Search research publications and outputs

  1. 2015
  2. Crowding-Induced Hybridization of Single DNA Hairpins

    Baltierra-Jasso, L. E., Morten, M. J., Laflör, L., Quinn, S. D. & Magennis, S. W., 11 Dec 2015

    Article in Journal of the American Chemical Society

  3. Cytochrome c-based domain modularity governs genus-level diversification of electron transfer to dissimilatory nitrite reduction

    Aas, F. E., Li, X., Edwards, J., Hongrø Solbakken, M., Deeudom, M., Vik, Å., Moir, J., Koomey, M. & Aspholm, M., 11 Dec 2015

    Article in Environmental Microbiology

  4. Critical role of chlamydomonas reinhardtii ferredoxin-5 in maintaining membrane structure and dark metabolism

    Yang, W., Wittkopp, T. M., Li, X., Warakanont, J., Dubini, A., Catalanotti, C., Kim, R. G., Nowack, E. C. M., Mackinder, L. C. M., Aksoy, M., Page, M. D., D'Adamof, S., Saroussi, S., Heinnickel, M., Johnson, X., Richaud, P., Alric, J., Boehm, M., Jonikas, M. C., Benningh, C. & 3 others, Merchant, S. S., Posewitz, M. C. & Grossman, A. R., 1 Dec 2015

    Article in Proceedings of the National Academy of Sciences of the United States of America

  5. Identification, evolution, and expression partitioning of miRNAs in allopolyploid Brassica napus

    Shen, E., Zou, J., Hubertus Behrens, F., Chen, L., Ye, C., Dai, S., Li, R., Ni, M., Jiang, X., Qiu, J., Liu, Y., Wang, W., Zhu, Q-H., Chalhoub, B., Bancroft, I., Meng, J., Cai, D. & Fan, L., 1 Dec 2015

    Article in Journal of Experimental Botany

  6. Jasmonate signalling drives time-of-day differences in susceptibility of Arabidopsis to the fungal pathogen Botrytis cinerea

    Ingle, R. A., Stoker, C., Stone, W., Adams, N., Smith, R., Grant, M., Carré, I., Roden, L. C. & Denby, K. J., 1 Dec 2015

    Article in Plant Journal

  7. Planting seeds for the future of food

    Green, H., Broun, P., Cakmak, I., Condon, L., Federoff, N., Gonzalez-Valero, J., Graham, I. A., Lewis, J., Maloney, M., Oniang'o, R. K., Sanginga, N., Shewry, P. & Roulin, A., 1 Dec 2015, (E-pub ahead of print)

    Article in Journal of the science of food and agriculture

  8. Plasmonics, Tracking and Manipulating, and Living Cells: general discussion.

    Cordes, T., Moerner, W., Orrit, M., Sekatskii, S., Faez, S., Borri, P., Goswami, H. P., Clark, A., El-Khoury, P., Mayr, S., Mika, J., Lyu, G., Cross, D., Balzarotti, F., Langbein, W., Sandoghdar, V., Jens, M., Chowdhury, A., Meixner, A. J., van Hulst, N. & 7 others, Lounis, B., Stefani, F., Cichos, F., Dahan, M., Novotny, L., Leake, M. C. & Yang, H., 1 Dec 2015

    Article in FARADAY DISCUSSIONS

  9. Rhamnolipid and surfactin production from olive oil mill waste as sole carbon source

    Moya Ramírez, I., Tsaousi, K., Rudden, M., Marchant, R., Jurado Alameda, E., García Román, M. & Banat, I. M., 1 Dec 2015

    Article in BIORESOURCE TECHNOLOGY

  10. Lignocellulose degradation mechanisms across the Tree of Life

    Cragg, S. M., Beckham, G. T., Bruce, N. C., Bugg, T. D. H., Distel, D. L., Dupree, P., Etxabe, A. G., Goodell, B. S., Jellison, J., McGeehan, J. E., McQueen-Mason, S. J., Schnorr, K., Walton, P. H., Watts, J. E. M. & Zimmer, M., Dec 2015

    Review article in Current Opinion in Chemical Biology

  11. Neuronal-glial populations form functional networks in a biocompatible 3D scaffold

    Smith, I., Haag, M., Ugbode, C., Tams, D., Rattray, M., Przyborski, S., Bithell, A. & Whalley, B. J., 16 Nov 2015

    Article in NEUROSCIENCE LETTERS

  12. Vertebrate seed dispersers maintain the composition of tropical forest seedbanks

    Wandrag, E. M., Dunham, A. E., Miller, R. H. & Rogers, H. S., 16 Nov 2015

    Article in AoB Plants

  13. Intrinsic challenges in ancient microbiome reconstruction using 16S rRNA gene amplification

    Ziesemer, K. A., Mann, A. E., Sankaranarayanan, K., Schroeder, H., Ozga, A. T., Brandt, B. W., Zaura, E., Waters-Rist, A., Hoogland, M., Salazar-García, D. C., Aldenderfer, M., Speller, C., Hendy, J., Weston, D. A., MacDonald, S. J., Thomas, G. H., Collins, M. J., Lewis, C. M., Hofman, C. & Warinner, C., 13 Nov 2015

    Article in Scientific Reports

  14. Phytoplankton calcification as an effective mechanism to alleviate cellular calcium poisoning

    Müller, M. N., Barcelos E Ramos, J., Schulz, K. G., Riebesell, U., Kaźmierczak, J., Gallo, F., Mackinder, L., Li, Y., Nesterenko, P. N., Trull, T. W. & Hallegraeff, G. M., 13 Nov 2015

    Article in Biogeosciences

  15. Transcriptional dynamics driving MAMP-triggered immunity and pathogen effector-mediated immunosuppression in Arabidopsis leaves following infection with Pseudomonas syringae pv tomato DC3000

    Lewis, L. A., Polanski, K., de Torres-Zabala, M., Jayaraman, S., Bowden, L., Moore, J., Penfold, C. A., Jenkins, D. J., Hill, C., Baxter, L., Kulasekaran, S., Truman, W., Littlejohn, G., Prusinska, J., Mead, A., Steinbrenner, J., Hickman, R., Rand, D., Wild, D. L., Ott, S. & 5 others, Buchanan-Wollaston, V., Smirnoff, N., Beynon, J., Denby, K. & Grant, M., 13 Nov 2015

    Article in The Plant Cell

  16. MIF interacts with CXCR7 to promote receptor internalization, ERK1/2 and ZAP-70 signaling, and lymphocyte chemotaxis

    Alampour-Rajabi, S., El Bounkari, O., Rot, A., Müller-Newen, G., Bachelerie, F., Gawaz, M., Weber, C., Schober, A. & Bernhagen, J., Nov 2015

    Article in The FASEB Journal

  17. M2 Polarization of Monocytes-Macrophages Is a Hallmark of Indian Post Kala-Azar Dermal Leishmaniasis

    Mukhopadhyay, D., Mukherjee, S., Roy, S., Dalton, J. E., Kundu, S., Sarkar, A., Das, N. K., Kaye, P. M. & Chatterjee, M., 23 Oct 2015

    Article in PLOS NEGLECTED TROPICAL DISEASES

  18. The LRR receptor Islr2 is required for retinal axon routing at the vertebrate optic chiasm. Neural Development

    Panza, P., Sitko, A. A., Maischein, H-M., Koch, I., Flötenmeyer, M., Wright, G. J., Mandai, K., Mason, C. A. & Söllner, C., 22 Oct 2015

    Article in Neural Dev

  19. Genome-wide analysis reveals the extent of EAV-HP integration in domestic chicken

    Wragg, D., Mason, A. S., Yu, L., Kuo, R., Lawal, R. A., Desta, T. T., Mwacharo, J. M., Cho, C-Y., Kemp, S., Burt, D. W. & Hanotte, O., 14 Oct 2015

    Article in BMC Genomics

  20. Processing of Plasmodium falciparum Merozoite Surface Protein MSP1 Activates a Spectrin-Binding Function Enabling Parasite Egress from RBCs

    Das, S., Hertrich, N., Perrin, A. J., Withers-Martinez, C., Collins, C. R., Jones, M. L., Watermeyer, J. M., Fobes, E. T., Martin, S. R., Saibil, H. R., Wright, G. J., Treeck, M., Epp, C. & Blackman, M. J., 14 Oct 2015

    Article in Cell Host & Microbe

  21. Altering Transplantation Time to Avoid Periods of High Temperature Can Efficiently Reduce Bacterial Wilt Disease Incidence with Tomato

    Wei, Z., Huang, J. F., Hu, J., Gu, Y. A., Yang, C. L., Mei, X. L., Shen, Q. R., Xu, Y. C. & Friman, V. P., 6 Oct 2015

    Article in PLoS ONE

  22. NLRP3 inflammasome activation downstream of cytoplasmic LPS recognition by both caspase-4 and caspase-5

    Baker, P. J., Boucher, D., Bierschenk, D., Tebartz, C., Whitney, P. G., D'Silva, D. B., Tanzer, M. C., Monteleone, M., Robertson, A. A. B., Cooper, M. A., Alvarez-Diaz, S., Herold, M. J., Bedoui, S., Schroder, K. & Masters, S. L., 6 Oct 2015

    Article in European Journal of Immunology

  23. Standards for plant synthetic biology: A common syntax for exchange of DNA parts

    Patron, N. J., Orzaez, D., Marillonnet, S., Warzecha, H., Matthewman, C., Youles, M., Raitskin, O., Leveau, A., Farré, G., Rogers, C., Smith, A., Hibberd, J., Webb, A. A. R., Locke, J., Schornack, S., Ajioka, J., Baulcombe, D. C., Zipfel, C., Kamoun, S., Jones, J. D. G. & 38 others, Kuhn, H., Robatzek, S., Van Esse, H. P., Sanders, D., Oldroyd, G., Martin, C., Field, R., O'Connor, S., Fox, S., Wulff, B., Miller, B., Breakspear, A., Radhakrishnan, G., Delaux, P. M., Loqué, D., Granell, A., Tissier, A., Shih, P., Brutnell, T. P., Quick, W. P., Rischer, H., Fraser, P. D., Aharoni, A., Raines, C., South, P. F., Ané, J. M., Hamberger, B. R., Langdale, J., Stougaard, J., Bouwmeester, H., Udvardi, M., Murray, J. A. H., Ntoukakis, V., Schäfer, P., Denby, K., Edwards, K. J., Osbourn, A. & Haseloff, J., 1 Oct 2015

    Article in The New phytologist

  24. CdiA promotes receptor-independent intercellular adhesion

    Ruhe, Z., Townsley, L., Wallace, A., King, A. D., Van Der Woude, M., Low, D. A., Yildiz, FH. & Hayes, CS., 25 Sep 2015

    Article in Molecular Microbiology

  25. Identification of QTL markers contributing to plant growth, oil yield and fatty acid composition in the oilseed crop Jatropha curcas L

    King, A. J., Montes, L., Clarke, J. G., Iztep, J., Perez, C. A. A., Jongschaap, R. E. E., Visser, R. G. F., van Loo, E. & Graham, I. A., 25 Sep 2015

    Article in Biotechnology for biofuels

  26. Type 3 innate lymphoid cells maintain intestinal epithelial stem cells after tissue damage

    Aparicio-Domingo, P., Romera-Hernandez, M., Karrich, J. J., Cornelissen, F., Papazian, N., Lindenbergh-Kortleve, D. J., Butler, J. A., Boon, L., Coles, M. C., Samsom, J. N. & Cupedo, T., 21 Sep 2015

    Article in The Journal of experimental medicine

  27. UDCA exerts beneficial effect on mitochondrial dysfunction in LRRK2G2019S carriers and in vivo

    Mortiboys, H., Furmston, R., Bronstad, G., Aasly, J., Elliott, C. & Bandmann, O., 8 Sep 2015

    Article in Neurology

  28. Structures of archaeal DNA segregation machinery reveal bacterial and eukaryotic linkages

    Schumacher, M. A., Tonthat, N. K., Lee, J., Rodriguez-Castañeda, F. A., Chinnam, N. B., Kalliomaa-Sanford, A. K., Ng, I. W., Barge, M. T., Shaw, P. L. R. & Barillà, D., 4 Sep 2015

    Article in Science

  29. Entomological Monitoring and Evaluation: Diverse Transmission Settings of ICEMR Projects Will Require Local and Regional Malaria Elimination Strategies

    Conn, J. E., Norris, D. E., Donnelly, M. J., Beebe, N. W., Burkot, T. R., Coulibaly, M. B., Chery, L., Eapen, A., Keven, J. B., Kilama, M., Kumar, A., Lindsay, S. W., Moreno, M., Quinones, M., Reimer, L. J., Russell, T. L., Smith, D. L., Thomas, M. B., Walker, E. D., Wilson, M. L. & 1 others, Yan, G., 1 Sep 2015

    Article in American journal of tropical medicine and hygiene

  30. Index sorting resolves heterogeneous murine hematopoietic stem cell populations

    Schulte, R., Wilson, NK., Prick, JCM., Cossetti, C., Maj, MK., Gottgens, B. & Kent, DG., 1 Sep 2015

    Article in Experimental hematology

  31. Hemiparasitic plant impacts animal and plant communities across four trophic levels

    Hartley, S. E., Green, J. P., Massey, F. P., Press, M. C. P., Stewart, A. J. A. & John, E. A., Sep 2015

    Article in Ecology

  32. Natural variants of ELF3 affect thermomorphogenesis by transcriptionally modulating PIF4-dependent auxin response genes

    Raschke, A., Ibañez, C., Ullrich, K. K., Anwer, M. U., Becker, S., Glöckner, A., Trenner, J., Denk, K., Saal, B., Sun, X., Ni, M., Davis, S. J., Delker, C. & Quint, M., 14 Aug 2015

    Article in BMC Plant Biology

  33. The human urothelial tight junction: claudin 3 and the ZO-1α(+) switch

    Smith, N. J., Hinley, J., Varley, C. L., Eardley, I., Trejdosiewicz, L. K. & Southgate, J., 14 Aug 2015

    Article in Bladder

  34. Plasmid carriage can limit bacteria-phage coevolution

    Harrison, E., Truman, J., Wright, R., Spiers, A. J., Paterson, S. & Brockhurst, M. A., 12 Aug 2015

    Article in Biology letters

  35. Coevolution can explain defensive secondary metabolite diversity in plants

    Speed, M. P., Fenton, A., Jones, M. G., Ruxton, G. D. & Brockhurst, M. A., 4 Aug 2015

    Article in The New phytologist

  36. Structural basis for DNA strand separation by a hexameric replicative helicase

    Chaban, Y., Stead, J. A., Ryzhenkova, K., Whelan, F., Lamber, E. P., Antson, A., Sanders, C. M. & Orlova, E. V., 3 Aug 2015

    Article in Nucleic Acids Research

  37. Modelling needle forces during insertion into soft tissue

    Cheng, Z., Chauhan, M., Davies, BL., Caldwell, DG. & Mattos, LS., 1 Aug 2015, 2015 37th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC). IEEE

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  38. Reassess the t test: Interact with all your data via ANOVA

    Brady, S. M., Burow, M., Busch, W., Carlborg, Õ., Denby, K. J., Glazebrook, J., Hamilton, E. S., Harmer, S. L., Haswell, E. S., Maloof, J. N., Springer, N. M. & Kliebenstein, D. J., 1 Aug 2015

    Article in The Plant Cell

  39. Removal and recovery of inhibitory volatile fatty acids from mixed acid fermentations by conventional electrodialysis

    Jones, R. J., Massanet-Nicolau, J., Guwy, A., Premier, G. C., Dinsdale, R. M. & Reilly, M., 1 Aug 2015

    Article in BIORESOURCE TECHNOLOGY

  40. GABAA receptor activity shapes the formation of inhibitory synapses between developing medium spiny neurons

    Arama, J., Abitbol, K., Goffin, D. L., Fuchs, C., Sihra, TS., Thomson, A. M. & Jovanovic, J. N., Aug 2015

    Article in Frontiers in Cellular Neuroscience

  41. Basigin is a druggable target for host-oriented antimalarial interventions.

    Zenonos, Z. A., Dummler, S. K., Müller-Sienerth, N., Chen, J., Preiser, P. R., Rayner, J. C. & Wright, G. J., 20 Jul 2015

    Article in The Journal of experimental medicine

  42. Morphinan biosynthesis in opium poppy requires a P450-oxidoreductase fusion protein

    Winzer, T. H., Kern, M. F., King, A. J., Larson, TR., Teodor, R. I., Donninger, S., Li, Y., Dowle, A., Cartwright, J., Bates, R., David, A., Thomas, J., Walker, C., Bowser, T. & Graham, I. A., 17 Jul 2015

    Article in Science

  43. The diversification of Heliconius butterflies: What have we learned in 150 years?

    Merrill, R. M., Dasmahapatra, K. K., Dell'Aglio, D. D., Hanly, J. J., Huber, B., Jiggins, C. D., Joron, M., Kozak, K. M., Llaurens, V., Martin, S. H., Montgomery, S. H., Morris, J., Nadeau, N. J., Pinharanda, A. L., Rosser, N., Thompson, M. J., Vanjari, S., Wallbank, R. W. R. & Yu, Q., 14 Jul 2015

    Article in Journal of evolutionary biology

  44. Effect of Brassica napus cultivar on cellulosic ethanol yield

    Wood, I. P., Wellner, N., Elliston, A., Wilson, D. R., Bancroft, I. & Waldron, K. W., 11 Jul 2015

    Article in Biotechnology for biofuels

  45. Immune response and insulin signalling alter mosquito feeding behaviour to enhance malaria transmission potential

    Cator, L. J., Pietri, J. E., Murdock, C. C., Ohm, J. R., Lewis, E. E., Read, A. F., Luckhart, S. & Thomas, M. B., 8 Jul 2015

    Article in Scientific Reports

  46. Flow Cytometry Methods and Approaches

    O'Toole, P. J. (ed.) & Davies, D. (ed.), 1 Jul 2015

    Special issue in Methods

  47. Navigating the labyrinth: a guide to sequence-based, community ecology of arbuscular mycorrhizal fungi

    Hart, M., Aleklett, K., Chagnon, P-L., Egan, C., Ghignone, S., Helgason, T., Lekberg, Y., Öpik, M., Pickles, B. & Waller, L., 1 Jul 2015

    Literature review in New Phytologist

  48. Quantification of proteins by flow cytometry: quantification of human hepatic transporter P-gp and OATP1B1 using flow cytometry and mass spectrometry

    Hogg, K., Thomas, J., Ashford, D. A., Cartwright, J., Coldwell, R., Weston, D. J., Pillmoor, J., Surry, D. & O'Toole, P. J., 1 Jul 2015

    Article in Methods

  49. Identification of a gene controlling variation in the salt tolerance of rapeseed (Brassica napus L.)

    Yong, H-Y., Wang, C., Bancroft, I., Li, F., Wu, X., Kitashiba, H. & Nishio, T., Jul 2015

    Article in Planta

  50. The adult murine heart has a sparse, phagocytically active macrophage population that expands through monocyte recruitment and adopts an 'M2' phenotype in response to Th2 immunologic challenge

    Mylonas, K. J., Jenkins, S. J., Castellan, R. F. P., Ruckerl, D., McGregor, K., Phythian-Adams, A. T., Hewitson, J. P., Campbell, S. M., MacDonald, A. S., Allen, J. E. & Gray, G. A., Jul 2015

    Article in Immunobiology

  51. The effectiveness of protected areas in the conservation of species with changing geographical ranges

    Gillingham, P. K., Bradbury, R. B., Roy, D. B., Anderson, B. J., Baxter, J. M., Bourn, N. A. D., Crick, H. Q. P., Findon, R. A., Fox, R., Franco, A., Hill, J. K., Hodgson, J. A., Holt, A. R., Morecroft, M. D., O'Hanlon, N. J., Oliver, T. H., Pearce-Higgins, J. W., Procter, D. A., Thomas, J. A., Walker, K. J. & 3 others, Walmsley, C. A., Wilson, R. J. & Thomas, C. D., Jul 2015

    Article in Biological Journal of the Linnean Society

  52. An atypical addition to the chemokine receptor nomenclature: IUPHAR Review 15

    Bachelerie, F., Graham, G. J., Locati, M., Mantovani, A., Murphy, P. M., Nibbs, R., Rot, A., Sozzani, S. & Thelen, M., 26 Jun 2015

    Article in BRITISH JOURNAL OF PHARMACOLOGY

  53. mVps45 knockdown selectively modulates VAMP expression in 3T3-L1 adipocytes

    Sadler, J. B. A., Roccisana, J., Virolainen, M., Bryant, N. J. & Gould, G. W., 24 Jun 2015

    Article in Communicative & integrative biology

  54. Collectivity in the light radon nuclei measured directly via Coulomb excitation

    Gaffney, L. P., Robinson, A. P., Jenkins, D. G., Andreyev, A. N., Bender, M., Blazhev, A., Bree, N., Bruyneel, B., Butler, P. A., Cocolios, T. E., Davinson, T., Deacon, A. N., De Witte, H., Dijulio, D., Diriken, J., Ekström, A., Fransen, C., Freeman, S. J., Geibel, K., Grahn, T. & 32 others, Hadinia, B., Hass, M., Heenen, P. H., Hess, H., Huyse, M., Jakobsson, U., Kesteloot, N., Konki, J., Kröll, T., Kumar, V., Ivanov, O., Martin-Haugh, S., Mücher, D., Orlandi, R., Pakarinen, J., Petts, A., Peura, P., Rahkila, P., Reiter, P., Scheck, M., Seidlitz, M., Singh, K., Smith, J. F., Van De Walle, J., Van Duppen, P., Voulot, D., Wadsworth, R., Warr, N., Wenander, F., Wimmer, K., Wrzosek-Lipska, K. & Zielińska, M., 22 Jun 2015

    Article in Physical Review C

  55. Supramolecular assemblies underpin turnover of outer membrane proteins in bacteria

    Rassam, P., Copeland, N. A., Birkholz, O., Tóth, C., Chavent, M., Duncan, A. L., Cross, S. J., Housden, N. G., Kaminska, R., Seger, U., Quinn, D. M., Garrod, T. J., Sansom, M. S. P., Piehler, J., Baumann, C. G. & Kleanthous, C., 10 Jun 2015, (E-pub ahead of print)

    Article in Nature

  56. Seedling development traits in Brassica napus examined by gene expression analysis and association mapping

    Körber, N., Bus, A., Li, J., Higgins, J., Bancroft, I., Higgins, E. E., Parkin, I. A. P., Salazar-Colqui, B., Snowdon, R. J. & Stich, B., 9 Jun 2015

    Article in BMC Plant Biology

  57. P-selectin is a host receptor for Plasmodium MSP7 ligands.

    Perrin, A. J., Bartholdson, S. J. & Wright, G. J., 5 Jun 2015

    Article in MALARIA JOURNAL

  58. Combined Single-Cell Functional and Gene Expression Analysis Resolves Heterogeneity within Stem Cell Populations

    Wilson, NK., Kent, DG., Buettner, F., Shehata, M., Macaulay, IC., Calero-Nieto, FJ., Sánchez Castillo, M., Oedekoven, CA., Diamanti, E., Schulte, R., Ponting, C. P., Voet, T., Caldas, C., Stingl, J., Green, A. R., Theis, F. J. & Gottgens, B., 4 Jun 2015

    Article in Cell Stem Cell

  59. Cooperative folding of intrinsically disordered domains drives assembly of a strong elongated protein

    Gruszka, D. T., Whelan, F., Farrance, O. E., Fung, H. K. H., Paci, E., Jeffries, C. M., Svergun, D. I., Baldock, C., Baumann, C. G., Brockwell, D. J., Potts, J. R. & Clarke, J., 1 Jun 2015

    Article in Nature Communications

  60. Coevolution with bacteriophages drives genome-wide host evolution and constrains the acquisition of abiotic-beneficial mutations

    Scanlan, P. D., Hall, A. R., Blackshields, G., Friman, V-P., Davis, M. R., Goldberg, J. B. & Buckling, A., Jun 2015

    Article in Molecular Biology and Evolution

  61. Insect life history and the evolution of bacterial mutualism

    Henry, L. M., Maiden, M. C. J., Ferrari, J. & Godfray, H. C. J., Jun 2015

    Article in Ecology Letters

  62. Organization of Subunits in the Membrane Domain of the Bovine F-ATPase Revealed by Covalent Cross-linking.

    Lee, J., Ding, S., Walpole, TB., Holding, AN., Montgomery, MG., Fearnley, IM. & Walker, JE., 22 May 2015

    Article in J Biol Chem

  63. Azasugar inhibitors as pharmacological chaperones for Krabbe disease

    Hill, C. H., Viuff, A. H., Spratley, S. J., Salamone, S., Christensen, S. H., Read, R. J., Moriarty, N. W., Jensen, H. H. & Deane, J. E., 20 May 2015

    Article in Chemical Science

  64. NMD3 regulates both mRNA and rRNA nuclear export in African trypanosomes via an XPOI-linked pathway

    Bühlmann, M., Walrad, P., Rico, E., Ivens, A., Capewell, P., Naguleswaran, A., Roditi, I. & Matthews, K. R., 19 May 2015

    Article in Nucleic Acids Research

  65. The evolution of prolonged life after reproduction

    Croft, D. P., Brent, L. J. N., Franks, D. W. & Cant, M. A., 14 May 2015

    Article in Trends in Ecology & Evolution

  66. Expression of fungal acetyl xylan esterase in Arabidopsis thaliana improves saccharification of stem lignocellulose.

    Pawar, P. M-A., Derba-Maceluch, M., Chong, S-L., Gomez, L. D., Miedes, E., Ratke, C., Gaertner, C., Mouille, G., McQueen Mason, S. J., Molina, A., Sellstedt, A., Tenkanen, M. & Mellerowicz, E., 11 May 2015

    Article in Plant biotechnology journal

  67. A Family of Tetraspans Organizes Cargo for Sorting into Multivesicular Bodies

    MacDonald, C., Payne, J. A., Aboian, M., Smith, W., Katzmann, D. J. & Piper, R. C., 4 May 2015

    Article in Developmental Cell

  68. Constructing random matrices to represent real ecosystems

    James, A., Plank, M. J., Rossberg, A. G., Beecham, J., Emmerson, M. & Pitchford, J. W., May 2015

    Article in The American Naturalist

  69. Marine systems biology

    Tonon, T. & Eveillard, D., May 2015

    Editorial in Frontiers in genetics

  70. Multilocus species trees show the recent adaptive radiation of the mimetic heliconius butterflies

    Kozak, K. M., Wahlberg, N., Neild, A. F. E., Dasmahapatra, K. K., Mallet, J. & Jiggins, C. D., May 2015

    Article in Systematic biology

  71. CIP2A is a candidate therapeutic target in clinically challenging prostate cancer cell populations

    Khanna, A., Rane, J. K., Kivinummi, K. K., Urbanucci, A., Helenius, M. A., Tolonen, T. T., Saramäki, O. R., Latonen, L., Manni, V., Pimanda, J. E., Maitland, N. J., Westermarck, J. & Visakorpi, T., 19 Apr 2015

    Article in Oncotarget

  72. miR-25 modulates invasiveness and dissemination of human prostate cancer cells via regulation of αv- and α6 integrin expression

    Zoni, E., van der Horst, G., van de Merbel, A. F., Chen, L., Rane, J. K., Pelger, R. C. M., Collins, A. T., Visakorpi, T., Snaar-Jagalska, B. E., Maitland, N. J. & van der Pluijm, G., 9 Apr 2015, (E-pub ahead of print)

    Article in Cancer research

  73. Climate, environmental and socio-economic change: Weighing up the balance in vector-borne disease transmission

    Parham, P. E., Waldock, J., Christophides, G. K., Hemming, D., Agusto, F., Evans, K. J., Fefferman, N., Gaff, H., Gumel, A., Ladeau, S., Lenhart, S., Mickens, R. E., Naumova, E. N., Ostfeld, R. S., Ready, P. D., Thomas, M. B., Velasco-Hernandez, J. & Michael, E., 5 Apr 2015

    Article in Philosophical Transactions of the Royal Society B: Biological Sciences

  74. SINE transcription by RNA polymerase III is suppressed by histone methylation but not by DNA methylation

    Varshney, D., Vavrova-Anderson, J., Oler, A. J., Cowling, V. H., Cairns, B. R. & White, R. J., 23 Mar 2015

    Article in Nature Communications

  75. Mechanistic rationale for MCL1 inhibition during androgen deprivation therapy

    Santer, F. R., Erb, H. H. H., Oh, S. J., Handle, F., Feiersinger, G. E., Luef, B., Bu, H., Schäfer, G., Ploner, C., Egger, M., Rane, J. K., Maitland, N. J., Klocker, H., Eder, I. E. & Culig, Z., 20 Mar 2015

    Article in Oncotarget

  76. Ecological Knowledge, Leadership, and the Evolution of Menopause in Killer Whales

    Brent, L. J. N., Franks, D. W., Foster, E. A., Balcomb, K. C., Cant, M. A. & Croft, D. P., 16 Mar 2015

    Article in Current Biology

  77. Concerted activity of IgG1 antibodies and IL-4/IL-25-dependent effector cells trap helminth larvae in the tissues following vaccination with defined secreted antigens, providing sterile immunity to challenge infection

    Hewitson, J. P., Filbey, K. J., Esser-von Bieren, J., Camberis, M., Schwartz, C., Murray, J., Reynolds, L. A., Blair, N., Robertson, E., Harcus, Y., Boon, L., Huang, S. C-C., Yang, L., Tu, Y., Miller, M. J., Voehringer, D., Le Gros, G., Harris, N. & Maizels, R. M., Mar 2015

    Article in PLOS PATHOGENS

  78. The GI-CDF module of Arabidopsis affects freezing tolerance and growth as well as flowering

    Fornara, F., de Montaigu, A., Sánchez-Villarreal, A., Takahashi, Y., Ver Loren van Themaat, E., Huettel, B., Davis, S. J. & Coupland, G., Mar 2015

    Article in The Plant journal

  79. Revealing the sequence and resulting cellular morphology of receptor-ligand interactions during Plasmodium falciparum invasion of erythrocytes

    Weiss, G. E., Gilson, P. R., Taechalertpaisarn, T., Tham, W-H., de Jong, N. W. M., Harvey, K. L., Fowkes, F. J. I., Barlow, P. N., Rayner, J. C., Wright, G. J., Cowman, A. F. & Crabb, B. S., 27 Feb 2015

    Article in PLOS PATHOGENS

  80. Quantification of Plasmodium-host protein interactions on intact, unmodified erythrocytes by back-scattering interferometry

    Saetear, P., Perrin, A. J., Bartholdson, S. J., Wanaguru, M., Kussrow, A., Bornhop, D. J. & Wright, G. J., 21 Feb 2015

    Article in MALARIA JOURNAL

  81. Monoclonal antibodies directed to fucoidan preparations from brown algae

    Torode, T. A., Marcus, S. E., Jam, M., Tonon, T., Blackburn, R. S., Hervé, C. & Knox, J. P., 18 Feb 2015

    Article in PLoS ONE

  82. Revealing the density of encoded functions in a viral RNA

    Patel, N., Dykeman, E. C., Coutts, R. H. A., Lomonossoff, G. P., Rowlands, D. J., Phillips, S. E. V., Ranson, N., Twarock, R., Tuma, R., Stockley, P. G. & Johnson, J. E. (ed.), 17 Feb 2015

    Article in Proceedings of the National Academy of Sciences of the United States of America

  83. Cortical lamina-dependent blood volume changes in human brain at 7 T

    Huber, L., Goense, J., Kennerley, A. J., Trampel, R., Guidi, M., Reimer, E., Ivanov, D., Neef, N., Gauthier, C. J., Turner, R. & Möller, H. E., 15 Feb 2015

    Article in Neuroimage

  84. Effect of mutation order on myeloproliferative neoplasms

    Ortmann, C. A., Kent, DG., Nangalia, J., Silber, Y., Wedge, D. C., Grinfeld, J., Baxter, E. J., Massie, C. E., Papaemmanuil, E., Menon, S., Godfrey, A. L., Dimitropoulou, D., Guglielmelli, P., Bellosillo, B., Besses, C., Dohner, K., Harrison, C. N., Vassiliou, G. S., Vannucchi, A., Campbell, P. J. & 1 others, Green, A. R., 12 Feb 2015

    Article in New England Journal of Medicine

  85. The genomic and phenotypic diversity of Schizosaccharomyces pombe

    Jeffares, D. C., Rallis, C., Rieux, A., Speed, D., Převorovský, M., Mourier, T., Marsellach, F. X., Iqbal, Z., Lau, W., Cheng, T. M. K., Pracana, R., Mülleder, M., Lawson, J. L. D., Chessel, A., Bala, S., Hellenthal, G., O'Fallon, B., Keane, T., Simpson, J. T., Bischof, L. & 22 others, Tomiczek, B., Bitton, D. A., Sideri, T., Codlin, S., Hellberg, J. E. E. U., Van Trigt, L., Jeffery, L., Li, J. J., Atkinson, S., Thodberg, M., Febrer, M., McLay, K., Drou, N., Brown, W., Hayles, J., Salas, R. E. C., Ralser, M., Maniatis, N., Balding, D. J., Balloux, F., Durbin, R. & Bähler, J., 9 Feb 2015

    Article in Nature genetics

  86. Genome expansion of Arabis alpina linked with retrotransposition and reduced symmetric DNA methylation

    Willing, E-M., Rawat, V., Mandáková, T., Maumus, F., Velikkakam James, G., Nordström, K. J. V., Becker, C., Warthmann, N., Chica, C., Szarzynska, B., Zytnicki, M., Albani, M. C., Kiefer, C., Bergonzi, S., Castaings, L., Mateos, J. L., Berns, M. C., Bujdoso, N., Piofczyk, T., Lorenzo, L. D. & 19 others, Barrero-Sicilia, C., Mateos, I., Piednoël, M., Hagmann, J., Chen-Min-Tao, R., Iglesias-Fernández, R., Schuster, S. C., Alonso-Blanco, C., Roudier, F., Carbonero, P., Paz-Ares, J., Davis, S. J., Pecinka, A., Quesneville, H., Colot, V., Lysak, M. A., Weigel, D., Coupland, G. & Schneeberger, K., 2 Feb 2015

    Article in Nature Plant

  87. One-pot triangular chemoenzymatic cascades for the syntheses of chiral alkaloids from dopamine

    Lichman, B. R., Lamming, E. D., Pesnot, T., Smith, J. M., Hailes, H. C. & Ward, J. M., 1 Feb 2015

    Article in Green Chemistry

  88. CCRL1/ACKR4 is expressed in key thymic microenvironments but is dispensable for T lymphopoiesis at steady state in adult mice

    Lucas, B., White, A. J., Ulvmar, M. H., Nibbs, R. J. B., Sitnik, K. M., Agace, W. W., Jenkinson, W. E., Anderson, G. & Rot, A., Feb 2015

    Article in European Journal of Immunology

  89. Dopamine-first mechanism enables the rational engineering of the norcoclaurine synthase aldehyde activity profile

    Lichman, B. R., Gershater, M. C., Lamming, E. D., Pesnot, T., Sula, A., Keep, N. H., Hailes, H. C. & Ward, J. M., 24 Jan 2015

    Article in FEBS Journal

  90. Ancient and modern environmental DNA

    Pedersen, M. W., Overballe-Petersen, S., Ermini, L., Der Sarkissian, C., Haile, J., Hellstrom, M., Spens, J., Thomsen, P. F., Bohmann, K., Cappellini, E., Schnell, I. B., Wales, N. A., Carøe, C., Campos, P. F., Schmidt, A. M. Z., Gilbert, M. T. P., Hansen, A. J., Orlando, L. & Willerslev, E., 19 Jan 2015

    Article in Philosophical Transactions Of The Royal Society Of London Series B - Biological Sciences

  91. Ancient genomics

    Der Sarkissian, C., Allentoft, M. E., Ávila-Arcos, M. C., Barnett, R., Campos, P. F., Cappellini, E., Ermini, L., Fernández, R., da Fonseca, R. A. R., Ginolhac, A., Hansen, A. J., Jónsson, H., Korneliussen, T. S., Margaryan, A., Martin, M. D., Víctor Moreno-Mayar, J., Raghavan, M., Rasmussen, M., Velasco, M. S., Schroeder, H. & 6 others, Schubert, M., Seguin-Orlando, A., Wales, N., Gilbert, M. T. P., Willerslev, E. & Orlando, L., 19 Jan 2015

    Article in Philosophical Transactions Of The Royal Society Of London Series B - Biological Sciences

  92. A PfRH5-based vaccine is efficacious against heterologous strain blood-stage Plasmodium falciparum infection in aotus monkeys

    Douglas, A. D., Baldeviano, G. C., Lucas, C. M., Lugo-Roman, L. A., Crosnier, C., Bartholdson, S. J., Diouf, A., Miura, K., Lambert, L. E., Ventocilla, J. A., Leiva, K. P., Milne, K. H., Illingworth, J. J., Spencer, A. J., Hjerrild, K. A., Alanine, D. G. W., Turner, A. V., Moorhead, J. T., Edgel, K. A., Wu, Y. & 4 others, Long, C. A., Wright, G. J., Lescano, A. G. & Draper, S. J., 14 Jan 2015

    Article in Cell Host & Microbe

  93. Ribose-5-phosphate Isomerase B Knockdown Compromises Trypanosoma brucei Bloodstream Form Infectivity

    Loureiro, I., Correia Faria, J. R., Clayton, C., Macedo Ribeiro, S., Santarem, N., Roy, N., Cordeiro-da-Silva, A. & Tavares, J., 8 Jan 2015

    Article in PLoS Neglected Tropical Diseases

  94. The origin and evolution of maize in the Southwestern United States

    da Fonseca, R. A. R., Smith, B. D., Wales, N., Cappellini, E., Skoglund, P., Fumagalli, M., Samaniego, J. A., Carøe, C., Ávila-Arcos, M. C., Hufnagel, D. E., Korneliussen, T. S., Vieira, F. G., Jakobsson, M., Arriaza, B., Willerslev, E., Nielsen, R., Hufford, M. B., Albrechtsen, A., Ross-Ibarra, J. & Gilbert, M. T. P., 8 Jan 2015

    Article in Nature Plants

  95. Estimation of the spontaneous mutation rate in Heliconius melpomene

    Keightley, P., Pinharanda, A., Ness, R., Simpson, F., Dasmahapatra, K. K., Mallet, J., Davey, J. W. & Jiggins, C. D., 1 Jan 2015

    Article in Molecular Biology and Evolution

  96. Residual biomass saccharification in processing tomato is affected by cultivar and nitrogen fertilization

    Ercolano, M. R., Gomez, L. D., Andolfi, A., Simister, R., Troise, C., Angelino, G., Borrelli, C., McQueen-Mason, S. J., Evidente, A., Frusciante, L. & Caruso, G., Jan 2015

    Article in Biomass & bioenergy

  97. Aberrant Phenotype in Human Endothelial Cells of Diabetic Origin: Implications for Saphenous Vein Graft Failure?

    Roberts, A. C., Gohil, J., Hudson, L., Connolly, K., Warburton, P., O'Toole, P. J., Suman, R., O'Regan, D. J., Turner, N. A., Riches, K. & Porter, K. E., 2015

    Article in Journal of Diabetes Research

  98. AnGeLi: A Tool for the Analysis of Gene Lists from Fission Yeast

    Bitton, D. A., Schubert, F., Dey, S., Okoniewski, M., Smith, G. C., Khadayate, S., Pancaldi, V., Wood, V. & Bähler, J., 2015

    Article in Frontiers in genetics

  99. Animal Social Networks

    Krause, J., James, R., Franks, D. W. & Croft, D. P., 2015, Oxford: Oxford University Press.

    Research output: Book/ReportBook

  100. Automated motion analysis of adherent cells in Monolayer culture

    Zhang, Z., Bedder, M., Smith, S. L., Walker, D., Shabir, S. & Southgate, J., 2015, Information Processing in Cells and Tissues: 10th International Conference, IPCAT 2015, San Diego, CA, USA, September 14-16, 2015, Proceedings. Lones, M., Tyrrell, A., Smith, S. & Fogel, G. (eds.). Springer-Verlag, Vol. 9303. p. 185-194 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 9303).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  101. Cooperation and Risk sharing in Public-private Partnerships for the management in invasive species

    Mato Amboage, R., Touza, J. M. & Pitchford, J., 2015, (Unpublished).

    Research output: Contribution to conferencePaperpeer-review

  102. Dynamics of copy number variation in host races of the pea aphid

    Duvaux, L., Geissmann, Q., Gharbi, K., Zhou, J-J., Ferrari, J., Smadja, C. M. & Butlin, R. K., 2015

    Article in Molecular Biology and Evolution

  103. Induction of proto-oncogene BRF2 in breast cancer cells by the dietary soybean isoflavone daidzein.

    Koo, J., Cabarcas-Petroski, S., Petrie, J., Diette, N., White, R. J. & Schramm, L., 2015

    Article in BMC Cancer

  104. Integrated Testing Strategies (ITS) for safety assessment

    Rovida, C., Alépée, N., Api, A. M., Basketter, D. A., Bois, F. Y., Caloni, F., Corsini, E., Daneshian, M., Eskes, C., Ezendam, J., Fuchs, H., Hayden, P., Hegele-Hartung, C., Hoffmann, S., Hubesch, B., Jacobs, M. N., Jaworska, J., Kleensang, A., Kleinstreuer, N., Lalko, J. & 16 others, Landsiedel, R., Lebreux, F., Luechtefeld, T., Locatelli, M., Mehling, A., Natsch, A., Pitchford, J. W., Prater, D., Prieto, P., Schepky, A., Schüürmann, G., Smirnova, L., Toole, C., van Vliet, E., Weisensee, D. & Hartung, T., 2015

    Article in ALTEX

  105. Selective repression of SINE transcription by RNA polymerase III.

    Varshney, D., Vavrova-Anderson, J., Oler, A. J., Cairns, B. R. & White, R. J., 2015

    Article in Mobile genetic elements

  106. Whole genome resequencing of Botrytis cinerea isolates identifies high levels of standing diversity

    Atwell, S., Corwin, J. A., Soltis, N. E., Subedy, A., Denby, K. J. & Kliebenstein, D. J., 2015

    Article in Frontiers in Microbiology

  107. klf2ash317 Mutant Zebrafish Do Not Recapitulate Morpholino-Induced Vascular and Haematopoietic Phenotypes

    Novodvorsky, P., Watson, O., Gray, C., Wilkinson, R. N., Reeve, S., Smythe, C., Beniston, R., Plant, K., Maguire, R., M K Rothman, A., Elworthy, S., van Eeden, F. J. M. & Chico, T. J. A., 2015

    Article in PLoS ONE