarz-Linek, U., 21 Jan 2011

    Article in The Journal of biological chemistry

  26. Cloning, tissue expression analysis, and functional characterization of two Δ6-desaturase variants of sea bass (Dicentrarchus labrax L.)

    Santigosa, E., Geay, F., Tonon, T., Le Delliou, H., Kuhl, H., Reinhardt, R., Corcos, L., Cahu, C., Zambonino-Infante, J. L. & Mazurais, D., Feb 2011

    Article in Marine biotechnology (New York, N.Y.)

  27. In vitro conservation of European bryophytes

    Rowntree, J. K., Pressel, S., Ramsay, M. M., Sabovljevic, A. & Sabovljevic, M., Feb 2011

    Literature review in In vitro cellular & developmental biology-Plant

  28. Mannitol-1-phosphate dehydrogenase activity in Ectocarpus siliculosus, a key role for mannitol synthesis in brown algae

    Rousvoal, S., Groisillier, A., Dittami, S. M., Michel, G., Boyen, C. & Tonon, T., Feb 2011

    Article in Planta

  29. Identification of adult nephron progenitors capable of kidney regeneration in zebrafish

    Diep, C. Q., Ma, D., Deo, R. C., Holm, T. M., Naylor, R. W., Arora, N., Wingert, R. A., Bollig, F., Djordjevic, G., Lichman, B., Zhu, H., Ikenaga, T., Ono, F., Englert, C., Cowan, C. A., Hukriede, N. A., Handin, R. I. & Davidson, A. J., 3 Feb 2011

    Article in Nature

  30. High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation

    Breeze, E., Harrison, E., McHattie, S., Hughes, L., Hickman, R., Hill, C., Kiddle, S., Kim, Y. S., Penfold, C. A., Jenkins, D., Zhang, C., Morris, K., Jenner, C., Jackson, S., Thomas, B., Tabrett, A., Legaie, R., Moore, J. D., Wild, D. L., Ott, S. & 5 others, Rand, D., Beynon, J., Denby, K., Mead, A. & Buchanan-Wollaston, V., Mar 2011

    Article in The Plant Cell

  31. Interaction of Rep and DnaB on DNA

    Atkinson, J., Gupta, M. K. & McGlynn, P., Mar 2011

    Article in Nucleic Acids Research

  32. Transplantation of autologous differentiated urothelium in an experimental model of composite cystoplasty

    Turner, A., Subramanian, R., Thomas, D. F. M., Hinley, J., Abbas, S. K., Stahlschmidt, J. & Southgate, J., Mar 2011

    Article in European Urology

  33. Dioxin receptor and SLUG transcription factors regulate the insulator activity of B1 SINE retrotransposons via an RNA polymerase switch

    Román, A. C., González-Rico, F. J., Fernández-Salguero, P. M., Moltó, E., Vicente-Garcia, C., Montoliu, L., Hernando, H., Ballestar, E., Neto, A., Gómez-Skarmeta, J. L., Vavrova-Anderson, J. & White, R. J., 1 Mar 2011

    Article in Genome Research

  34. Use of macrophages to target therapeutic adenovirus to human prostate tumors

    Muthana, M., Giannoudis, A., Scott, S. D., Fang, H-Y., Coffelt, S. B., Morrow, F. J., Murdoch, C., Burton, J., Cross, N., Burke, B., Mistry, R., Hamdy, F., Brown, N. J., Georgopoulos, L., Hoskin, P., Essand, M., Lewis, C. E. & Maitland, N. J., 1 Mar 2011

    Article in Cancer research

  35. Atypical chemokine receptors

    Ulvmar, M. H., Hub, E. & Rot, A., 10 Mar 2011

    Article in Experimental cell research

  36. BIM(EL), an intrinsically disordered protein, is degraded by 20S proteasomes in the absence of poly-ubiquitylation

    Wiggins, C. M., Tsvetkov, P., Johnson, M., Joyce, C. L., Lamb, C. A., Bryant, N. J., Komander, D., Shaul, Y. & Cook, S. J., 15 Mar 2011

    Article in Journal of Cell Science

  37. The circadian oscillator gene GIGANTEA mediates a long-term response of the Arabidopsis thaliana circadian clock to sucrose

    Dalchau, N., Baek, S. J., Briggs, H. M., Robertson, F. C., Dodd, A. N., Gardner, M. J., Stancombe, M. A., Haydon, M. J., Stan, G-B., Gonçalves, J. M. & Webb, A. A. R., 22 Mar 2011

    Article in Proceedings of the National Academy of Sciences of the United States of America

  38. A DELLA in Disguise: SPATULA Restrains the Growth of the Developing Arabidopsis Seedling

    Josse, E-M., Gan, Y., Bou-Torrent, J., Stewart, K. L., Gilday, A. D., Jeffree, C. E., Vaistij, F. E., Martinez-Garcia, J. F., Nagy, F., Graham, I. A. & Halliday, K. J., Apr 2011

    Article in The Plant Cell

  39. A framework for assessing threats and benefits to species responding to climate change

    Thomas, C. D., Hill, J. K., Anderson, B. J., Bailey, S., Beale, C. M., Bradbury, R. B., Bulman, C. R., Crick, H. Q. P., Eigenbrod, F., Griffiths, H. M., Kunin, W. E., Oliver, T. H., Walmsley, C. A., Watts, K., Worsfold, N. T. & Yardley, T., Apr 2011

    Article in Methods in ecology and evolution

  40. Knowledge gaps in soil carbon and nitrogen interactions: from molecular to global scale

    Gardenas, A. I., Agren, G. I., Bird, J. A., Clarholm, M., Hallin, S., Ineson, P., Katterer, T., Knicker, H., Nilsson, S. I., Nasholm, T., Ogle, S., Paustian, K., Persson, T. & Stendahl, J., Apr 2011

    Literature review in Soil Biology and Biochemistry

  41. Major players on the microbial stage: why Archaea are important

    Jarrell, K. F., Walters, A. D., Bochiwal, C., Borgia, J. M., Dickinson, T. & Chong, J. P. J., Apr 2011

    Article in Microbiology (Reading, England)

  42. Molecular breeding of polymerases for resistance to environmental inhibitors

    Baar, C., d'Abbadie, M., Vaisman, A., Arana, M. E., Hofreiter, M., Woodgate, R., Kunkel, T. A. & Holliger, P., Apr 2011

    Article in Nucleic Acids Research

  43. RNAi screening of Drosophila (Sophophora) melanogaster S2 cells for ricin sensitivity and resistance

    Pawar, V., De, A., Briggs, L., Omar, M. M., Sweeney, S. T., Lord, J. M., Roberts, L. M., Spooner, R. A. & Moffat, K. G., Apr 2011

    Article in Journal of biomolecular screening

  44. Serine recombinases as tools for genome engineering

    Brown, W. R. A., Lee, N. C. O., Xu, Z. & Smith, M. C. M., Apr 2011

    Literature review in Methods

  45. Experience-dependent flexibility in collective decision-making by house-hunting ants

    Stroeymeyt, N., Robinson, E. J. H., Hogan, P. M., Marshall, J. A. R., Giurfa, M. & Franks, N. R., May 2011

    Article in Behavioral Ecology

  46. Improving assessment and modelling of climate change impacts on global terrestrial biodiversity

    McMahon, S. M., Harrison, S. P., Armbruster, W. S., Bartlein, P. J., Beale, C. M., Edwards, M. E., Kattge, J., Midgley, G., Morin, X. & Prentice, I. C., May 2011

    Article in Trends in Ecology & Evolution

  47. Multiple roles for plant glutathione transferases in xenobiotic detoxification.

    Edwards, R., Cummins, I., Dixon, D.P, Freitag-Pohl, S. & Skipsey, M., May 2011

    Article in Drug metabolism reviews

  48. Prospects of stem cell therapy in osteoarthritis

    Genever, P., McCaskie, A., Bari, C. D. & Roberts, S., May 2011

    Article in REGENERATIVE MEDICINE

  49. Results from the first national UK inter-laboratory calibration for very short-lived halocarbons

    Jones, C. E., Andrews, S. J., Carpenter, L. J., Hogan, C., Hopkins, F. E., Laube, J. C., Robinson, A. D., Spain, T. G., Archer, S. D., Harris, N. R. P., Nightingale, P. D., O'Doherty, S. J., Oram, D. E., Pyle, J. A., Butler, J. H. & Hall, B. D., May 2011

    Article in Atmospheric Measurement Techniques

  50. Impact of daily temperature fluctuations on dengue virus transmission by Aedes aegypti

    Lambrechts, L., Paaijmans, K. P., Fansiri, T., Carrington, L. B., Kramer, L. D., Thomas, M. B. & Scott, T. W., 3 May 2011

    Article in Proceedings of the National Academy of Sciences of the United States of America

  51. Simple Rules for Efficient Assembly Predict the Layout of a Packaged Viral RNA

    Dykeman, E. C., Grayson, N. E., Toropova, K., Twarock, R., Ranson, N. A. & Stockley, P. G., 6 May 2011

    Article in Journal of Molecular Biology

  52. Genome-wide dynamics of a bacterial response to antibiotics that target the cell envelope

    Hesketh, A., Hill, C., Mokhtar, J., Novotna, G., Tran, N., Bibb, M. & Hong, H-J., 11 May 2011

    Article in BMC Genomics

  53. High-throughput analysis of single hematopoietic stem cell proliferation in microfluidic cell culture arrays.

    Lecault, V., Vaninsberghe, M., Sekulovic, S., Knapp, DJHF., Wohrer, S., Bowden, W., Viel, F., McLaughlin, T., Jarandehei, A., Miller, M., Falconnet, D., White, AK., Kent, DG., Copley, MR., Taghipour, F., Eaves, CJ., Humphries, RK., Piret, JM. & Hansen, CL., 22 May 2011

    Article in Nature Methods

  54. A phage protein that binds phi C31 integrase to switch its directionality

    Khaleel, T., Younger, E., McEwan, A. R., Varghese, A. S. & Smith, M. C. M., Jun 2011

    Article in Molecular Microbiology

  55. Frontiers in climate change-disease research

    Rohr, J. R., Dobson, A. P., Johnson, P. T. J., Kilpatrick, A. M., Paull, S. H., Raffel, T. R., Ruiz-Moreno, D. & Thomas, M. B., Jun 2011

    Review article in Trends in Ecology and Evolution

  56. Recreational ketamine: from pleasure to pain

    Wood, D., Cottrell, A., Baker, S. C., Southgate, J., Harris, M., Fulford, S., Woodhouse, C. & Gillatt, D., Jun 2011

    Article in BJU International

  57. Search for a 2-quasiparticle high-K isomer in (256)Rf

    Robinson, A. P., Khoo, T. L., Seweryniak, D., Ahmad, I., Asai, M., Back, B. B., Carpenter, M. P., Chowdhury, P., Davids, C. N., Greene, J., Greenlees, P. T., Hauschild, K., Heinz, A., Herzberg, R. -D., Janssens, R. V. F., Jenkins, D. G., Jones, G. D., Ketelhut, S., Kondev, F. G., Lauritsen, T. & 13 others, Lister, C. J., Lopez-Martens, A., Marley, P., McCutchan, E., Papadakis, P., Peterson, D., Qian, J., Rostron, D., Shirwadkar, U., Stefanescu, I., Tandel, S. K., Wang, X. & Zhu, S., 13 Jun 2011

    Article in Physical Review C

  58. Pseudomonas aeruginosa Population Diversity and Turnover in Cystic Fibrosis Chronic Infections

    Mowat, E., Paterson, S., Fothergill, J. L., Wright, E. A., Ledson, M. J., Walshaw, M. J., Brockhurst, M. A. & Winstanley, C., 15 Jun 2011

    Article in American Journal of Respiratory and Critical Care Medicine

  59. A systematic mutagenesis-driven strategy for site-resolved NMR studies of supramolecular assemblies

    Amero, C., Dura, M. A., Noirclerc-Savoye, M., Perollier, A., Gallet, B., Plevin, M. J., Vernet, T., Franzetti, B. & Boisbouvier, J., Jul 2011

    Article in JOURNAL OF BIOMOLECULAR NMR

  60. Baculoviruses as gene therapy vectors for human prostate cancer

    Rivera-Gonzalez, G. C., Swift, S. L., Dussupt, V., Georgopoulos, L. J. & Maitland, N. J., Jul 2011

    Article in Journal of invertebrate pathology

  61. Balancing alternative land uses in conservation prioritization

    Moilanen, A., Anderson, B. J., Eigenbrod, F., Heinemeyer, A., Roy, D. B., Gillings, S., Armsworth, P. R., Gaston, K. J. & Thomas, C. D., Jul 2011

    Article in ECOLOGICAL APPLICATIONS

  62. Functional interaction of the circadian clock and UV RESISTANCE LOCUS 8-controlled UV-B signaling pathways in Arabidopsis thaliana

    Fehér, B., Kozma-Bognár, L., Kevei, E., Hajdu, A., Binkert, M., Davis, S. J., Schäfer, E., Ulm, R. & Nagy, F., Jul 2011

    Article in The Plant journal

  63. Immortalisation of normal human urothelial cells compromises differentiation capacity

    Georgopoulos, N. T., Kirkwood, L. A., Varley, C. L., Maclaine, N. J., Aziz, N. & Southgate, J., Jul 2011

    Article in European Urology

  64. High-affinity IgE receptors on dendritic cells exacerbate Th2-dependent inflammation

    Sallmann, E., Reininger, B., Brandt, S., Duschek, N., Hoflehner, E., Garner-Spitzer, E., Platzer, B., Dehlink, E., Hammer, M., Holcmann, M., Oettgen, H. C., Wiedermann, U., Sibilia, M., Fiebiger, E., Rot, A. & Maurer, D., 1 Jul 2011

    Article in Journal of Immunology

  65. Cell of origin in AML: susceptibility to MN1-induced transformation is regulated by the MEIS1/AbdB-like HOX protein complex.

    Heuser, M., Yun, H., Berg, T., Yung, E., Argiropoulos, B., Kuchenbauer, F., Park, G., Hamwi, I., Palmqvist, L., Lai, CK., Leung, M., Lin, G., Chaturvedi, A., Thakur, BK., Iwasaki, M., Bilenky, M., Thiessen, N., Robertson, G., Hirst, M., Kent, D. & 7 others, Wilson, NK., Göttgens, B., Eaves, C. J., Cleary, ML., Marra, M., Ganser, A. & Humphries, RK., 12 Jul 2011

    Article in Cancer Cell

  66. Controlling Legged Robots with Coupled Artificial Biochemical Networks

    Lones, M. A., Tyrrell, A. M., Stepney, S. & Caves, L. S. D., Aug 2011, p. 465-472.

    Research output: Contribution to conferencePaperpeer-review

  67. Discovery of lost diversity of paternal horse lineages using ancient DNA

    Lippold, S., Knapp, M., Kuznetsova, T., Leonard, J. A., Benecke, N., Ludwig, A., Rasmussen, M., Cooper, A., Weinstock, J., Willerslev, E., Shapiro, B. & Hofreiter, M., Aug 2011

    Article in Nature Communications

  68. Faunal histories from Holocene ancient DNA

    de Bruyn, M., Hoelzel, A. R., Carvalho, G. R. & Hofreiter, M., Aug 2011

    Literature review in Trends in Ecology & Evolution

  69. Mannitol in six autotrophic stramenopiles and Micromonas

    Dittami, S. M., Aas, H. T. N., Paulsen, B. S., Boyen, C., Edvardsen, B. & Tonon, T., Aug 2011

    Article in Plant Signaling and Behavior

  70. Molecular determinants involved in activation of caspase 7

    Boucher, D., Blais, V., Drag, M. & Denault, J-B., Aug 2011

    Article in Bioscience Reports

  71. Dissecting the genome of the polyploid crop oilseed rape by transcriptome sequencing

    Bancroft, I., Morgan, C., Fraser, F., Higgins, J., Wells, R., Clissold, L., Trick, M., Baker, D., Long, Y., Meng, J., Wang, X. & Liu, S., 1 Aug 2011

    Article in Nature Biotechnology

  72. LYMPHOID-DEFICIENT HEMATOPOIETIC STEM CELLS APPEAR IN MICE BEFORE BIRTH AND EXPAND RAPIDLY AND PREFERENTIALLY THEREAFTER

    Benz, C., Copley, M. R., Kent, D., Wohrer, S., Rowe, K. M., Day, C., Cortes, A., Aghaeepour, N., Brinkman, R. & Eaves, CJ., 1 Aug 2011

    Article in Experimental hematology

  73. tRNA genes protect a reporter gene from epigenetic silencing in mouse cells

    Ebersole, T., Kim, J-H., Samoshkin, A., Kouprina, N., Larionov, V., Pavlicek, A. & White, R. J., 15 Aug 2011

    Article in Cell cycle

  74. Proteomic analysis of secretory products from the model gastrointestinal nematode Heligmosomoides polygyrus reveals dominance of venom allergen-like (VAL) proteins

    Hewitson, J. P., Harcus, Y., Murray, J., van Agtmaal, M., Filbey, K. J., Grainger, J. R., Bridgett, S., Blaxter, M. L., Ashton, P. D., Ashford, D. A., Curwen, R. S., Wilson, R. A., Dowle, A. A. & Maizels, R. M., 24 Aug 2011

    Article in JOURNAL OF PROTEOMICS

  75. Lethal and pre-lethal effects of a fungal biopesticide contribute to substantial and rapid control of malaria vectors

    Blanford, S., Shi, W., Christian, R., Marden, J. H., Koekemoer, L. L., Brooke, B. D., Coetzee, M., Read, A. F. & Thomas, M. B., 29 Aug 2011

    Article in PLoS ONE

  76. A Biochemical-Biophysical Study of Hemoglobins from Woolly Mammoth, Asian Elephant, and Humans

    Yuan, Y., Shen, T-J., Gupta, P., Ho, N. T., Simplaceanu, V., Tam, T. C. S., Hofreiter, M., Cooper, A., Campbell, K. L. & Ho, C., 30 Aug 2011

    Article in Biochemistry

  77. Metabolomic approaches reveal that cell wall modifications play a major role in ethylene-mediated resistance against Botrytis cinerea

    Lloyd, A. J., William Allwood, J., Winder, C. L., Dunn, W. B., Heald, J. K., Cristescu, S. M., Sivakumaran, A., Harren, F. J. M., Mulema, J., Denby, K., Goodacre, R., Smith, A. R. & Mur, L. A. J., Sep 2011

    Article in Plant Journal

  78. Spatial covariation between freshwater and terrestrial ecosystem services

    Holland, R. A., Eigenbrod, F., Armsworth, P. R., Anderson, B. J., Thomas, C. D., Heinemeyer, A., Gillings, S., Roy, D. B. & Gaston, K. J., Sep 2011

    Article in ECOLOGICAL APPLICATIONS

  79. Enhanced pro-inflammatory cytokine responses following Toll-like-receptor ligation in Schistosoma haematobium-infected schoolchildren from rural Gabon

    Meurs, L., Labuda, L., Amoah, A. S., Mbow, M., Ngoa, U. A., Boakye, D. A., Mboup, S., Dièye, T. N., Mountford, A. P., Turner, J. D., Kremsner, P. G., Polman, K., Yazdanbakhsh, M. & Adegnika, A. A., 8 Sep 2011

    Article in PLoS ONE

  80. Seniority, collectivity, and B(E2) enhancement in Ni-72

    Chiara, C. J., Walters, W. B., Stefanescu, I., Alcorta, M., Carpenter, M. P., Fornal, B., Guerdal, G., Hoffman, C. R., Janssens, R. V. F., Kay, B. P., Kondev, F. G., Krolas, W., Lauritsen, T., Lister, C. J., McCutchan, E. A., Pawlat, T., Rogers, A. M., Seweryniak, D., Sharp, N., Wrzesinski, J. & 1 others, Zhu, S., 19 Sep 2011

    Article in Physical Review C

  81. Archaeal surface appendages: their function and the critical role of N-linked glycosylation in their assembly

    Jarrell, K. F., Nair, D. B., Jones, G. M., Aizawa, S-I., Chong, J. P. J., Stark, M., Logan, S. M., Vinogradov, E. & Kelly, J. F., 23 Sep 2011

    Article in Proc. SPIE

  82. Exponential asymptotics of homoclinic snaking

    Dean, A. D., Matthews, P., Cox, S. & King, J., 28 Sep 2011

    Article in Nonlinearity

  83. A novel thermosensitive escape behavior in Drosophila larvae

    Oswald, M., Rymarczyk, B., Chatters, A. & Sweeney, S., Oct 2011

    Article in Fly

  84. Differential expression and characterization of a member of the mucin-associated surface protein family secreted by Trypanosoma cruzi.

    De Pablos Torro, L. M., Gonzalez, G., Solano, J., Seco Hidalgo, V., Diaz Lozano, I. M., Gomez samblas, M. M., Cruz Bustos, T. & Osuna, A., Oct 2011

    Article in Infection and Immunity

  85. Health: Wealth versus warming

    Paaijmans, K. P. & Thomas, M. B., Oct 2011

    Comment/debate in Nature Climate Change

  86. Regenerative medicine in urology

    Wezel, F., Southgate, J. & Thomas, D. F. M., Oct 2011

    Literature review in BJU International

  87. The genome of the mesopolyploid crop species Brassica rapa

    Wang, X., Wang, H., Wang, J., Sun, R., Wu, J., Liu, S., Bai, Y., Mun, J-H., Bancroft, I., Cheng, F., Huang, S., Li, X., Hua, W., Wang, J., Wang, X., Freeling, M., Pires, J. C., Paterson, A. H., Chalhoub, B., Wang, B. & 31 others, Hayward, A., Sharpe, A. G., Park, B-S., Weisshaar, B., Liu, B., Li, B., Liu, B., Tong, C., Song, C., Duran, C., Peng, C., Geng, C., Koh, C., Lin, C., Edwards, D., Mu, D., Shen, D., Soumpourou, E., Li, F., Fraser, F., Conant, G., Lassalle, G., King, G. J., Bonnema, G., Tang, H., Wang, H., Belcram, H., Zhou, H., Hirakawa, H., Wang, Y. & Brassica rapa Genome Sequencing Project Consortium, Oct 2011

    Article in Nature genetics

  88. True single-molecule DNA sequencing of a pleistocene horse bone

    Orlando, L., Ginolhac, A., Raghavan, M., Vilstrup, J., Rasmussen, M., Magnussen, K., Steinmann, K. E., Kapranov, P., Thompson, J. F., Zazula, G., Froese, D., Moltke, I., Shapiro, B., Hofreiter, M., Al-Rasheid, K. A. S., Gilbert, M. T. P. & Willerslev, E., Oct 2011

    Article in Genome Research

  89. Pol III binding in six mammals shows conservation among amino acid isotypes despite divergence among tRNA genes

    Kutter, C., Brown, G. D., Wilson, M. D., Watt, S., Odom, D. T., Gonçalves, Å., Brazma, A. & White, R. J., 1 Oct 2011

    Article in Nature genetics

  90. Proto-oncogene PBF/PTTG1IP regulates thyroid cell growth and represses radioiodide treatment

    Read, M. L., Lewy, G. D., Fong, J. C. W., Sharma, N., Seed, R. I., Smith, V. E., Gentilin, E., Warfield, A., Eggo, M. C., Knauf, J. A., Leadbeater, W. E., Watkinson, J. C., Franklyn, J. A., Boelaert, K. & McCabe, C. J., 1 Oct 2011

    Article in Cancer research

  91. Voltage-Gated Na+ Channel beta 1B: A Secreted Cell Adhesion Molecule Involved in Human Epilepsy

    Patino, G. A., Brackenbury, W. J., Bao, Y., Lopez-Santiago, L. F., O'Malley, H. A., Chen, C., Calhoun, J. D., Lafreniere, R. G., Cossette, P., Rouleau, G. A. & Isom, L. L., 12 Oct 2011

    Article in Journal of neuroscience

  92. Degenerate RNA Packaging Signals in the Genome of Satellite Tobacco Necrosis Virus: Implications for the Assembly of a T=1 Capsid

    Bunka, D. H. J., Lane, S. W., Lane, C. L., Dykeman, E. C., Ford, R. J., Barker, A. M., Twarock, R., Phillips, S. E. V. & Stockley, P. G., 14 Oct 2011

    Article in Journal of Molecular Biology

  93. High throughput discovery of heteroaromatic-modifying enzymes allows enhancement of novobiocin selectivity

    Patel, S. M., de la Fuente, M., Ke, S., Guimaraes, A. M. R., Oliyide, A. O., Ji, X., Stapleton, P., Osbourn, A., Pan, Y., Bowles, D. J., Davis, B. G., Schatzlein, A. & Yang, M., 14 Oct 2011

    Article in Chemical Communications

  94. Ontogeny stage-independent and high-level clonal expansion in vitro of mouse hematopoietic stem cells stimulated by an engineered NUP98-HOX fusion transcription factor.

    Sekulovic, S., Gasparetto, M., Lecault, V., Hoesli, CA., Kent, DG., Rosten, P., Wan, A., Brookes, C., Hansen, CL. & Piret, JM., 20 Oct 2011

    Article in Blood

  95. Convergent patterns of long-distance nocturnal migration in noctuid moths and passerine birds

    Alerstam, T., Chapman, J. W., Backman, J., Smith, A. D., Karlsson, H., Nilsson, C., Reynolds, D. R., Klaassen, R. H. G. & Hill, J. K., 22 Oct 2011

    Article in PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

  96. Integrating ecology into macroevolutionary research

    McInnes, L., Baker, W. J., Barraclough, T. G., Dasmahapatra, K. K., Goswami, A., Harmon, L. J., Morlon, H., Purvis, A., Rosindell, J., Thomas, G. H., Turvey, S. T. & Phillimore, A. B., 23 Oct 2011

    Editorial in Biology letters

  97. Colours of domestication

    Cieslak, M., Reissmann, M., Hofreiter, M. & Ludwig, A., Nov 2011

    Article in Biological reviews

  98. Legume-nodulating betaproteobacteria: diversity, host range and future prospects

    Gyaneshwar, P., Hirsch, A., Moulin, L., Chen, W-M., Elliott, G. N., Bontemps, C., Estrada de los Santos, P., Gross, E., Sprent, J. I., Young, P. & James, E. K., Nov 2011

    Article in MOLECULAR PLANT-MICROBE INTERACTIONS

  99. Over-expression of an Na+- and K+-permeable HKT transporter in barley improves salt tolerance

    Mian, A., Oomen, R. J. F. J., Isayenkov, S., Sentenac, H., Maathuis, F. J. M. & Very, A-A., Nov 2011

    Article in Plant Journal

  100. Population genomics of Sinorhizobium medicae based on low-coverage sequencing of sympatric isolates

    Bailly, X., Giuntini, E., Sexton, M. C., Lower, R. P. J., Harrison, P. W., Kumar, N. & Young, J. P. W., Nov 2011

    Article in The ISME Journal

  101. Heligmosomoides polygyrus elicits a dominant nonprotective antibody response directed against restricted glycan and peptide epitopes

    Hewitson, J. P., Filbey, K. J., Grainger, J. R., Dowle, A. A., Pearson, M., Murray, J., Harcus, Y. & Maizels, R. M., 1 Nov 2011

    Article in Journal of Immunology

  102. Genotypes of predomestic horses match phenotypes painted in Paleolithic works of cave art

    Pruvost, M., Bellone, R., Benecke, N., Sandoval-Castellanos, E., Cieslak, M., Kuznetsova, T., Morales-Muniz, A., O'Connor, T., Reissmann, M., Hofreiter, M. & Ludwig, A., 15 Nov 2011

    Article in Proceedings of the National Academy of Sciences of the United States of America

  103. Species-specific responses of Late Quaternary megafauna to climate and humans

    Lorenzen, E. D., Nogues-Bravo, D., Orlando, L., Weinstock, J., Binladen, J., Marske, K. A., Ugan, A., Borregaard, M. K., Gilbert, M. T. P., Nielsen, R., Ho, S. Y. W., Goebel, T., Graf, K. E., Byers, D., Stenderup, J. T., Rasmussen, M., Campos, P. F., Leonard, J. A., Koepfli, K-P., Froese, D. & 35 others, Zazula, G., Stafford, T. W., Aaris-Sorensen, K., Batra, P., Haywood, A. M., Singarayer, J. S., Valdes, P. J., Boeskorov, G., Burns, J. A., Davydov, S. P., Haile, J., Jenkins, D. L., Kosintsev, P., Kuznetsova, T., Lai, X., Martin, L. D., McDonald, H. G., Mol, D., Meldgaard, M., Munch, K., Stephan, E., Sablin, M., Sommer, R. S., Sipko, T., Scott, E., Suchard, M. A., Tikhonov, A., Willerslev, R., Wayne, R. K., Cooper, A., Hofreiter, M., Sher, A., Shapiro, B., Rahbek, C. & Willerslev, E., 17 Nov 2011

    Article in Nature

  104. Early Appearance and Rapid, Selective Expansion of Lymphoid-Deficient Fetal HSCs Associated with Their Preferential Localization in the Marrow

    Benz, C., Copley, MR., Kent, DG., Wohrer, S. & Eaves, CJ., 18 Nov 2011, BLOOD. Vol. 118. p. 567-567 1 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  105. Inhibition of Let-7 Processing in Adult Murine Hematopoietic Stem Cells Induces a Fetal-Like High Self-Renewal Pattern in Their Progeny

    Copley, M. R., Kent, DG., Benz, C., Wohrer, S., Rowe, K. M., Day, C. W. & Eaves, CJ., 18 Nov 2011, BLOOD. Vol. 118. p. 23-23 1 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  106. Distance sampling and the challenge of monitoring butterfly populations

    Isaac, N. J. B., Cruickshanks, K. L., Weddle, A. M., Rowcliffe, J. M., Brereton, T. M., Dennis, R. L. H., Shuker, D. M. & Thomas, C. D., Dec 2011

    Article in Methods in ecology and evolution

  107. Expression of biomineralization-related ion transport genes in Emiliania huxleyi

    Mackinder, L., Wheeler, G., Schroeder, D., von Dassow, P., Riebesell, U. & Brownlee, C., Dec 2011

    Article in Environmental Microbiology

  108. The influence of temporal variation on relationships between ecosystem services

    Holland, R. A., Eigenbrod, F., Armsworth, P. R., Anderson, B. J., Thomas, C. D. & Gaston, K. J., Dec 2011

    Literature review in Biodiversity and Conservation

  109. Toward systems biology in brown algae to explore acclimation and adaptation to the shore environment

    Tonon, T., Eveillard, D., Prigent, S., Bourdon, J., Potin, P., Boyen, C. & Siegel, A., Dec 2011

    Review article in Omics : a journal of integrative biology