Search research publications and outputs

  1. 2012
  2. Loss of CDKL5 disrupts kinome profile and event-related potentials leading to autistic-like phenotypes in mice

    Wang, I-T. J., Allen, M., Goffin, D., Zhu, X., Fairless, A. H., Brodkin, E. S., Siegel, S. J., Marsh, E. D., Blendy, J. A. & Zhou, Z., 26 Dec 2012

    Article in Proceedings of the National Academy of Sciences of the United States of America

  3. Uncoupling of nucleotide hydrolysis and polymerization in the para protein superfamily disrupts DNA segregation dynamics

    Dobruk-Serkowska, A., Caccamo, M., Rodríguez-Castañeda, F., Wu, M., Bryce, K., Ng, I., Schumacher, M. A., Barillà, D. & Hayes, F., 14 Dec 2012

    Article in Journal of Biological Chemistry

  4. Functional Analysis of Leishmania Cyclopropane Fatty Acid Synthetase

    Oyola, S. O., Evans, K. J., Smith, T. K., Smith, B. A., Hilley, J. D., Mottram, J. C., Kaye, P. M. & Smith, D. F., 10 Dec 2012

    Article in PLoS ONE

  5. IL-7-producing stromal cells are critical for lymph node remodeling

    Onder, L., Narang, P., Scandella, E., Chai, Q., Iolyeva, M., Hoorweg, K., Halin, C., Richie, E., Kaye, P., Westermann, J., Cupedo, T., Coles, M. & Ludewig, B., 6 Dec 2012

    Article in Blood

  6. A Common Signaling Process that Promotes Mycorrhizal and Oomycete Colonization of Plants

    Wang, E., Schornack, S., Marsh, J. F., Gobbato, E., Schwessinger, B., Eastmond, P., Schultze, M., Kamoun, S. & Oldroyd, G. E. D., 4 Dec 2012

    Article in Current Biology

  7. A GRAS-Type Transcription Factor with a Specific Function in Mycorrhizal Signaling

    Gobbato, E., Marsh, J. F., Vernie, T., Wang, E., Maillet, F., Kim, J., Miller, J. B., Sun, J., Bano, S. A., Ratet, P., Mysore, K. S., Denarie, J., Schultze, M. & Oldroyd, G. E. D., 4 Dec 2012

    Article in Current Biology

  8. The discovery of new cyanobactins from cyanothece PCC 7425 defines a new signature for processing of patellamides

    Houssen, W. E., Koehnke, J., Zollman, D., Vendome, J., Raab, A., Smith, M. C. M., Naismith, J. H. & Jaspars, M., Dec 2012

    Article in Chembiochem

  9. CD8 T cells induce T-bet-dependent migration toward CXCR3 ligands by differentiated B cells produced during responses to alum-protein vaccines

    Serre, K., Cunningham, A. F., Coughlan, R. E., Lino, A. C., Rot, A., Hub, E., Moser, K., Manz, R., Ferraro, A., Bird, R., Toellner, K-M., Demengeot, J., MacLennan, I. C. M. & Mohr, E., 29 Nov 2012

    Article in Blood

  10. Spatial variation in food supply, mating behavior, and sexually transmitted disease epidemics

    Ryder, J. J., Pastok, D., Hoare, M-J., Bottery, M. J., Boots, M., Knell, R. K., Atkinson, D. & Hurst, G. D. D., 29 Nov 2012

    Article in Behavioral Ecology

  11. Gated rotation mechanism of site-specific recombination by ϕC31 integrase

    Olorunniji, F. J., Buck, D. E., Colloms, S. D., McEwan, A. R., Smith, M. C. M., Stark, W. M. & Rosser, S. J., 27 Nov 2012

    Article in Proceedings of the National Academy of Sciences of the United States of America

  12. Background-dependent effects of polyglutamine variation in the Arabidopsis thaliana gene ELF3

    Undurraga, S. F., Press, M. O., Legendre, M., Bujdoso, N., Bale, J., Wang, H., Davis, S. J., Verstrepen, K. J. & Queitsch, C., 20 Nov 2012

    Article in Proceedings of the National Academy of Sciences of the United States of America

  13. Structural basis of CBP/p300 recruitment in leukemia induction by E2A-PBX1

    Denis, C. M., Chitayat, S., Plevin, M. J., Wang, F., Thompson, P., Liu, S., Spencer, H. L., Ikura, M., LeBrun, D. P. & Smith, S. P., 8 Nov 2012

    Article in Blood

  14. Variant Ciz1 is a circulating biomarker for early-stage lung cancer

    Higgins, G., Roper, K. M., Watson, I. J., Blackhall, F. H., Rom, W. N., Pass, H. I., Ainscough, J. F. X. & Coverley, D., 6 Nov 2012

    Article in Proceedings of the National Academy of Sciences of the United States of America

  15. Seromuscular grafts for bladder reconstruction: extra-luminal demucosalisation of the bowel

    Subramaniam, R., Turner, A. M., Abbas, S. K., Thomas, D. F. M. & Southgate, J., Nov 2012

    Article in Urology

  16. Rhizobia with 16S rRNA and nifH similar to Mesorhizobium huakuii but Novel recA, glnII, nodA and nodC genes are symbionts of New Zealand Carmichaelinae

    Tan, H. W., Weir, B. S., Carter, N., Heenan, P. B., Ridgway, H. J., James, E. K., Sprent, J. I., Young, J. P. W. & Andrews, M., 31 Oct 2012

    Article in PLoS ONE

  17. In vivo architecture and action of bacterial structural maintenance of chromosome proteins

    Badrinarayanan, A., Reyes-Lamothe, R., Uphoff, S., Leake, M. C. & Sherratt, D. J., 26 Oct 2012

    Article in Science

  18. Systematic analysis of microRNA fingerprints in thrombocythemic platelets using integrated platforms

    Xu, X., Gnatenko, D. V., Ju, J., Hitchcock, I. S., Martin, D. W., Zhu, W. & Bahou, W. F., 25 Oct 2012

    Article in Blood

  19. The Ectocarpus Genome and Brown Algal Genomics. The Ectocarpus Genome Consortium.

    Cock, J. M., Sterck, L., Ahmed, S., Allen, A. E., Amoutzias, G., Anthouard, V., Artiguenave, F., Arun, A., Aury, J. M., Badger, J. H., Beszteri, B., Billiau, K., Bonnet, E., Bothwell, J. H., Bowler, C., Boyen, C., Brownlee, C., Carrano, C. J., Charrier, B., Cho, G. Y. & 64 others, Coelho, S. M., Collén, J., Le Corguillé, G., Corre, E., Dartevelle, L., Da Silva, C., Delage, L., Delaroque, N., Dittami, S. M., Doulbeau, S., Elias, M., Farnham, G., Gachon, C. M. M., Godfroy, O., Gschloessl, B., Heesch, S., Jabbari, K., Jubin, C., Kawai, H., Kimura, K., Kloareg, B., Küpper, F. C., Lang, D., Le Bail, A., Luthringer, R., Leblanc, C., Lerouge, P., Lohr, M., Lopez, P. J., Macaisne, N., Martens, C., Maumus, F., Michel, G., Miranda-Saavedra, D., Morales, J., Moreau, H., Motomura, T., Nagasato, C., Napoli, C. A., Nelson, D. R., Nyvall-Collén, P., Peters, A. F., Pommier, C., Potin, P., Poulain, J., Quesneville, H., Read, B., Rensing, S. A., Ritter, A., Rousvoal, S., Samanta, M., Samson, G., Schroeder, D. C., Scornet, D., Ségurens, B., Strittmatter, M., Tonon, T., Tregear, J. W., Valentin, K., Von Dassow, P., Yamagishi, T., Rouzé, P., Van de Peer, Y. & Wincker, P., 2 Oct 2012

    Article in Advances in Botanical Research

  20. Response to Cook et al. comment on " Fisheries Mismanagement"

    O'Leary, B. C., Smart, J. C. R., Neale, F. C., Hawkins, J. P., Newman, S., Milman, A. C., Roberts, C. M. & Datta, S., 1 Oct 2012

    Article in Marine pollution bulletin

  21. Aboveground-belowground herbivore interactions: a meta-analysis

    Johnson, S. N., Clark, K. E., Hartley, S. E., Jones, T. H., McKenzie, S. W. & Koricheva, J., Oct 2012

    Article in Ecology

  22. Conserved noncoding sequences highlight shared components of regulatory networks in dicotyledonous plants

    Baxter, L., Jironkin, A., Hickman, R., Moore, J., Barrington, C., Krusche, P., Dyer, N. P., Buchanan-Wollaston, V., Tiskin, A., Beynon, J., Denby, K. & Ott, S., Oct 2012

    Article in The Plant Cell

  23. Delayed induced silica defences in grasses and their potential for destabilising herbivore population dynamics

    Reynolds, J. J. H., Lambin, X., Massey, F. P., Reidinger, S., Sherratt, J. A., Smith, M. J., White, A. & Hartley, S. E., Oct 2012

    Article in Oecologia

  24. Retrograde vesicle transport in the Golgi

    Cottam, N. P. & Ungar, D., Oct 2012

    Book/Film/Article review in Protoplasma

  25. The genetic history of Europeans

    Pinhasi, R., Thomas, M. G., Hofreiter, M., Currat, M. & Burger, J., Oct 2012

    Article in Trends in Genetics

  26. Differential infection properties of three inducible prophages from an epidemic strain of Pseudomonas aeruginosa

    James, C., Fothergill, J., Kalwij, H., Hall, A., Cottell, J., Brockhurst, M. A. & Winstanley, C., 21 Sep 2012

    Article in Bmc microbiology

  27. Adaptive prolonged postreproductive life span in killer whales

    Foster, E. A., Franks, D. W., Mazzi, S., Darden, S. K., Balcomb, K. C., Ford, J. K. B. & Croft, D. P., 14 Sep 2012

    Article in Science

  28. Averting biodiversity collapse in tropical forest protected areas

    Laurance, W. F., Useche, D. C., Rendeiro, J., Kalka, M., Bradshaw, C. J. A., Sloan, S. P., Laurance, S. G., Campbell, M., Abernethy, K., Alvarez, P., Arroyo-Rodriguez, V., Ashton, P., Benitez-Malvido, J., Blom, A., Bobo, K. S., Cannon, C. H., Cao, M., Carroll, R., Chapman, C., Coates, R. & 196 others, Cords, M., Danielsen, F., De Dijn, B., Dinerstein, E., Donnelly, M. A., Edwards, D., Edwards, F., Farwig, N., Fashing, P., Forget, P-M., Foster, M., Gale, G., Harris, D., Harrison, R., Hart, J., Karpanty, S., Kress, W. J., Krishnaswamy, J., Logsdon, W., Lovett, J., Magnusson, W., Maisels, F., Marshall, A. R., McClearn, D., Mudappa, D., Nielsen, M. R., Pearson, R., Pitman, N., van der Ploeg, J., Plumptre, A., Poulsen, J., Quesada, M., Rainey, H., Robinson, D., Roetgers, C., Rovero, F., Scatena, F., Schulze, C., Sheil, D., Struhsaker, T., Terborgh, J., Thomas, D., Timm, R., Urbina-Cardona, J. N., Vasudevan, K., Wright, S. J., Arias-G, J. C., Arroyo, L., Ashton, M., Auzel, P., Babaasa, D., Babweteera, F., Baker, P., Banki, O., Bass, M., Bila-Isia, I., Blake, S., Brockelman, W., Brokaw, N., Bruehl, C. A., Bunyavejchewin, S., Chao, J-T., Chave, J., Chellam, R., Clark, C. J., Clavijo, J., Congdon, R., Corlett, R., Dattaraja, H. S., Dave, C., Davies, G., Beisiegel, B. D. M., da Silva, R. D. N., Di Fiore, A., Diesmos, A., Dirzo, R., Doran-Sheehy, D., Eaton, M., Emmons, L., Estrada, A., Ewango, C., Fedigan, L., Feer, F., Fruth, B., Willis, J. G., Goodale, U., Goodman, S., Guix, J. C., Guthiga, P., Haber, W., Hamer, K., Herbinger, I., Hill, J., Huang, Z., Sun, I. F., Ickes, K., Itoh, A., Ivanauskas, N., Jackes, B., Janovec, J., Janzen, D., Jiangming, M., Jin, C., Jones, T., Justiniano, H., Kalko, E., Kasangaki, A., Killeen, T., King, H., Klop, E., Knott, C., Kone, I., Kudavidanage, E., Ribeiro, J. L. D. S., Lattke, J., Laval, R., Lawton, R., Leal, M., Leighton, M., Lentino, M., Leonel, C., Lindsell, J., Ling-Ling, L., Linsenmair, K. E., Losos, E., Lugo, A., Lwanga, J., Mack, A. L., Martins, M., McGraw, W. S., McNab, R., Montag, L., Thompson, J. M., Nabe-Nielsen, J., Nakagawa, M., Nepal, S., Norconk, M., Novotny, V., O'Donnell, S., Opiang, M., Ouboter, P., Parker, K., Parthasarathy, N., Pisciotta, K., Prawiradilaga, D., Pringle, C., Rajathurai, S., Reichard, U., Reinartz, G., Renton, K., Reynolds, G., Reynolds, V., Riley, E., Roedel, M-O., Rothman, J., Round, P., Sakai, S., Sanaiotti, T., Savini, T., Schaab, G., Seidensticker, J., Siaka, A., Silman, M. R., Smith, T. B., de Almeida, S. S., Sodhi, N., Stanford, C., Stewart, K., Stokes, E., Stoner, K. E., Sukumar, R., Surbeck, M., Tobler, M., Tscharntke, T., Turkalo, A., Umapathy, G., van Weerd, M., Rivera, J. V., Venkataraman, M., Venn, L., Verea, C., de Castilho, C. V., Waltert, M., Wang, B., Watts, D., Weber, W., West, P., Whitacre, D., Whitney, K., Wilkie, D., Williams, S., Wright, D. D., Wright, P., Xiankai, L., Yonzon, P. & Zamzani, F., 12 Sep 2012

    Article in Nature

  29. Antibodies and IL-3 support helminth-induced basophil expansion

    Herbst, T., Esser, J., Prati, M., Kulagin, M., Stettler, R., Zaiss, M. M., Hewitson, J. P., Merky, P., Verbeek, J. S., Bourquin, C., Camberis, M., Prout, M., Maizels, R. M., Le Gros, G. & Harris, N. L., 11 Sep 2012

    Article in Proceedings of the National Academy of Sciences of the United States of America

  30. Burkholderia symbiotica sp. nov., isolated from root nodules of Mimosa spp. native to north-east Brazil

    Sheu, S-Y., Chou, J-H., Bontemps, C., Elliott, G. N., Gross, E., James, E. K., Sprent, J. I., Young, P. & Chen, W-M., Sep 2012

    Article in International Journal of Systematic and Evolutionary Microbiology

  31. A role for the root cap in root branching revealed by the non-auxin probe naxillin.

    De Rybel, B., Audenaert, D., Xuan, W., Overvoorde, P., Strader, L. C., Kepinski, S., Hoye, R., Brisbois, R., Parizot, B., Vanneste, S., Liu, X., Gilday, A., Graham, I. A., Nguyen, L., Jansen, L., Njo, M. F., Inze, D., Bartel, B. & Beeckman, T., Sep 2012

    Article in NATURE CHEMICAL BIOLOGY

  32. Arabidopsis defense against Botrytis cinerea: Chronology and regulation deciphered by high-resolution temporal transcriptomic analysis

    Windram, O., Madhou, P., Mchattie, S., Hill, C., Hickman, R., Cooke, E., Jenkins, D. J., Penfold, C. A., Baxter, L., Breeze, E., Kiddle, S. J., Rhodes, J., Atwell, S., Kliebenstein, D. J., Kim, Y. S., Stegle, O., Borgwardt, K., Zhang, C., Tabrett, A., Legaie, R. & 9 others, Moore, J., Finkenstadt, B., Wild, D. L., Mead, A., Rand, D., Beynon, J., Ott, S., Buchanan-Wollaston, V. & Denby, K. J., Sep 2012

    Article in The Plant Cell

  33. Immune modulation and modulators in Heligmosomoides polygyrus infection

    Maizels, R. M., Hewitson, J. P., Murray, J., Harcus, Y. M., Dayer, B., Filbey, K. J., Grainger, J. R., McSorley, H. J., Reynolds, L. A. & Smith, K. A., Sep 2012

    Article in Experimental parasitology

  34. MEDIATOR25 acts as an integrative hub for the regulation of jasmonate-responsive gene expression in Arabidopsis

    Çevik, V., Kidd, B. N., Zhang, P., Hill, C., Kiddle, S., Denby, K. J., Holub, E. B., Cahill, D. M., Manners, J. M., Schenk, P. M., Beynon, J. & Kazan, K., Sep 2012

    Article in Plant Physiology

  35. The zinc finger protein TcZFP2 binds target mRNAs enriched during Trypanosoma cruzi metacyclogenesis

    Moerking, P. A., Pontello Rampazzo, R. D. C., Walrad, P., Probst, C. M., Soares, M. J., Gradia, D. F., Pavoni, D. P., Krieger, M. A., Matthews, K., Goldenberg, S., Fragoso, S. P. & Dallagiovanna, B., Sep 2012

    Article in Memorias do Instituto Oswaldo Cruz

  36. Protected areas facilitate species' range expansions

    Thomas, C. D., Gillingham, P. K., Bradbury, R. B., Roy, D. B., Anderson, B. J., Baxter, J. M., Bourn, N. A. D., Crick, H. Q. P., Findon, R. A., Fox, R., Hodgson, J. A., Holt, A. R., Morecroft, M. D., O'Hanlon, N. J., Oliver, T. H., Pearce-Higgins, J. W., Procter, D. A., Thomas, J. A., Walker, K. J., Walmsley, C. A. & 2 others, Wilson, R. J. & Hill, J. K., 28 Aug 2012

    Article in Proceedings of the National Academy of Sciences of the United States of America

  37. Habitat associations of species show consistent but weak responses to climate

    Suggitt, A. J., Stefanescu, C., Paramo, F., Oliver, T., Anderson, B. J., Hill, J. K., Roy, D. B., Brereton, T. & Thomas, C. D., 23 Aug 2012

    Article in Biology letters

  38. Associative transcriptomics of traits in the polyploid crop species Brassica napus

    Harper, A. L., Trick, M., Higgins, J., Fraser, F., Clissold, L., Wells, R., Hattori, C., Bancroft, I. & Werner, P., 1 Aug 2012

    Article in Nature Biotechnology

  39. Arabidopsis Class I and Class II TCP Transcription Factors Regulate Jasmonic Acid Metabolism and Leaf Development Antagonistically

    Danisman, S., van der Wal, F., Dhondt, S., Waites, R., de Folter, S., Bimbo, A., van Dijk, A-J., Muino, J. M., Cutri, L., Dornelas, M. C., Angenent, G. C. & Immink, R. G. H., Aug 2012

    Article in Plant Physiology

  40. Arabidopsis GT34 family contains five xyloglucan α-1,6-xylosyltransferases.

    McQueen Mason, S. J., Vuttipongchaikij S, Broclehurst D, Steele-King C, Ashford DA, & Gomez LD, Aug 2012

    Article in New Phytologist

  41. Human Epithelial Basal Cells Are Cells of Origin of Prostate Cancer, Independent of CD133 Status (vol 30, pg 1087, 2012)

    Taylor, R. A., Toivanen, R., Frydenberg, M., Pedersen, J., Harewood, L., Collins, A. T., Maitland, N. J., Risbridger, G. P. & Australian Prostate, Aug 2012

    Article in Stem Cells

  42. Modelling dispersal: An eco-evolutionary framework incorporating emigration, movement, settlement behaviour and the multiple costs involved

    Travis, J. M. J., Mustin, K., Bartoń, K. A., Benton, T. G., Clobert, J., Delgado, M. M., Dytham, C., Hovestadt, T., Palmer, S. C. F., Van Dyck, H. & Bonte, D., Aug 2012

    Article in Methods in ecology and evolution

  43. New Life for Ancient DNA

    Campbell, K. L. & Hofreiter, M., Aug 2012

    Article in Scientific american

  44. The mechanism of patellamide macrocyclization revealed by the characterization of the PatG macrocyclase domain

    Koehnke, J., Bent, A., Houssen, W. E., Zollman, D., Morawitz, F., Shirran, S., Vendome, J., Nneoyiegbe, A. F., Trembleau, L., Botting, C. H., Smith, M. C. M., Jaspars, M. & Naismith, J. H., Aug 2012

    Article in Nature Structural & Molecular Biology

  45. Towards deciphering dynamic changes and evolutionary mechanisms involved in the adaptation to low salinities in Ectocarpus (brown algae)

    Dittami, S. M., Gravot, A., Goulitquer, S., Rousvoal, S., Peters, A. F., Bouchereau, A., Boyen, C. & Tonon, T., Aug 2012

    Article in The Plant journal

  46. Differential RET Signaling Pathways Drive Development of the Enteric Lymphoid and Nervous Systems

    Patel, A., Harker, N., Moreira-Santos, L., Alden, K. J., Timmis, J., Foster, K., Andrews, PAUL. S., Pachnis, P., Garefalaki, A., Coles, M. C., Enomoto, H., Milbrandt, J., Pachnis, V., Kioussis, D. & Veiga-Fernandes, H., 31 Jul 2012

    Article in Science Signaling

  47. The biochemistry and biology of the atypical chemokine receptors

    Graham, G. J., Locati, M., Mantovani, A., Rot, A. & Thelen, M., 30 Jul 2012

    Article in Immunology letters

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