Search research publications and outputs

  1. 2014
  2. The DET1-COP1-HY5 Pathway Constitutes a Multipurpose Signaling Module Regulating Plant Photomorphogenesis and Thermomorphogenesis

    Delker, C., Sonntag, L., Velikkakam James, G., Janitza, P., Ibañez, C., Ziermann, H., Peterson, T., Denk, K., Mull, S., Ziegler, J., Davis, S. J., Schneeberger, K. & Quint, M., 24 Dec 2014

    Article in Cell reports

  3. Class IIa histone deacetylases are conserved regulators of circadian function

    Fogg, P. C. M., O'Neill, J. S., Dobrzycki, T., Calvert, S., Lord, E. C., McIntosh, R. L. L., Elliott, C. J. H., Sweeney, S. T., Hastings, M. H. & Chawla, S., 5 Dec 2014

    Article in The Journal of biological chemistry

  4. Protocols for the Isolation and Analysis of Lipopeptides and Bioemulsifiers

    Smyth, T. J., Rudden, M. M., Tsaousi, K., Marchant, R. & Banat, I. M., 4 Dec 2014, Protocols for the Isolation and Analysis of Lipopeptides and Bioemulsifiers. p. 3-28 26 p.

    Research output: Chapter in Book/Report/Conference proceedingChapter

  5. Lytic activity by temperate phages of Pseudomonas aeruginosa in long-term cystic fibrosis chronic lung infections

    James, C. E., Davies, E. V., Fothergill, J. L., Walshaw, M. J., Beale, C. M., Brockhurst, M. A. & Winstanley, C., 2 Dec 2014

    Article in The ISME Journal

  6. Novel mutations in human and mouse SCN4A implicate AMPK in myotonia and periodic paralysis

    Corrochano, S., Männikkö, R., Joyce, P. I., McGoldrick, P., Wettstein, J., Lassi, G., Rayan, D. L. R., Blanco, G., Quinn, C., Liavas, A., Lionikas, A., Amior, N., Dick, J., Healy, E. G., Stewart, M., Carter, S., Hutchinson, M., Bentley, L., Fratta, P., Cortese, A. & 9 others, Cox, R., Brown, S. D. M., Tucci, V., Wackerhage, H., Amato, A. A., Greensmith, L., Koltzenburg, M., Hanna, M. G. & Acevedo-Arozena, A., 1 Dec 2014

    Article in Brain

  7. A zoospore inoculation method with Phytophthora Sojae to assess the prophylactic role of silicon on soybean cultivars

    Guérin, V., Lebreton, A., Cogliati, E. E., Hartley, S. E., Belzile, F., Menzies, J. G. & Bélanger, R. R., Dec 2014

    Article in Plant Disease

  8. Altered expression of an RBP-associated arginine methyltransferase 7 in Leishmania major affects parasite infection

    Ferreira, T. R., Ferreira, E. V. C. A., Defina, T. P. A., Walrad, P. B., Papadopoulou, B. & Cruz, A. K., Dec 2014

    Article in Molecular Microbiology

  9. Hybridization facilitates evolutionary rescue

    Stelkens, R. B., Brockhurst, M. A., Hurst, G. D. D. & Greig, D., Dec 2014

    Article in Evolutionary applications

  10. Localisation and interactions of the Vipp1 protein in cyanobacteria

    Bryan, S. J., Burroughs, N. J., Shevela, D., Yu, J., Rupprecht, E., Liu, L-N., Mastroianni, G., Xue, Q., Llorente-Garcia, I., Leake, M. C., Eichacker, L. A., Schneider, D., Nixon, P. J. & Mullineaux, C. W., Dec 2014

    Article in Molecular Microbiology

  11. Side by Side Comparison of Chemical Compounds Generated by Aqueous Pretreatments of Maize Stover, Miscanthus and Sugarcane Bagasse

    Gómez, L. D., Vanholme, R., Bird, S., Goeminne, G., Trindade, L. M., Polikarpov, I., Simister, R., Morreel, K., Boerjan, W. & McQueen Mason, S. J., Dec 2014

    Article in BioEnergy Research

  12. Independent Component Analysis Uncovers the Landscape of the Bladder Tumor Transcriptome and Reveals Insights into Luminal and Basal Subtypes

    Biton, A., Bernard-Pierrot, I., Lou, Y., Krucker, C., Chapeaublanc, E., Rubio-Pérez, C., López-Bigas, N., Kamoun, A., Neuzillet, Y., Gestraud, P., Grieco, L., Rebouissou, S., deReyniès, A., Benhamou, S., Lebret, T., Southgate, J., Barillot, E., Allory, Y., Zinovyev, A. & Radvanyi, F., 20 Nov 2014

    Article in Cell reports

  13. Nongenetic stochastic expansion of JAK2V617F-homozygous subclones in polycythemia vera?

    Godfrey, A. L., Nangalia, J., Baxter, E. J., Massie, CE., Kent, DG., Papaemmanuil, E., Campbell, P. J. & Green, AR., 20 Nov 2014

    Article in Blood

  14. Malaria mosquitoes host-locate and feed upon caterpillars

    George, J., Blanford, S., Thomas, M. B. & Baker, T. C., 5 Nov 2014

    Article in PLoS ONE

  15. Subcellular Fractionation: a laboratory manual

    Pryor, P. (ed.), 1 Nov 2014, Cold Spring Harbour Laboratory Press. 247 p. (Laboratory Manual)

    Research output: Book/ReportBook

  16. High-resolution mapping of transcriptional dynamics across tissue development reveals a stable mRNA-tRNA interface

    Schmitt, B. M., Rudolph, K. L. M., Karagianni, P., Fonseca, N. A., White, R. J., Talianidis, I., Odom, D. T., Marioni, J. C. & Kutter, C., Nov 2014

    Article in Genome Research

  17. The evolution and genetics of virus host shifts

    Longdon, B., Brockhurst, M. A., Russell, C. A., Welch, J. J. & Jiggins, F. M., Nov 2014

    Article in PLOS PATHOGENS

  18. An Efficient Method for the In Vitro Production of Azol(in)e-Based Cyclic Peptides

    Houssen, W. E., Bent, A. F., McEwan, A. R., Pieiller, N., Tabudravu, J., Koehnke, J., Mann, G., Adaba, R. I., Thomas, L., Hawas, U. W., Liu, H., Schwarz-Linek, U., Smith, M. C. M., Naismith, J. H. & Jaspars, M., 21 Oct 2014

    Article in Angewandte Chemie International Edition

  19. Increased resistance to biotrophic pathogens in the arabidopsis constitutive induced resistance 1 mutant is EDS1 and PAD4-dependent and modulated by environmental temperature

    Carstens, M., McCrindle, T. K., Adams, N., Diener, A., Guzha, D. T., Murray, S. L., Parker, J. E., Denby, K. J. & Ingle, R. A., 10 Oct 2014

    Article in PLoS ONE

  20. Recent advances in ancient DNA research and their implications for archaeobotany

    Brown, T. A., Cappellini, E., Kistler, L., Lister, D. L., Oliveira, H. R., Wales, N. & Schlumbaum, A., 7 Oct 2014

    Review article in Vegetation History and Archaeobotany

  21. Studies of the regulated assembly of SNARE complexes in adipocytes

    Kioumourtzoglou, D., Sadler, J. B. A., Black, H. L., Berends, R., Wellburn, C., Bryant, N. J. & Gould, G. W., 1 Oct 2014

    Article in Biochemical Society transactions

  22. Burkholderia sp. Induces Functional Nodules on the South African Invasive Legume Dipogon lignosus (Phaseoleae) in New Zealand Soils

    Liu, W. Y. Y., Ridgway, H. J., James, T. K., James, E. K., Chen, W-M., Sprent, J. I., Young, P. W. & Andrews, M., Oct 2014

    Article in Microbial Ecology

  23. The genome-scale metabolic network of Ectocarpus siliculosus (EctoGEM): a resource to study brown algal physiology and beyond

    Prigent, S., Collet, G., Dittami, S. M., Delage, L., Ethis de Corny, F., Dameron, O., Eveillard, D., Thiele, S., Cambefort, J., Boyen, C., Siegel, A. & Tonon, T., Oct 2014

    Article in The Plant journal

  24. Global profiling of co- and post-translationally N-myristoylated proteomes in human cells

    Thinon, E., Serwa, R. A., Broncel, M., Brannigan, J. A., Brassat, U., Wright, M. H., Heal, W. P., Wilkinson, A. J., Mann, D. J. & Tate, E. W., 26 Sep 2014

    Article in Nature Communications

  25. Silicon, endophytes and secondary metabolites as grass defenses against mammalian herbivores

    Huitu, O., Forbes, K. M., Helander, M., Julkunen-Tiitto, R., Lambin, X., Saikkonen, K., Stuart, P., Sulkama, S. & Hartley, S., 17 Sep 2014

    Article in Frontiers in Plant Science

  26. MyD88 signaling inhibits protective immunity to the gastrointestinal helminth parasite Heligmosomoides polygyrus

    Reynolds, L. A., Harcus, Y., Smith, K. A., Webb, L. M., Hewitson, J. P., Ross, E. A., Brown, S., Uematsu, S., Akira, S., Gray, D., Gray, M., MacDonald, A. S., Cunningham, A. F. & Maizels, R. M., 15 Sep 2014

    Article in Journal of Immunology

  27. Actin Is Required for IFT Regulation in Chlamydomonas reinhardtii

    Avasthi, P., Onishi, M., Karpiak, J., Yamamoto, R., Mackinder, L., Jonikas, MC., Sale, WS., Shoichet, B., Pringle, JR. & Marshall, WF., 8 Sep 2014

    Article in Current Biology

  28. Abnormal visual gain control in a Parkinson's disease model

    Afsari, F., Christensen, K., Smith, G., Hentzer, M., Nippe, O., Elliott, C. & Wade, A., 1 Sep 2014

    Article in Human Molecular Genetics

  29. Mapping-by-Sequencing Identifies HvPHYTOCHROME C as a Candidate Gene for the early maturity 5 Locus Modulating the Circadian Clock and Photoperiodic Flowering in Barley

    Pankin, A., Campoli, C., Dong, X., Kilian, B., Sharma, R., Himmelbach, A., Saini, R., Davis, S. J., Stein, N., Schneeberger, K. & von Korff, M., 1 Sep 2014

    Article in Human Genetics

  30. Early allopolyploid evolution in the post-neolithic Brassica napus oilseed genome

    Chalhoub, B., Denoeud, F., Liu, S., Parkin, I. A. P., Tang, H., Wang, X., Chiquet, J., Belcram, H., Tong, C., Samans, B., Corréa, M., Da Silva, C., Just, J., Falentin, C., Koh, C. S., Le Clainche, I., Bernard, M., Bento, P., Noel, B., Labadie, K. & 62 others, Alberti, A., Charles, M., Arnaud, D., Guo, H., Daviaud, C., Alamery, S., Jabbari, K., Zhao, M., Edger, P. P., Chelaifa, H., Tack, D., Lassalle, G., Mestiri, I., Schnel, N., Le Paslier, M. C., Fan, G., Renault, V., Bayer, P. E., Golicz, A. A., Manoli, S., Lee, T. H., Thi, V. H. D., Chalabi, S., Hu, Q., Fan, C., Tollenaere, R., Lu, Y., Battail, C., Shen, J., Sidebottom, C. H. D., Wang, X., Canaguier, A., Chauveau, A., Bérard, A., Deniot, G., Guan, M., Liu, Z., Sun, F., Lim, Y. P., Lyons, E., Town, C. D., Bancroft, I., Wang, X., Meng, J., Ma, J., Pires, J. C., King, G. J., Brunel, D., Delourme, R., Renard, M., Aury, J. M., Adams, K. L., Batley, J., Snowdon, R. J., Tost, J., Edwards, D., Zhou, Y., Hua, W., Sharpe, A. G., Paterson, A. H., Guan, C. & Wincker, P., 22 Aug 2014

    Article in Science

  31. Insulin protects pancreatic acinar cells from palmitoleic acid-induced cellular injury

    Samad, A., James, A., Wong, J., Mankad, P., Whitehouse, J., Patel, W., Alves-Simoes, M., Siriwardena, A. K. & Bruce, J. I. E., 22 Aug 2014

    Article in The Journal of biological chemistry

  32. Genome-wide investigation of genetic changes during modern breeding of Brassica napus

    Wang, N., Li, F., Chen, B., Xu, K., Yan, G., Qiao, J., Li, J., Gao, G., Bancroft, I., Meng, J., King, G. J. & Wu, X., 20 Aug 2014

    Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik

  33. Genome-Wide Association Study Dissects the Genetic Architecture of Seed Weight and Seed Quality in Rapeseed (Brassica napus L.)

    Li, F., Chen, B., Xu, K., Wu, J., Song, W., Bancroft, I., Harper, A. L., Trick, M., Liu, S., Gao, G., Wang, N., Yan, G., Qiao, J., Li, J., Li, H., Xiao, X., Zhang, T. & Wu, X., 1 Aug 2014

    Article in DNA Research

  34. Correlative and integrated light and electron microscopy of in-resin GFP fluorescence, used to localise diacylglycerol in mammalian cells

    Peddie, C. J., Blight, K., Wilson, E., Melia, C., Marrison, J., Carzaniga, R., Domart, M-C., O'Toole, P., Larijani, B. & Collinson, L. M., Aug 2014

    Article in Ultramicroscopy

  35. New antigens for a multicomponent blood-stage malaria vaccine

    Osier, F. H., Mackinnon, M. J., Crosnier, C., Fegan, G., Kamuyu, G., Wanaguru, M., Ogada, E., McDade, B., Rayner, J. C., Wright, G. J. & Marsh, K., 30 Jul 2014

    Article in Science Translational Medicine

  36. New Applications for Phage Integrases

    Fogg, P. C. M., Colloms, S., Rosser, S., Stark, M. & Smith, M. C. M., 29 Jul 2014

    Article in Journal of Molecular Biology

  37. Genome and metabolic network of "Candidatus Phaeomarinobacter ectocarpi" Ec32, a new candidate genus of Alphaproteobacteria frequently associated with brown algae

    Dittami, S. M., Barbeyron, T., Boyen, C., Cambefort, J., Collet, G., Delage, L., Gobet, A., Groisillier, A., Leblanc, C., Michel, G., Scornet, D., Siegel, A., Tapia, J. E. & Tonon, T., 25 Jul 2014

    Article in Frontiers in genetics

  38. EGFR as a potential therapeutic target for a subset of muscle-invasive bladder cancers presenting a basal-like phenotype

    Rebouissou, S., Bernard-Pierrot, I., de Reyniès, A., Lepage, M-L., Krucker, C., Chapeaublanc, E., Hérault, A., Kamoun, A., Caillault, A., Letouzé, E., Elarouci, N., Neuzillet, Y., Denoux, Y., Molinié, V., Vordos, D., Laplanche, A., Maillé, P., Soyeux, P., Ofualuka, K., Reyal, F. & 8 others, Biton, A., Sibony, M., Paoletti, X., Southgate, J., Benhamou, S., Lebret, T., Allory, Y. & Radvanyi, F., 9 Jul 2014

    Article in Science Translational Medicine

  39. Commensal-pathogen interactions in the intestinal tract: lactobacilli promote infection with, and are promoted by, helminth parasites

    Reynolds, L. A., Smith, K. A., Filbey, K. J., Harcus, Y., Hewitson, J. P., Redpath, S. A., Valdez, Y., Yebra, M. J., Finlay, B. B. & Maizels, R. M., 1 Jul 2014

    Article in Gut Microbes

  40. Biochemistry of high stearic sunflower, a new source of saturated fats

    Salas, JJ., Martinez-Force, E., Harwood, J. L., Venegas-Caleron, M., Aznar-Moreno, JA., Moreno-Perez, AJ., Ruiz-Lopez, N., Serrano-Vega, MJ., Graham, I. A., Mullen, RT. & Garces, R., Jul 2014

    Article in Progress in Lipid Research

  41. LaSSO, a strategy for genome-wide mapping of intronic lariats and branch points using RNA-seq

    Bitton, D. A., Rallis, C., Jeffares, D. C., Smith, G. C., Chen, Y. Y. C., Codlin, S., Marguerat, S. & Bähler, J., Jul 2014

    Article in Genome Research

  42. Distinct stromal cell factor combinations can separately control hematopoietic stem cell survival, proliferation, and self-renewal

    Wohrer, S., Knapp, DJHF., Copley, MR., Benz, C., Kent, DG., Rowe, K., Babovic, S., Mader, H., Oostendorp, RAJ. & Eaves, CJ., 26 Jun 2014

    Article in Cell reports

  43. Downscaling reveals diverse effects of anthropogenic climate warming on the potential for local environments to support malaria transmission

    Paaijmans, K. P., Blanford, J. I., Crane, R. G., Mann, M. E., Ning, L., Schreiber, K. V. & Thomas, M. B., 19 Jun 2014

    Article in Climatic change

  44. Genome sequencing of two Neorhizobium galegae strains reveals a noeT gene responsible for the unusual acetylation of the nodulation factors

    Österman, J., Marsh, J., Laine, P., Zeng, Z., Alatalo, E., Sullivan, J., Young, J. P. W., Thomas-Oates, J., Paulin, L. & Lindström, K., 19 Jun 2014

    Article in BMC Genomics

  45. Selective targeting of TGF-β activation to treat fibroinflammatory airway disease

    Minagawa, S., Lou, J., Seed, R. I., Cormier, A., Wu, S., Cheng, Y., Murray, L., Tsui, P., Connor, J., Herbst, R., Govaerts, C., Barker, T., Cambier, S., Yanagisawa, H., Goodsell, A., Hashimoto, M., Brand, O. J., Cheng, R., Ma, R., McKnelly, K. J. & 12 others, Wen, W., Hill, A., Jablons, D., Wolters, P., Kitamura, H., Araya, J., Barczak, A. J., Erle, D. J., Reichardt, L. F., Marks, J. D., Baron, J. L. & Nishimura, S. L., 18 Jun 2014

    Article in Science Translational Medicine

  46. Transcriptome and methylome profiling reveals relics of genome dominance in the mesopolyploid Brassica oleracea

    Parkin, I. A., Koh, C., Tang, H., Robinson, S. J., Kagale, S., Clarke, W. E., Town, C. D., Nixon, J., Krishnakumar, V., Bidwell, S. L., Denoeud, F., Belcram, H., Links, M. G., Just, J., Clarke, C., Bender, T., Huebert, T., Mason, A. S., Pires, C. J., Barker, G. & 12 others, Moore, J., Walley, P. G., Manoli, S., Batley, J., Edwards, D., Nelson, M. N., Wang, X., Paterson, A. H., King, G., Bancroft, I., Chalhoub, B. & Sharpe, A. G., 10 Jun 2014

    Article in Genome biology

  47. Gene Mining for Environmental Studies and Applications: Examples from Marine Organisms

    Dittami, S. M. & Tonon, T., 9 Jun 2014, Outstanding Marine Molecules: Chemistry, Biology, Analysis. Wiley-Blackwell, p. 435-456 22 p.

    Research output: Chapter in Book/Report/Conference proceedingChapter

  48. Order matters: mutation order influences tumour evolution and stem cell potency by altering transcriptional consequences of the second mutation

    Kent, D., Ortmann, CA., Silber, Y., Nangalia, J., Baxter, J., Massie, CE., Papaemmanuil, E., Menon, S., Bellosillo, B., Besses, C., Doehner, K., Vassiliou, GS., Campbell, P. J. & Green, A. R., 1 Jun 2014

    Article in Haematologica-The hematology journal

  49. Knockout tissue models - targeted gene disruption in three dimensions

    Carstairs, A., Marshall, J. & Genever, P., Jun 2014, The Biochemist, 36, 3, p. 14-18.

    Research output: Contribution to specialist publicationArticle

  50. Phosphorylated c-Mpl tyrosine 591 regulates thrombopoietin-induced signaling

    Sangkhae, V., Saur, S. J., Kaushansky, A., Kaushansky, K. & Hitchcock, I. S., Jun 2014

    Article in Experimental hematology

  51. Single-molecule in vivo imaging of bacterial respiratory complexes indicates delocalized oxidative phosphorylation

    Llorente-Garcia, I., Lenn, T., Erhardt, H., Harriman, O. L., Liu, L-N., Robson, A., Chiu, S-W., Matthews, S., Willis, N. J., Bray, C. D., Lee, S-H., Shin, J. Y., Bustamante, C., Liphardt, J., Friedrich, T., Mullineaux, C. W. & Leake, M. C., Jun 2014

    Article in Biochimica et Biophysica Acta. Bioenergetics

  52. Steam explosion of oilseed rape straw: establishing key determinants of saccharification efficiency

    Wood, I. P., Elliston, A., Collins, S. R. A., Wilson, D., Bancroft, I. & Waldron, K. W., Jun 2014

    Article in BIORESOURCE TECHNOLOGY

  53. Natural variation reveals that intracellular distribution of ELF3 protein is associated with function in the circadian clock

    Anwer, M. U., Boikoglou, E., Herrero, E., Hallstein, M., Davis, A. M., Velikkakam James, G., Nagy, F. & Davis, S. J., 27 May 2014

    Article in eLife

  54. Fate mapping reveals origin and dynamics of lymph node follicular dendritic cells

    Jarjour, M., Jorquera, A., Mondor, I., Wienert, S., Narang, P., Coles, M. C., Klauschen, F. & Bajénoff, M., 26 May 2014

    Article in Journal of Experimental Medicine

  55. High efficiency proton beam generation through target thickness control in femtosecond laser-plasma interactions

    Green, J. S., Robinson, A. P. L., Booth, N., Carroll, D. C., Dance, R. J., Gray, R. J., MacLellan, D. A., McKenna, P., Murphy, C. D., Rusby, D. & Wilson, L., 26 May 2014

    Article in Applied Physics Letters

  56. The Brassica oleracea genome reveals the asymmetrical evolution of polyploid genomes

    Liu, S., Liu, Y., Yang, X., Tong, C., Edwards, D., Parkin, I. A. P., Zhao, M., Ma, J., Yu, J., Huang, S., Wang, X., Wang, J., Lu, K., Fang, Z., Bancroft, I., Yang, T-J., Hu, Q., Wang, X., Yue, Z., Li, H. & 66 others, Yang, L., Wu, J., Zhou, Q., Wang, W., King, G. J., Pires, J. C., Lu, C., Wu, Z., Sampath, P., Wang, Z., Guo, H., Pan, S., Yang, L., Min, J., Zhang, D., Jin, D., Li, W., Belcram, H., Tu, J., Guan, M., Qi, C., Du, D., Li, J., Jiang, L., Batley, J., Sharpe, A. G., Park, B-S., Ruperao, P., Cheng, F., Waminal, N. E., Huang, Y., Dong, C., Wang, L., Li, J., Hu, Z., Zhuang, M., Huang, Y., Huang, J., Shi, J., Mei, D., Liu, J., Lee, T-H., Wang, J., Jin, H., Li, Z., Li, X., Zhang, J., Xiao, L., Zhou, Y., Liu, Z., Liu, X., Qin, R., Tang, X., Liu, W., Wang, Y., Zhang, Y., Lee, J., Kim, H. H., Denoeud, F., Xu, X., Liang, X., Hua, W., Wang, X., Wang, J., Chalhoub, B. & Paterson, A. H., 23 May 2014

    Article in Nature Communications

  57. The phosphorylation of Hsp20 enhances its association with amyloid-β to increase protection against neuronal cell death

    Cameron, R. T., Quinn, S. D., Cairns, L. S., MacLeod, R., Samuel, I. D. W., Smith, B. O., Carlos Penedo, J. & Baillie, G. S., 20 May 2014

    Article in Molecular and cellular neuroscience

  58. JAK2V617F homozygosity drives a phenotypic switch in myeloproliferative neoplasms, but is insufficient to sustain disease

    Li, J., Kent, DG., Godfrey, A. L., Manning, H., Nangalia, J., Aziz, A., Chen, E., Saeb-Parsy, K., Fink, J. & Sneade, R., 15 May 2014

    Article in Blood

  59. The atypical chemokine receptor CCRL1 shapes functional CCL21 gradients in lymph nodes

    Ulvmar, M. H., Werth, K., Braun, A., Kelay, P., Hub, E., Eller, K., Chan, L., Lucas, B., Novitzky-Basso, I., Nakamura, K., Rülicke, T., Nibbs, R. J. B., Worbs, T., Förster, R. & Rot, A., 11 May 2014

    Article in Nature immunology

  60. DARC shuttles inflammatory chemokines across the blood-brain barrier during autoimmune central nervous system inflammation

    Minten, C., Alt, C., Gentner, M., Frei, E., Deutsch, U., Lyck, R., Schaeren-Wiemers, N., Rot, A. & Engelhardt, B., 1 May 2014

    Article in Brain : a journal of neurology

  61. Independent mobility of proteins and lipids in the plasma membrane of Escherichia coli

    Nenninger, A., Mastroianni, G., Robson, A., Lenn, T., Xue, Q., Leake, M. C. & Mullineaux, C. W., 30 Apr 2014

    Article in Molecular Microbiology

  62. A H+-ATPase That Energizes Nutrient Uptake during Mycorrhizal Symbioses in Rice and Medicago truncatula

    Wang, E., Yu, N., Bano, S. A., Liu, C., Miller, A. J., Cousins, D., Zhang, X., Ratet, P., Tadege, M., Mysore, K. S., Downie, J. A., Murray, J. D., Oldroyd, G. E. D. & Schultze, M., 29 Apr 2014

    Article in The Plant Cell

  63. Cellular origins of auditory event-related potential deficits in Rett syndrome

    Goffin, D., Brodkin, E. S., Blendy, J. A., Siegel, S. J. & Zhou, Z., 28 Apr 2014

    Article in Nature neuroscience

  64. The unfolded protein response governs integrity of the haematopoietic stem-cell pool during stress

    van Galen, P., Kreso, A., Mbong, N., Kent, DG., Fitzmaurice, T., Chambers, JE., Xie, S., Laurenti, E., Hermans, K. & Eppert, K., 28 Apr 2014

    Article in Nature

  65. Wigwams: Identifying gene modules co-regulated across multiple biological conditions

    Polanski, K., Rhodes, J., Hill, C., Zhang, P., Jenkins, D. J., Kiddle, S. J., Jironkin, A., Beynon, J., Buchanan-Wollaston, V., Ott, S. & Denby, K. J., 1 Apr 2014

    Article in Bioinformatics

  66. Pathogens and host immunity in the ancient human oral cavity

    Warinner, C., Rodrigues, J. F. M., Vyas, R., Trachsel, C., Shved, N., Grossmann, J., Radini, A., Hancock, Y., Tito, R. Y., Fiddyment, S., Speller, C., Hendy, J., Charlton, S., Luder, H. U., Salazar-García, D. C., Eppler, E., Seiler, R., Hansen, L. H., Castruita, J. A. S., Barkow-Oesterreicher, S. & 12 others, Teoh, K. Y., Kelstrup, C. D., Olsen, J. V., Nanni, P., Kawai, T., Willerslev, E., von Mering, C., Lewis, C. M., Collins, M. J., Gilbert, M. T. P., Rühli, F. & Cappellini, E., Apr 2014

    Article in Nature genetics

  67. The PTTG1-binding factor (PBF/PTTG1IP) regulates p53 activity in thyroid cells

    Read, M. L., Seed, R. I., Fong, J. C. W., Modasia, B., Ryan, G. A., Watkins, R. J., Gagliano, T., Smith, V. E., Stratford, A. L., Kwan, P. K., Sharma, N., Dixon, O. M., Watkinson, J. C., Boelaert, K., Franklyn, J. A., Turnell, A. S. & McCabe, C. J., Apr 2014

    Article in Endocrinology

  68. Biochemistry: Unlocking ancient protein palimpsests

    Cappellini, E., Collins, M. J. & Gilbert, M. T. P., 21 Mar 2014

    Article in Science

  69. Allele-specific knockdown of ALS-associated mutant TDP-43 in neural stem cells derived from induced pluripotent stem cells

    Nishimura, A. L., Shum, C., Scotter, E. L., Abdelgany, A., Sardone, V., Wright, J., Lee, Y., Chen, H-J., Bilican, B., Carrasco, M., Maniatis, T., Chandran, S., Rogelj, B., Gallo, J-M. & Shaw, C. E., 20 Mar 2014

    Article in PLoS ONE

  70. Differential roles of the ubiquitin proteasome system and autophagy in the clearance of soluble and aggregated TDP-43 species

    Scotter, E. L., Vance, C., Nishimura, A. L., Lee, Y., Chen, H-J., Urwin, H., Sardone, V., Mitchell, J. C., Rogelj, B., Rubinsztein, D. C. & Shaw, C. E., 15 Mar 2014

    Article in Journal of Cell Science

  71. How the structure of the large subunit controls function in an oxygen-tolerant [NiFe]-hydrogenase

    Bowman, L., Flanagan, L., Fyfe, P. K., Parkin, A., Hunter, W. N. & Sargent, F., 15 Mar 2014

    Article in Biochemical journal

  72. Naturally acquired antibodies specific for Plasmodium falciparum reticulocyte-binding protein homologue 5 inhibit parasite growth and predict protection from malaria.

    Tran, T. M., Ongoiba, A., Coursen, J., Crosnier, C., Diouf, A., Huang, C-Y., Li, S., Doumbo, S., Doumtabe, D., Kone, Y., Bathily, A., Dia, S., Niangaly, M., Dara, C., Sangala, J., Miller, L. H., Doumbo, O. K., Kayentao, K., Long, C. A., Miura, K. & 3 others, Wright, G. J., Traore, B. & Crompton, P. D., 1 Mar 2014

    Article in The Journal of Infectious Diseases

  73. Disease Epidemiology in Arthropods Is Altered by the Presence of Nonprotective Symbionts

    Ryder, J. J., Hoare, M-J., Pastok, D., Bottery, M. J., Boots, M., Fenton, A., Atkinson, D., Knell, R. J. & Hurst, G. D. D., Mar 2014

    Article in The American Naturalist

  74. New nomenclature for atypical chemokine receptors

    Bachelerie, F., Graham, G. J., Locati, M., Mantovani, A., Murphy, P. M., Nibbs, R., Rot, A., Sozzani, S. & Thelen, M., Mar 2014

    Article in Nature immunology

  75. miRNA-221 and miRNA-222 synergistically function to promote vascular calcification

    Mackenzie, N. C. W., Staines, K. A., Zhu, D., Genever, P. & Macrae, V. E., Mar 2014

    Article in CELL BIOCHEMISTRY AND FUNCTION

  76. A zebrafish compound screen reveals modulation of neutrophil reverse migration as an anti-inflammatory mechanism

    Robertson, A. L., Holmes, G. R., Bojarczuk, A. N., Burgon, J., Loynes, C. A., Chimen, M., Sawtell, A. K., Hamza, B., Willson, J., Walmsley, S. R., Anderson, S. R., Coles, M. C., Farrow, S. N., Solari, R., Jones, S., Prince, L. R., Irimia, D., Rainger, G. E., Kadirkamanathan, V., Whyte, M. K. B. & 1 others, Renshaw, S. A., 26 Feb 2014

    Article in Science Translational Medicine

  77. Identification of ELF3 as an early transcriptional regulator of human urothelium

    Böck, M., Hinley, J., Schmitt, C., Wahlicht, T., Kramer, S. & Southgate, J., 15 Feb 2014

    Article in Developmental Biology

  78. A novel activating, germline JAK2 mutation, JAK2R564Q, causes familial essential thrombocytosis

    Etheridge, S. L., Cosgrove, M. E., Sangkhae, V., Corbo, L. M., Roh, M. E., Seeliger, M. A., Chan, E. L. & Hitchcock, I. S., 13 Feb 2014

    Article in Blood

  79. JAK2V617F-positive endothelial cells contribute to clotting abnormalities in myeloproliferative neoplasms

    Etheridge, S. L., Roh, M. E., Cosgrove, M. E., Sangkhae, V., Fox, N. E., Chen, J., López, J. A., Kaushansky, K. & Hitchcock, I. S., 11 Feb 2014

    Article in Proceedings of the National Academy of Sciences of the United States of America

  80. Probing bacterial uptake of glycosylated ciprofloxacin conjugates

    Milner, S. J., Carrick, C. T., Kerr, K. G., Snelling, A. M., Thomas, G. H., Duhme-Klair, A-K. & Routledge, A., 10 Feb 2014

    Article in Chembiochem

  81. Innate and adaptive type 2 immune cell responses in genetically controlled resistance to intestinal helminth infection

    Filbey, K. J., Grainger, J. R., Smith, K. A., Boon, L., van Rooijen, N., Harcus, Y., Jenkins, S., Hewitson, J. P. & Maizels, R. M., 5 Feb 2014

    Article in Immunology and cell biology

  82. Temperature alters Plasmodium blocking by Wolbachia

    Murdock, C. C., Blanford, S., Hughes, G. L., Rasgon, J. L. & Thomas, M. B., 3 Feb 2014

    Article in Scientific Reports

  83. Mannitol metabolism in brown algae involves a new phosphatase family

    Groisillier, A., Shao, Z., Michel, G., Goulitquer, S., Bonin, P., Krahulec, S., Nidetzky, B., Duan, D., Boyen, C. & Tonon, T., 1 Feb 2014

    Article in Journal of Experimental Botany

  84. An essential role for LPA signalling in telencephalon development

    Geach, T. J., Faas, L., Devader, C., Gonzalez-Cordero, A., Brunsdon, H., tabler, J., Isaacs, H. V. & Dale, L., Feb 2014

    Article in Development

  85. Phytoextraction as a tool for green chemistry

    Hunt, A. J., Anderson, C., Bruce, N. C., Garcia, A. M., Graedel, T., Hodson, M. E., Meech, J., Nassar, N., Parker, H. L., Rylott, L., Sotiriou, K., Zhang, Q. & Clark, J. H., Feb 2014

    Article in Green Processing and Synthesis

  86. The control of seed oil polyunsaturate content in the polyploid crop species Brassica napus

    Wells, R., Trick, M., Soumpourou, E., Clissold, L., Morgan, C., Werner, P., Gibbard, C., Clarke, M., Jennaway, R. & Bancroft, I., Feb 2014

    Article in Molecular Breeding

  87. The secreted triose phosphate isomerase of Brugia malayi is required to sustain microfilaria production in vivo

    Hewitson, J. P., Rückerl, D., Harcus, Y., Murray, J., Webb, L. M., Babayan, S. A., Allen, J. E., Kurniawan, A. & Maizels, R. M., Feb 2014

    Article in PLOS PATHOGENS

  88. Validation of N-myristoyltransferase as an antimalarial drug target using an integrated chemical biology approach

    Wright, M. H., Clough, B., Rackham, M. D., Rangachari, K., Brannigan, J. A., Grainger, M., Moss, D. K., Bottrill, A. R., Heal, W. P., Broncel, M., Serwa, R. A., Brady, D., Mann, D. J., Leatherbarrow, R. J., Tewari, R., Wilkinson, A. J., Holder, A. A. & Tate, E. W., Feb 2014

    Article in Nature Chemistry

  89. Optimization of DNA recovery and amplification from non-carbonized archaeobotanical remains

    Wales, N., Andersen, K., Cappellini, E., Ávila-Arcos, M. C. & Gilbert, M. T. P., 27 Jan 2014

    Article in PLoS ONE

  90. Effects of Elevated CO2 on Litter Chemistry and Subsequent Invertebrate Detritivore Feeding Responses

    Dray, M. W., Crowther, T. W., Thomas, S. M., A'Bear, A. D., Godbold, D. L., Ormerod, S. J., Hartley, S. E. & Jones, T. H., 22 Jan 2014

    Article in PLoS ONE

  91. A Nonsense Mutation in Mouse Tardbp Affects TDP43 Alternative Splicing Activity and Causes Limb-Clasping and Body Tone Defects

    Ricketts, T., McGoldrick, P., Fratta, P., de Oliveira, H. M., Kent, R., Phatak, V., Brandner, S., Blanco, G., Greensmith, L., Acevedo-Arozena, A. & Fisher, E. M. C., 21 Jan 2014

    Article in PLoS ONE

  92. Evaluating the composition and processing potential of novel sources of Brazilian biomass for sustainable biorenewables production

    Lima, M. A., Gomez, L. D., Steele-King, C. G., Simister, R., Bernardinelli, O. D., Carvalho, M. A., Rezende, C. A., Labate, C. A., Deazevedo, E. R., McQueen-Mason, S. J., Polikarpov, I. & McQueen Mason, S. J., 18 Jan 2014

    Article in Biotechnology for biofuels

  93. Genomic confirmation of hybridisation and recent inbreeding in a vector-isolated Leishmania population

    Rogers, M. B., Downing, T., Smith, B. A., Imamura, H., Sanders, M., Svobodova, M., Volf, P., Berriman, M., Cotton, J. A. & Smith, D. F., 16 Jan 2014

    Article in PLoS Genetics

  94. Evolutionary explosion

    Thomas, C. D. & Pearce, F., 11 Jan 2014

    Editorial in New Scientist

  95. Dissecting functions of the conserved oligomeric Golgi tethering complex using a cell free assay

    Cottam, N. P., Wilson, K. M., Ng, B. G., Körner, C., Freeze, H. H. & Ungar, D., 4 Jan 2014

    Article in Traffic

  96. Ancient biomolecules from archaeobotanical remains

    Wales, N., Andersen, K. & Cappellini, E., 1 Jan 2014, Method and Theory in Paleoethnobotany. University of Colorado Press, p. 293-313 21 p.

    Research output: Chapter in Book/Report/Conference proceedingChapter

  97. Automated enzyme classification by formal concept analysis

    Coste, F., Garet, G., Groisillier, A., Nicolas, J. & Tonon, T., 1 Jan 2014, Formal Concept Analysis - 12th International Conference, ICFCA 2014, Proceedings. Springer-Verlag, p. 235-250 16 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 8478 LNAI).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  98. Neutralization of Plasmodium falciparum merozoites by antibodies against PfRH5. Journal of Immunology

    Douglas, A. D., Williams, A. R., Knuepfer, E., Illingworth, J. J., Furze, J. M., Crosnier, C., Choudhary, P., Bustamante, L. Y., Zakutansky, S. E., Awuah, D. K., Alanine, D. G. W., Theron, M., Worth, A., Shimkets, R., Rayner, J. C., Holder, A. A., Wright, G. J. & Draper, S. J., 1 Jan 2014

    Article in Journal of Immunology

  99. Quantifying and understanding carbon storage and sequestration within the Eastern Arc Mountains of Tanzania, a tropical biodiversity hotspot

    Willcock, S., Phillips, O. L., Platts, P. J., Balmford, A., Burgess, N. D., Lovett, J. C., Ahrends, A., Bayliss, J., Doggart, N., Doody, K., Fanning, E., Green, J. M. H., Hall, J., Howell, K. L., Marchant, R., Marshall, A. R., Mbilinyi, B., Munishi, P. K. T., Owen, N., Swetnam, R. D. & 2 others, Topp-Jorgensen, E. J. & Lewis, S. L., 1 Jan 2014

    Article in Carbon Balance and Management

  100. The dynamics of genome replication using deep sequencing

    Müller, C. A., Hawkins, M., Retkute, R., Malla, S., Wilson, R., Blythe, M. J., Nakato, R., Komata, M., Shirahige, K., de Moura, A. P. S. & Nieduszynski, C. A., 1 Jan 2014

    Article in Nucleic Acids Research

  101. Tropical forest fragments contribute to species richness in adjacent oil palm plantations

    Lucey, J. M., Tawatao, N., Senior, M. J. M., Chey, V. K., Benedick, S., Hamer, K. C., Woodcock, P., Newton, R. J., Bottrell, S. H. & Hill, J. K., 1 Jan 2014

    Article in Biological Conservation

  102. International Union of Basic and Clinical Pharmacology. [corrected]. LXXXIX: Update on the extended family of chemokine receptors and introducing a new nomenclature for atypical chemokine receptors

    Bachelerie, F., Ben-Baruch, A., Burkhardt, A. M., Combadiere, C., Farber, J. M., Graham, G. J., Horuk, R., Sparre-Ulrich, A. H., Locati, M., Luster, A. D., Mantovani, A., Matsushima, K., Murphy, P. M., Nibbs, R., Nomiyama, H., Power, C. A., Proudfoot, A. E. I., Rosenkilde, M. M., Rot, A., Sozzani, S. & 3 others, Thelen, M., Yoshie, O. & Zlotnik, A., Jan 2014

    Article in Pharmacological reviews

  103. Real-time probing of β-amyloid self-assembly and inhibition using fluorescence self-quenching between neighbouring dyes

    Quinn, S. D., Dalgarno, P. A., Cameron, R. T., Hedley, G. J., Hacker, C., Lucocq, J. M., Baillie, G. S., Samuel, I. D. W. & Penedo, J. C., Jan 2014

    Article in Molecular BioSystems

  104. Use of donor bladder tissues for in vitro research

    Garthwaite, M., Hinley, J., Cross, W., Warwick, R. M., Ambrose, A., Hardaker, H., Eardley, I. & Southgate, J., Jan 2014

    Article in BJU International

  105. Alternative acetate production pathways in chlamydomonas reinhardtii during dark anoxia and the dominant role of chloroplasts in fermentative acetate production

    Yang, W., Catalanotti, C., D’adamo, S., Wittkopp, T. M., Ingram-Smith, C. J., Mackinder, L., Miller, T. E., Heuberger, A. L., Peers, G., Smith, K. S., Jonikas, M. C., Grossman, A. R. & Posewitz, M. C., 2014

    Article in The Plant Cell

  106. Chondrus crispus - A present and historical model organism for red seaweeds

    Collén, J., Cornish, M. L., Craigie, J., Ficko-Blean, E., Hervé, C., Krueger-Hadfield, S. A., Leblanc, C., Michel, G., Potin, P., Tonon, T. & Boyen, C., 2014

    Article in Advances in Botanical Research

  107. Cloning of Recombinant Monoclonal Antibodies from Hybridomas in a Single Mammalian Expression Plasmid

    Müller-Sienerth, N., Crosnier, C., Wright, G. J. & Staudt, N., 2014, Monoclonal Antibodies. Ossipow, V. & Fischer, N. (eds.). Totowa, NJ: Humana Press, Vol. 1131. p. 229-240 12 p. (Methods in molecular biology).

    Research output: Chapter in Book/Report/Conference proceedingChapter

  108. Complete genome sequence of Burkholderia phymatum STM815T, a broad host range and efficient nitrogen-fixing symbiont of Mimosa species

    Moulin, L., Klonowska, A., Bournaud, C., Booth, K., Vriezen, J., Melkonian, R., James, E. K., Young, J., Bena, G., Hauser, L., Land, M., Kyrpides, N., Bruce, D., Chain, P., Copeland, A., Pitluck, S., Woyke, T., Lizotte-Waniewski, M., Bristow, J. & Riley, M., 2014

    Article in Standards in Genomic Sciences

  109. Concentrations and effects of air pollutants on vegetation in South-East Asia

    Emberson, L. D., Morris, J., Bueker, P., Harmens, H. & Mills, G., 2014, Air Pollution: Deposition to and impacts on vegetation in (South-)East Europe, Caucasus, Central Asia (EECCA/SEE) and South-East Asia. Mills, G. & Harmens, H. (eds.). Centre for Ecology and Hydrology, Bangor, UK: ICP Vegetation, p. 25-44 20 p.

    Research output: Chapter in Book/Report/Conference proceedingChapter

  110. Effect of a mutagenized acyl‐ACP thioesterase FATA allele from sunflower with improved activity in tobacco leaves and Arabidopsis seeds.

    Moreno-Pérez, A. J., Venegas‐Calerón, M., Vaistij, F. E., Salas, J. J., Larson, T. R., Garcés, R., Graham, I. A. & Martínez-Force, E., 2014

    Article in Planta

  111. Izumo meets Juno

    Bianchi, E. & Wright, G. J., 2014

    Article in Cell cycle

  112. Measurement of the p-process branching point reaction 76Se(α,γ)80Kr in inverse kinematics with DRAGON

    Fallis, J., Akers, C., Laird, A., Spyrou, A., Christian, G., Connolly, D., Davids, B., Dillman, I., Hager, U., O'Malley, P., Riley, J., Rojas, A., Ruiz, C., Simon, A. & Quinn, S., 2014

    Article in Proceedings of Science

  113. Novel Approaches to the Visualization and Quantification of Biological Simulations by Emulating Experimental Techniques

    Butler, J. A., Alden, K. J., Viega-Fernandes, H., Timmis, J. & Coles, M. C., 2014, Artificial Life 14: Proceedings of the Fourteenth International Conference on the Synthesis and Simulation of Living Systems. Sayama, H., Rieffel, J., Risi, S., Doursat, R. & Lipson, H. (eds.). MIT Press, p. 614-621 7 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  114. The Pi Swarm: A low-cost platform for swarm robotics research and education

    Hilder, J. A., Naylor, R. F., Rizihs, A., Franks, D. W. & Timmis, J., 2014, LNCS. Springer, Vol. 8717. p. 151-162

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  115. Variation in the chemical composition of wheat straw: the role of tissue ratio and composition

    Collins, S. R., Wellner, N., Martinez Bordonado, I., Harper, A. L., Miller, C. N., Bancroft, I. & Waldron, K. W., 2014

    Article in Biotechnology for biofuels