Search research publications and outputs

  1. Burkholderia symbiotica sp. nov., isolated from root nodules of Mimosa spp. native to north-east Brazil

    Sheu, S-Y., Chou, J-H., Bontemps, C., Elliott, G. N., Gross, E., James, E. K., Sprent, J. I., Young, P. & Chen, W-M., Sep 2012

    Article in International Journal of Systematic and Evolutionary Microbiology

  2. A Collaboratively-Derived Science-Policy Research Agenda

    Sutherland, W. J., Bellingan, L., Bellingham, J. R., Blackstock, J. J., Bloomfield, R. M., Bravo, M., Cadman, V. M., Cleevely, D. D., Clements, A., Cohen, A. S., Cope, D. R., Daemmrich, A. A., Devecchi, C., Anadon, L. D., Denegri, S., Doubleday, R., Dusic, N. R., Evans, R. J., Feng, W. Y., Godfray, H. C. J. & 32 others, Harris, P., Hartley, S. E., Hester, A. J., Holmes, J., Hughes, A., Hulme, M., Irwin, C., Jennings, R. C., Kass, G. S., Littlejohns, P., Marteau, T. M., McKee, G., Millstone, E. P., Nuttall, W. J., Owens, S., Parker, M. M., Pearson, S., Petts, J., Ploszek, R., Pullin, A. S., Reid, G., Richards, K. S., Robinson, J. G., Shaxson, L., Sierra, L., Smith, B. G., Spiegelhalter, D. J., Stilgoe, J., Stirling, A., Tyler, C. P., Winickoff, D. E. & Zimmern, R. L., 9 Mar 2012

    Article in PLoS ONE

  3. A Common Signaling Process that Promotes Mycorrhizal and Oomycete Colonization of Plants

    Wang, E., Schornack, S., Marsh, J. F., Gobbato, E., Schwessinger, B., Eastmond, P., Schultze, M., Kamoun, S. & Oldroyd, G. E. D., 4 Dec 2012

    Article in Current Biology

  4. A GRAS-Type Transcription Factor with a Specific Function in Mycorrhizal Signaling

    Gobbato, E., Marsh, J. F., Vernie, T., Wang, E., Maillet, F., Kim, J., Miller, J. B., Sun, J., Bano, S. A., Ratet, P., Mysore, K. S., Denarie, J., Schultze, M. & Oldroyd, G. E. D., 4 Dec 2012

    Article in Current Biology

  5. A role for the root cap in root branching revealed by the non-auxin probe naxillin.

    De Rybel, B., Audenaert, D., Xuan, W., Overvoorde, P., Strader, L. C., Kepinski, S., Hoye, R., Brisbois, R., Parizot, B., Vanneste, S., Liu, X., Gilday, A., Graham, I. A., Nguyen, L., Jansen, L., Njo, M. F., Inze, D., Bartel, B. & Beeckman, T., Sep 2012

    Article in NATURE CHEMICAL BIOLOGY

  6. A transductionally retargeted adenoviral vector for virotherapy of Her2/neu-expressing prostate cancer

    Magnusson, M. K., Kraaij, R., Leadley, R. M., De Ridder, C. M. A., van Weerden, W. M., Van Schie, K. A. J., Van der Kroeg, M., Hoeben, R. C., Maitland, N. J. & Lindholm, L., 1 Jan 2012

    Article in HUMAN GENE THERAPY

  7. ATSWI3C subunit of the Arabidopsis SWI/SNF chromatin remodeling complex is involved in the GA response pathway

    Rolicka, A., Bucior, E., Sarnowska, E., Gratkowska, D., Archacki, R., Davis, S. J., Koncz, C., Sarnowski, TJ. & Jerzmanowski, A., 2012

    Article in FEBS Journal

  8. Aboveground-belowground herbivore interactions: a meta-analysis

    Johnson, S. N., Clark, K. E., Hartley, S. E., Jones, T. H., McKenzie, S. W. & Koricheva, J., Oct 2012

    Article in Ecology

  9. Adaptive prolonged postreproductive life span in killer whales

    Foster, E. A., Franks, D. W., Mazzi, S., Darden, S. K., Balcomb, K. C., Ford, J. K. B. & Croft, D. P., 14 Sep 2012

    Article in Science

  10. Adenovirus E4orf3 targets transcriptional intermediary factor 1γ for proteasome-dependent degradation during infection

    Forrester, N. A., Patel, R. N., Speiseder, T., Groitl, P., Sedgwick, G. G., Shimwell, N. J., Seed, R. I., Catnaigh, P. Ó., McCabe, C. J., Stewart, G. S., Dobner, T., Grand, R. J. A., Martin, A. & Turnell, A. S., Mar 2012

    Article in JOURNAL OF VIROLOGY

  11. Ancient DNA extracted from Danish aurochs (Bos primigenius): genetic diversity and preservation

    Gravlund, P., Aaris-Sørensen, K., Noe-Nygaard, N., Bollback, J. P., Hofreiter, M. & Meyer, M., 20 Jan 2012

    Article in Annals of anatomy-Anatomischer anzeiger

  12. Antibodies and IL-3 support helminth-induced basophil expansion

    Herbst, T., Esser, J., Prati, M., Kulagin, M., Stettler, R., Zaiss, M. M., Hewitson, J. P., Merky, P., Verbeek, J. S., Bourquin, C., Camberis, M., Prout, M., Maizels, R. M., Le Gros, G. & Harris, N. L., 11 Sep 2012

    Article in Proceedings of the National Academy of Sciences of the United States of America

  13. Arabidopsis Class I and Class II TCP Transcription Factors Regulate Jasmonic Acid Metabolism and Leaf Development Antagonistically

    Danisman, S., van der Wal, F., Dhondt, S., Waites, R., de Folter, S., Bimbo, A., van Dijk, A-J., Muino, J. M., Cutri, L., Dornelas, M. C., Angenent, G. C. & Immink, R. G. H., Aug 2012

    Article in Plant Physiology

  14. Arabidopsis GT34 family contains five xyloglucan α-1,6-xylosyltransferases.

    McQueen Mason, S. J., Vuttipongchaikij S, Broclehurst D, Steele-King C, Ashford DA, & Gomez LD, Aug 2012

    Article in New Phytologist

  15. Arabidopsis defense against Botrytis cinerea: Chronology and regulation deciphered by high-resolution temporal transcriptomic analysis

    Windram, O., Madhou, P., Mchattie, S., Hill, C., Hickman, R., Cooke, E., Jenkins, D. J., Penfold, C. A., Baxter, L., Breeze, E., Kiddle, S. J., Rhodes, J., Atwell, S., Kliebenstein, D. J., Kim, Y. S., Stegle, O., Borgwardt, K., Zhang, C., Tabrett, A., Legaie, R. & 9 others, Moore, J., Finkenstadt, B., Wild, D. L., Mead, A., Rand, D., Beynon, J., Ott, S., Buchanan-Wollaston, V. & Denby, K. J., Sep 2012

    Article in The Plant Cell

  16. Associative transcriptomics of traits in the polyploid crop species Brassica napus

    Harper, A. L., Trick, M., Higgins, J., Fraser, F., Clissold, L., Wells, R., Hattori, C., Bancroft, I. & Werner, P., 1 Aug 2012

    Article in Nature Biotechnology

  17. Atmospheric scanning electron microscope for correlative microscopy

    Morrison, I. E. G., Dennison, C. L., Nishiyama, H., Suga, M., Sato, C., Yarwood, A. & O'Toole, P. J., 2012

    Article in Methods in cell biology

  18. Background-dependent effects of polyglutamine variation in the Arabidopsis thaliana gene ELF3

    Undurraga, S. F., Press, M. O., Legendre, M., Bujdoso, N., Bale, J., Wang, H., Davis, S. J., Verstrepen, K. J. & Queitsch, C., 20 Nov 2012

    Article in Proceedings of the National Academy of Sciences of the United States of America

  19. Biochemical and functional analysis of two Plasmodium falciparum blood-stage 6-cys proteins: P12 and P41. Plos One

    Taechalertpaisarn, T., Crosnier, C., Bartholdson, S. J., Hodder, A. N., Thompson, J., Bustamante, L. Y., Wilson, D. W., Sanders, P. R., Wright, G. J., Rayner, J. C., Cowman, A. F., Gilson, P. R. & Crabb, B. S., 2012

    Article in PLOS one

  20. Biotic carbon feedbacks in a materially closed soil–vegetation–atmosphere system

    Milcu, A., Lukac, M., Subke, J-A., Manning, P., Heinemeyer, A., Wildmann, D., Anderson, R. & Ineson, P., Apr 2012

    Article in Nature Climate Change

  21. Branchpoint Expansion in a Fully Complementary Three-Way DNA Junction

    Sabir, T., Toulmin, A., Ma, L., Jones, A. C., McGlynn, P., Schroeder, G. F. & Magennis, S. W., 11 Apr 2012

    Article in Journal of the American Chemical Society

  22. Butterfly genome reveals promiscuous exchange of mimicry adaptations among species

    Dasmahapatra, K. K., Walters, J. R., Briscoe, A. D., Davey, J. W., Whibley, A., Nadeau, N. J., Zimin, A. V., Hughes, D. S. T., Ferguson, L. C., Martin, S. H., Salazar, C., Lewis, J. J., Adler, S., Ahn, S-J., Baker, D. A., Baxter, S. W., Chamberlain, N. L., Chauhan, R., Counterman, B. A., Dalmay, T. & 31 others, Gilbert, L. E., Gordon, K., Heckel, D. G., Hines, H. M., Hoff, K. J., Holland, P. W. H., Jacquin-Joly, E., Jiggins, F. M., Jones, R. T., Kapan, D. D., Kersey, P., Lamas, G., Lawson, D., Mapleson, D., Maroja, L. S., Martin, A., Moxon, S., Palmer, W. J., Papa, R., Papanicolaou, A., Pauchet, Y., Ray, D. A., Rosser, N., Salzberg, S. L., Supple, M. A., Surridge, A., Tenger-Trolander, A., Vogel, H., Wilkinson, P. A., Wilson, D. & Heliconius Genome Consortium, 5 Jul 2012

    Article in Nature

  23. CD8 T cells induce T-bet-dependent migration toward CXCR3 ligands by differentiated B cells produced during responses to alum-protein vaccines

    Serre, K., Cunningham, A. F., Coughlan, R. E., Lino, A. C., Rot, A., Hub, E., Moser, K., Manz, R., Ferraro, A., Bird, R., Toellner, K-M., Demengeot, J., MacLennan, I. C. M. & Mohr, E., 29 Nov 2012

    Article in Blood

  24. Cargo ubiquitination is essential for multivesicular body intralumenal vesicle formation

    MacDonald, C., Buchkovich, N. J., Stringer, D. K., Emr, S. D. & Piper, R. C., Apr 2012

    Article in EMBO Reports

  25. Chromosome segregation in Archaea mediated by a hybrid DNA partition machine

    Kalliomaa-Sanford, A. K., Rodriguez-Castañeda, F. A., McLeod, B. N., Latorre-Roselló, V., Smith, J. H., Reimann, J., Albers, S. V. & Barilla, D., 6 Mar 2012

    Article in Proceedings of the National Academy of Sciences of the United States of America

  26. Clovis Age Western Stemmed Projectile Points and Human Coprolites at the Paisley Caves

    Jenkins, D. L., Davis, L. G., Stafford, T. W., Campos, P. F., Hockett, B., Jones, G. T., Cummings, L. S., Yost, C., Connolly, T. J., Yohe, R. M., Gibbons, S. C., Raghavan, M., Rasmussen, M., Paijmans, J. L. A., Hofreiter, M., Kemp, B. M., Barta, J. L., Monroe, C., Gilbert, M. T. P. & Willerslev, E., 13 Jul 2012

    Article in Science

  27. Comparative genomics of Shiga toxin encoding bacteriophages

    Smith, D. L., Rooks, D. J., Fogg, P. C. M., Darby, A. C., Thomson, N. R., McCarthy, A. J. & Allison, H. E., 2012

    Article in BMC Genomics

  28. Conformational properties of the unfolded state of Im7 in nondenaturing conditions

    Pashley, C. L., Morgan, G. J., Kalverda, A. P., Thompson, G. S., Kleanthous, C. & Radford, S. E., 17 Feb 2012

    Article in Journal of Molecular Biology

  29. Conserved noncoding sequences highlight shared components of regulatory networks in dicotyledonous plants

    Baxter, L., Jironkin, A., Hickman, R., Moore, J., Barrington, C., Krusche, P., Dyer, N. P., Buchanan-Wollaston, V., Tiskin, A., Beynon, J., Denby, K. & Ott, S., Oct 2012

    Article in The Plant Cell

  30. Delayed induced silica defences in grasses and their potential for destabilising herbivore population dynamics

    Reynolds, J. J. H., Lambin, X., Massey, F. P., Reidinger, S., Sherratt, J. A., Smith, M. J., White, A. & Hartley, S. E., Oct 2012

    Article in Oecologia

  31. Deregulation of Rab and Rab Effector Genes in Bladder Cancer

    Ho, J. R., Chapeaublanc, E., Kirkwood, L., Nicolle, R., Benhamou, S., Lebret, T., Allory, Y., Southgate, J., Radvanyi, F. & Goud, B., 19 Jun 2012

    Article in PLoS ONE

  32. Differential RET Signaling Pathways Drive Development of the Enteric Lymphoid and Nervous Systems

    Patel, A., Harker, N., Moreira-Santos, L., Alden, K. J., Timmis, J., Foster, K., Andrews, PAUL. S., Pachnis, P., Garefalaki, A., Coles, M. C., Enomoto, H., Milbrandt, J., Pachnis, V., Kioussis, D. & Veiga-Fernandes, H., 31 Jul 2012

    Article in Science Signaling

  33. Differential infection properties of three inducible prophages from an epidemic strain of Pseudomonas aeruginosa

    James, C., Fothergill, J., Kalwij, H., Hall, A., Cottell, J., Brockhurst, M. A. & Winstanley, C., 21 Sep 2012

    Article in Bmc microbiology

  34. Direct Regulation of tRNA and 5S rRNA Gene Transcription by Polo-like Kinase 1

    Fairley, J. A., Mitchell, L. E., Berg, T., Kenneth, N. S., von Schubert, C., Nigg, E. A., Silljé, H. H. W., Medema, R. H. & White, R. J., 24 Feb 2012

    Article in Molecular Cell

  35. Distinguishing Social from Nonsocial Navigation in Moving Animal Groups

    Bode, N. W. F., Franks, D. W., Wood, A. J., Piercy, J. J. B., Croft, D. P. & Codling, E. A., May 2012

    Article in AMERICAN NATURALIST

  36. Do ants need to be old and experienced to teach?

    Franklin, E. L., Robinson, E. J. H., Marshall, J. A. R., Sendova-Franks, A. B. & Franks, N. R., Apr 2012

    Article in The Journal of Experimental Biology

  37. EARLY FLOWERING4 recruitment of EARLY FLOWERING3 in the nucleus sustains the Arabidopsis circadian clock

    Herrero, E., Kolmos, E., Bujdoso, N., Yuan, Y., Wang, M., Berns, M. C., Uhlworm, H., Coupland, G., Saini, R., Jaskolski, M., Webb, A. & Davis, S. J., Feb 2012

    Article in The Plant Cell

  38. Effects of cultivar and egg density on a colonizing vine weevil (Otiorhynchus sulcatus) population and its impacts on red raspberry growth and yield

    Clark, K. E., Hartley, S. E., Brennan, R. M., Jennings, S. N., McMenemy, L. S., McNicol, J. W., Mitchell, C. & Johnson, S. N., Feb 2012

    Article in Crop protection

  39. Enhancing blockade of Plasmodium falciparum erythrocyte invasion: assessing combinations of antibodies against PfRH5 and other merozoite antigens. PLoS Pathogens

    Williams, A. R., Douglas, A. D., Miura, K., Illingworth, J. J., Choudhary, P., Murungi, L. M., Furze, J. M., Diouf, A., Miotto, O., Crosnier, C., Wright, G. J., Kwiatkowski, D. P., Fairhurst, R. M., Long, C. A. & Draper, S. J., 2012

    Article in PLoS Pathog

  40. Factors limiting the synthesis of virgin olive oil volatile esters

    Sanchez-Ortiz, A., Romero-Segura, C., Gazda, V., Graham, I. A., Sanz, C. & Perez, AG., 8 Feb 2012

    Article in Journal of Agricultural and Food Chemistry

  41. Functional Analysis of Leishmania Cyclopropane Fatty Acid Synthetase

    Oyola, S. O., Evans, K. J., Smith, T. K., Smith, B. A., Hilley, J. D., Mottram, J. C., Kaye, P. M. & Smith, D. F., 10 Dec 2012

    Article in PLoS ONE

  42. Gated rotation mechanism of site-specific recombination by ϕC31 integrase

    Olorunniji, F. J., Buck, D. E., Colloms, S. D., McEwan, A. R., Smith, M. C. M., Stark, W. M. & Rosser, S. J., 27 Nov 2012

    Article in Proceedings of the National Academy of Sciences of the United States of America

  43. GeneDB-an annotation database for pathogens

    Logan-Klumpler, F. J., De Silva, N., Boehme, U., Rogers, M. B., Velarde, G., McQuillan, J. A., Carver, T., Aslett, M., Olsen, C., Subramanian, S., Phan, I., Farris, C., Mitra, S., Ramasamy, G., Wang, H., Tivey, A., Jackson, A., Houston, R., Parkhill, J., Holden, M. & 8 others, Harb, O. S., Brunk, B. P., Myler, P. J., Roos, D., Carrington, M., Smith, D. F., Hertz-Fowler, C. & Berriman, M., Jan 2012

    Article in Nucleic Acids Research

  44. Genetic analysis of cave bear specimens from Niedźwiedzia cave, sudetes, Poland

    Baca, M., Stankovic, A., Stefaniak, K., Marciszak, A., Hofreiter, M., Nadachowski, A., Wegleński, P. & Mackiewicz, P., 1 Jan 2012

    Article in Palaeontologia Electronica

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