Search research publications and outputs

  1. A Family of Tetraspans Organizes Cargo for Sorting into Multivesicular Bodies

    MacDonald, C., Payne, J. A., Aboian, M., Smith, W., Katzmann, D. J. & Piper, R. C., 4 May 2015

    Article in Developmental Cell

  2. A PfRH5-based vaccine is efficacious against heterologous strain blood-stage Plasmodium falciparum infection in aotus monkeys

    Douglas, A. D., Baldeviano, G. C., Lucas, C. M., Lugo-Roman, L. A., Crosnier, C., Bartholdson, S. J., Diouf, A., Miura, K., Lambert, L. E., Ventocilla, J. A., Leiva, K. P., Milne, K. H., Illingworth, J. J., Spencer, A. J., Hjerrild, K. A., Alanine, D. G. W., Turner, A. V., Moorhead, J. T., Edgel, K. A., Wu, Y. & 4 others, Long, C. A., Wright, G. J., Lescano, A. G. & Draper, S. J., 14 Jan 2015

    Article in Cell Host & Microbe

  3. Aberrant Phenotype in Human Endothelial Cells of Diabetic Origin: Implications for Saphenous Vein Graft Failure?

    Roberts, A. C., Gohil, J., Hudson, L., Connolly, K., Warburton, P., O'Toole, P. J., Suman, R., O'Regan, D. J., Turner, N. A., Riches, K. & Porter, K. E., 2015

    Article in Journal of Diabetes Research

  4. Accumulation of cynaropicrin in globe artichoke and localization of enzymes involved in its biosynthesis

    Eljounaidi, K., Comino, C., Moglia, A., Cankar, K., Genre, A., Hehn, A., Bourgaud, F. & Beekwilder, J., 29 Jul 2015

    Article in Plant science

  5. Altering Transplantation Time to Avoid Periods of High Temperature Can Efficiently Reduce Bacterial Wilt Disease Incidence with Tomato

    Wei, Z., Huang, J. F., Hu, J., Gu, Y. A., Yang, C. L., Mei, X. L., Shen, Q. R., Xu, Y. C. & Friman, V. P., 6 Oct 2015

    Article in PLoS ONE

  6. An atypical addition to the chemokine receptor nomenclature: IUPHAR Review 15

    Bachelerie, F., Graham, G. J., Locati, M., Mantovani, A., Murphy, P. M., Nibbs, R., Rot, A., Sozzani, S. & Thelen, M., 26 Jun 2015

    Article in BRITISH JOURNAL OF PHARMACOLOGY

  7. AnGeLi: A Tool for the Analysis of Gene Lists from Fission Yeast

    Bitton, D. A., Schubert, F., Dey, S., Okoniewski, M., Smith, G. C., Khadayate, S., Pancaldi, V., Wood, V. & Bähler, J., 2015

    Article in Frontiers in genetics

  8. Ancient and modern environmental DNA

    Pedersen, M. W., Overballe-Petersen, S., Ermini, L., Der Sarkissian, C., Haile, J., Hellstrom, M., Spens, J., Thomsen, P. F., Bohmann, K., Cappellini, E., Schnell, I. B., Wales, N. A., Carøe, C., Campos, P. F., Schmidt, A. M. Z., Gilbert, M. T. P., Hansen, A. J., Orlando, L. & Willerslev, E., 19 Jan 2015

    Article in Philosophical Transactions Of The Royal Society Of London Series B - Biological Sciences

  9. Ancient genomics

    Der Sarkissian, C., Allentoft, M. E., Ávila-Arcos, M. C., Barnett, R., Campos, P. F., Cappellini, E., Ermini, L., Fernández, R., da Fonseca, R. A. R., Ginolhac, A., Hansen, A. J., Jónsson, H., Korneliussen, T. S., Margaryan, A., Martin, M. D., Víctor Moreno-Mayar, J., Raghavan, M., Rasmussen, M., Velasco, M. S., Schroeder, H. & 6 others, Schubert, M., Seguin-Orlando, A., Wales, N., Gilbert, M. T. P., Willerslev, E. & Orlando, L., 19 Jan 2015

    Article in Philosophical Transactions Of The Royal Society Of London Series B - Biological Sciences

  10. Ancient proteins resolve the evolutionary history of Darwin's South American ungulates

    Welker, F., Collins, M. J., Thomas, J. A., Wadsley, M., Brace, S., Cappellini, E., Turvey, S. T., Reguero, M., Gelfo, J. N., Kramarz, A., Burger, J., Thomas-Oates, J., Ashford, D. A., Ashton, P. D., Rowsell, K., Porter, D. M., Kessler, B., Fischer, R., Baessmann, C., Kaspar, S. & 11 others, Olsen, J. V., Kiley, P., Elliott, J. A., Kelstrup, C. D., Mullin, V., Hofreiter, M., Willerslev, E., Hublin, J. J., Orlando, L., Barnes, I. & Macphee, R. D. E., 4 Jun 2015

    Article in Nature

  11. Animal Social Networks

    Krause, J., James, R., Franks, D. W. & Croft, D. P., 2015, Oxford: Oxford University Press.

    Research output: Book/ReportBook

  12. Automated motion analysis of adherent cells in Monolayer culture

    Zhang, Z., Bedder, M., Smith, S. L., Walker, D., Shabir, S. & Southgate, J., 2015, Information Processing in Cells and Tissues: 10th International Conference, IPCAT 2015, San Diego, CA, USA, September 14-16, 2015, Proceedings. Lones, M., Tyrrell, A., Smith, S. & Fogel, G. (eds.). Springer-Verlag, Vol. 9303. p. 185-194 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 9303).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  13. Azasugar inhibitors as pharmacological chaperones for Krabbe disease

    Hill, C. H., Viuff, A. H., Spratley, S. J., Salamone, S., Christensen, S. H., Read, R. J., Moriarty, N. W., Jensen, H. H. & Deane, J. E., 20 May 2015

    Article in Chemical Science

  14. Bacterial genospecies that are not ecologically coherent: population genomics of Rhizobium leguminosarum

    Kumar, N., Lad, G., Giuntini, E., Kaye, M. E., Udomwong, P., Shamsani, N. J., Young, J. P. W. & Bailly, X., 14 Jan 2015

    Article in Open Biology

  15. Basigin is a druggable target for host-oriented antimalarial interventions.

    Zenonos, Z. A., Dummler, S. K., Müller-Sienerth, N., Chen, J., Preiser, P. R., Rayner, J. C. & Wright, G. J., 20 Jul 2015

    Article in The Journal of experimental medicine

  16. CCRL1/ACKR4 is expressed in key thymic microenvironments but is dispensable for T lymphopoiesis at steady state in adult mice

    Lucas, B., White, A. J., Ulvmar, M. H., Nibbs, R. J. B., Sitnik, K. M., Agace, W. W., Jenkinson, W. E., Anderson, G. & Rot, A., Feb 2015

    Article in European Journal of Immunology

  17. CIP2A is a candidate therapeutic target in clinically challenging prostate cancer cell populations

    Khanna, A., Rane, J. K., Kivinummi, K. K., Urbanucci, A., Helenius, M. A., Tolonen, T. T., Saramäki, O. R., Latonen, L., Manni, V., Pimanda, J. E., Maitland, N. J., Westermarck, J. & Visakorpi, T., 19 Apr 2015

    Article in Oncotarget

  18. CdiA promotes receptor-independent intercellular adhesion

    Ruhe, Z., Townsley, L., Wallace, A., King, A. D., Van Der Woude, M., Low, D. A., Yildiz, FH. & Hayes, CS., 25 Sep 2015

    Article in Molecular Microbiology

  19. Climate, environmental and socio-economic change: Weighing up the balance in vector-borne disease transmission

    Parham, P. E., Waldock, J., Christophides, G. K., Hemming, D., Agusto, F., Evans, K. J., Fefferman, N., Gaff, H., Gumel, A., Ladeau, S., Lenhart, S., Mickens, R. E., Naumova, E. N., Ostfeld, R. S., Ready, P. D., Thomas, M. B., Velasco-Hernandez, J. & Michael, E., 5 Apr 2015

    Article in Philosophical Transactions of the Royal Society B: Biological Sciences

  20. Coevolution can explain defensive secondary metabolite diversity in plants

    Speed, M. P., Fenton, A., Jones, M. G., Ruxton, G. D. & Brockhurst, M. A., 4 Aug 2015

    Article in The New phytologist

  21. Coevolution with bacteriophages drives genome-wide host evolution and constrains the acquisition of abiotic-beneficial mutations

    Scanlan, P. D., Hall, A. R., Blackshields, G., Friman, V-P., Davis, M. R., Goldberg, J. B. & Buckling, A., Jun 2015

    Article in Molecular Biology and Evolution

  22. Collectivity in the light radon nuclei measured directly via Coulomb excitation

    Gaffney, L. P., Robinson, A. P., Jenkins, D. G., Andreyev, A. N., Bender, M., Blazhev, A., Bree, N., Bruyneel, B., Butler, P. A., Cocolios, T. E., Davinson, T., Deacon, A. N., De Witte, H., Dijulio, D., Diriken, J., Ekström, A., Fransen, C., Freeman, S. J., Geibel, K., Grahn, T. & 32 others, Hadinia, B., Hass, M., Heenen, P. H., Hess, H., Huyse, M., Jakobsson, U., Kesteloot, N., Konki, J., Kröll, T., Kumar, V., Ivanov, O., Martin-Haugh, S., Mücher, D., Orlandi, R., Pakarinen, J., Petts, A., Peura, P., Rahkila, P., Reiter, P., Scheck, M., Seidlitz, M., Singh, K., Smith, J. F., Van De Walle, J., Van Duppen, P., Voulot, D., Wadsworth, R., Warr, N., Wenander, F., Wimmer, K., Wrzosek-Lipska, K. & Zielińska, M., 22 Jun 2015

    Article in Physical Review C

  23. Combined Single-Cell Functional and Gene Expression Analysis Resolves Heterogeneity within Stem Cell Populations

    Wilson, NK., Kent, DG., Buettner, F., Shehata, M., Macaulay, IC., Calero-Nieto, FJ., Sánchez Castillo, M., Oedekoven, CA., Diamanti, E., Schulte, R., Ponting, C. P., Voet, T., Caldas, C., Stingl, J., Green, A. R., Theis, F. J. & Gottgens, B., 4 Jun 2015

    Article in Cell Stem Cell

  24. Concerted activity of IgG1 antibodies and IL-4/IL-25-dependent effector cells trap helminth larvae in the tissues following vaccination with defined secreted antigens, providing sterile immunity to challenge infection

    Hewitson, J. P., Filbey, K. J., Esser-von Bieren, J., Camberis, M., Schwartz, C., Murray, J., Reynolds, L. A., Blair, N., Robertson, E., Harcus, Y., Boon, L., Huang, S. C-C., Yang, L., Tu, Y., Miller, M. J., Voehringer, D., Le Gros, G., Harris, N. & Maizels, R. M., Mar 2015

    Article in PLOS PATHOGENS

  25. Constructing random matrices to represent real ecosystems

    James, A., Plank, M. J., Rossberg, A. G., Beecham, J., Emmerson, M. & Pitchford, J. W., May 2015

    Article in The American Naturalist

  26. Cooperative folding of intrinsically disordered domains drives assembly of a strong elongated protein

    Gruszka, D. T., Whelan, F., Farrance, O. E., Fung, H. K. H., Paci, E., Jeffries, C. M., Svergun, D. I., Baldock, C., Baumann, C. G., Brockwell, D. J., Potts, J. R. & Clarke, J., 1 Jun 2015

    Article in Nature Communications

  27. Cortical lamina-dependent blood volume changes in human brain at 7 T

    Huber, L., Goense, J., Kennerley, A. J., Trampel, R., Guidi, M., Reimer, E., Ivanov, D., Neef, N., Gauthier, C. J., Turner, R. & Möller, H. E., 15 Feb 2015

    Article in Neuroimage

  28. Critical role of chlamydomonas reinhardtii ferredoxin-5 in maintaining membrane structure and dark metabolism

    Yang, W., Wittkopp, T. M., Li, X., Warakanont, J., Dubini, A., Catalanotti, C., Kim, R. G., Nowack, E. C. M., Mackinder, L. C. M., Aksoy, M., Page, M. D., D'Adamof, S., Saroussi, S., Heinnickel, M., Johnson, X., Richaud, P., Alric, J., Boehm, M., Jonikas, M. C., Benningh, C. & 3 others, Merchant, S. S., Posewitz, M. C. & Grossman, A. R., 1 Dec 2015

    Article in Proceedings of the National Academy of Sciences of the United States of America

  29. Crowding-Induced Hybridization of Single DNA Hairpins

    Baltierra-Jasso, L. E., Morten, M. J., Laflör, L., Quinn, S. D. & Magennis, S. W., 11 Dec 2015

    Article in Journal of the American Chemical Society

  30. Cytochrome c-based domain modularity governs genus-level diversification of electron transfer to dissimilatory nitrite reduction

    Aas, F. E., Li, X., Edwards, J., Hongrø Solbakken, M., Deeudom, M., Vik, Å., Moir, J., Koomey, M. & Aspholm, M., 11 Dec 2015

    Article in Environmental Microbiology

  31. Dopamine-first mechanism enables the rational engineering of the norcoclaurine synthase aldehyde activity profile

    Lichman, B. R., Gershater, M. C., Lamming, E. D., Pesnot, T., Sula, A., Keep, N. H., Hailes, H. C. & Ward, J. M., 24 Jan 2015

    Article in FEBS Journal

  32. Dynamics of copy number variation in host races of the pea aphid

    Duvaux, L., Geissmann, Q., Gharbi, K., Zhou, J-J., Ferrari, J., Smadja, C. M. & Butlin, R. K., 2015

    Article in Molecular Biology and Evolution

  33. Ecological Knowledge, Leadership, and the Evolution of Menopause in Killer Whales

    Brent, L. J. N., Franks, D. W., Foster, E. A., Balcomb, K. C., Cant, M. A. & Croft, D. P., 16 Mar 2015

    Article in Current Biology

  34. Effect of Brassica napus cultivar on cellulosic ethanol yield

    Wood, I. P., Wellner, N., Elliston, A., Wilson, D. R., Bancroft, I. & Waldron, K. W., 11 Jul 2015

    Article in Biotechnology for biofuels

  35. Effect of mutation order on myeloproliferative neoplasms

    Ortmann, C. A., Kent, DG., Nangalia, J., Silber, Y., Wedge, D. C., Grinfeld, J., Baxter, E. J., Massie, C. E., Papaemmanuil, E., Menon, S., Godfrey, A. L., Dimitropoulou, D., Guglielmelli, P., Bellosillo, B., Besses, C., Dohner, K., Harrison, C. N., Vassiliou, G. S., Vannucchi, A., Campbell, P. J. & 1 others, Green, A. R., 12 Feb 2015

    Article in New England Journal of Medicine

  36. Effects of N-Glycosylation Site Removal in Archaellins on the Assembly and Function of Archaella in Methanococcus maripaludis

    Ding, Y., Uchida, K., Aizawa, S-I., Murphy, K., Berezuk, A., Khursigara, C. M., Chong, J. P. J. & Jarrell, K. F., 20 Feb 2015

    Article in PLoS ONE

  37. Entomological Monitoring and Evaluation: Diverse Transmission Settings of ICEMR Projects Will Require Local and Regional Malaria Elimination Strategies

    Conn, J. E., Norris, D. E., Donnelly, M. J., Beebe, N. W., Burkot, T. R., Coulibaly, M. B., Chery, L., Eapen, A., Keven, J. B., Kilama, M., Kumar, A., Lindsay, S. W., Moreno, M., Quinones, M., Reimer, L. J., Russell, T. L., Smith, D. L., Thomas, M. B., Walker, E. D., Wilson, M. L. & 1 others, Yan, G., 1 Sep 2015

    Article in American journal of tropical medicine and hygiene

  38. Estimation of the spontaneous mutation rate in Heliconius melpomene

    Keightley, P., Pinharanda, A., Ness, R., Simpson, F., Dasmahapatra, K. K., Mallet, J., Davey, J. W. & Jiggins, C. D., 1 Jan 2015

    Article in Molecular Biology and Evolution

  39. Evolutionary resurrection of flagellar motility via rewiring of the nitrogen regulation system

    Taylor, T. B., Mulley, G., Dills, A. H., Alsohim, A. S., McGuffin, L. J., Studholme, D. J., Silby, M. W., Brockhurst, M. A., Johnson, L. J. & Jackson, R. W., 27 Feb 2015

    Article in Science

  40. Exploring the future land use-biodiversity-climate nexus in East Africa: an application of participatory scenario analysis

    Capitani, C., Norfolk, O., Platts, P. J., Burgess, N., Mukama, K., Malugu, I., Munishi, P. & Marchant, R., 21 Nov 2015, GLP News, 12, p. 10-13 4 p.

    Research output: Contribution to specialist publicationArticle

  41. Expression of fungal acetyl xylan esterase in Arabidopsis thaliana improves saccharification of stem lignocellulose.

    Pawar, P. M-A., Derba-Maceluch, M., Chong, S-L., Gomez, L. D., Miedes, E., Ratke, C., Gaertner, C., Mouille, G., McQueen Mason, S. J., Molina, A., Sellstedt, A., Tenkanen, M. & Mellerowicz, E., 11 May 2015

    Article in Plant biotechnology journal

  42. Flow Cytometry Methods and Approaches

    O'Toole, P. J. (ed.) & Davies, D. (ed.), 1 Jul 2015

    Special issue in Methods

  43. GABAA receptor activity shapes the formation of inhibitory synapses between developing medium spiny neurons

    Arama, J., Abitbol, K., Goffin, D. L., Fuchs, C., Sihra, TS., Thomson, A. M. & Jovanovic, J. N., Aug 2015

    Article in Frontiers in Cellular Neuroscience

  44. Genome expansion of Arabis alpina linked with retrotransposition and reduced symmetric DNA methylation

    Willing, E-M., Rawat, V., Mandáková, T., Maumus, F., Velikkakam James, G., Nordström, K. J. V., Becker, C., Warthmann, N., Chica, C., Szarzynska, B., Zytnicki, M., Albani, M. C., Kiefer, C., Bergonzi, S., Castaings, L., Mateos, J. L., Berns, M. C., Bujdoso, N., Piofczyk, T., Lorenzo, L. D. & 19 others, Barrero-Sicilia, C., Mateos, I., Piednoël, M., Hagmann, J., Chen-Min-Tao, R., Iglesias-Fernández, R., Schuster, S. C., Alonso-Blanco, C., Roudier, F., Carbonero, P., Paz-Ares, J., Davis, S. J., Pecinka, A., Quesneville, H., Colot, V., Lysak, M. A., Weigel, D., Coupland, G. & Schneeberger, K., 2 Feb 2015

    Article in Nature Plant

  45. Genome-wide analysis reveals the extent of EAV-HP integration in domestic chicken

    Wragg, D., Mason, A. S., Yu, L., Kuo, R., Lawal, R. A., Desta, T. T., Mwacharo, J. M., Cho, C-Y., Kemp, S., Burt, D. W. & Hanotte, O., 14 Oct 2015

    Article in BMC Genomics

  46. Hemiparasitic plant impacts animal and plant communities across four trophic levels

    Hartley, S. E., Green, J. P., Massey, F. P., Press, M. C. P., Stewart, A. J. A. & John, E. A., Sep 2015

    Article in Ecology

  47. Identification of QTL markers contributing to plant growth, oil yield and fatty acid composition in the oilseed crop Jatropha curcas L

    King, A. J., Montes, L., Clarke, J. G., Iztep, J., Perez, C. A. A., Jongschaap, R. E. E., Visser, R. G. F., van Loo, E. & Graham, I. A., 25 Sep 2015

    Article in Biotechnology for biofuels

  48. Identification of a gene controlling variation in the salt tolerance of rapeseed (Brassica napus L.)

    Yong, H-Y., Wang, C., Bancroft, I., Li, F., Wu, X., Kitashiba, H. & Nishio, T., Jul 2015

    Article in Planta

  49. Identification, evolution, and expression partitioning of miRNAs in allopolyploid Brassica napus

    Shen, E., Zou, J., Hubertus Behrens, F., Chen, L., Ye, C., Dai, S., Li, R., Ni, M., Jiang, X., Qiu, J., Liu, Y., Wang, W., Zhu, Q-H., Chalhoub, B., Bancroft, I., Meng, J., Cai, D. & Fan, L., 1 Dec 2015

    Article in Journal of Experimental Botany

  50. Immune response and insulin signalling alter mosquito feeding behaviour to enhance malaria transmission potential

    Cator, L. J., Pietri, J. E., Murdock, C. C., Ohm, J. R., Lewis, E. E., Read, A. F., Luckhart, S. & Thomas, M. B., 8 Jul 2015

    Article in Scientific Reports

  51. Index sorting resolves heterogeneous murine hematopoietic stem cell populations

    Schulte, R., Wilson, NK., Prick, JCM., Cossetti, C., Maj, MK., Gottgens, B. & Kent, DG., 1 Sep 2015

    Article in Experimental hematology

  52. Induction of proto-oncogene BRF2 in breast cancer cells by the dietary soybean isoflavone daidzein.

    Koo, J., Cabarcas-Petroski, S., Petrie, J., Diette, N., White, R. J. & Schramm, L., 2015

    Article in BMC Cancer

  53. Innovative Science: The London Times, Letter to the Editor

    Leake, M. C., 2015.

    Research output: Contribution to conferencePaper

  54. Insect life history and the evolution of bacterial mutualism

    Henry, L. M., Maiden, M. C. J., Ferrari, J. & Godfray, H. C. J., Jun 2015

    Article in Ecology Letters

  55. Integrated Testing Strategies (ITS) for safety assessment

    Rovida, C., Alépée, N., Api, A. M., Basketter, D. A., Bois, F. Y., Caloni, F., Corsini, E., Daneshian, M., Eskes, C., Ezendam, J., Fuchs, H., Hayden, P., Hegele-Hartung, C., Hoffmann, S., Hubesch, B., Jacobs, M. N., Jaworska, J., Kleensang, A., Kleinstreuer, N., Lalko, J. & 16 others, Landsiedel, R., Lebreux, F., Luechtefeld, T., Locatelli, M., Mehling, A., Natsch, A., Pitchford, J. W., Prater, D., Prieto, P., Schepky, A., Schüürmann, G., Smirnova, L., Toole, C., van Vliet, E., Weisensee, D. & Hartung, T., 2015

    Article in ALTEX

  56. Intrinsic challenges in ancient microbiome reconstruction using 16S rRNA gene amplification

    Ziesemer, K. A., Mann, A. E., Sankaranarayanan, K., Schroeder, H., Ozga, A. T., Brandt, B. W., Zaura, E., Waters-Rist, A., Hoogland, M., Salazar-García, D. C., Aldenderfer, M., Speller, C., Hendy, J., Weston, D. A., MacDonald, S. J., Thomas, G. H., Collins, M. J., Lewis, C. M., Hofman, C. & Warinner, C., 13 Nov 2015

    Article in Scientific Reports

  57. Jasmonate signalling drives time-of-day differences in susceptibility of Arabidopsis to the fungal pathogen Botrytis cinerea

    Ingle, R. A., Stoker, C., Stone, W., Adams, N., Smith, R., Grant, M., Carré, I., Roden, L. C. & Denby, K. J., 1 Dec 2015

    Article in Plant Journal

  58. Lignocellulose degradation mechanisms across the Tree of Life

    Cragg, S. M., Beckham, G. T., Bruce, N. C., Bugg, T. D. H., Distel, D. L., Dupree, P., Etxabe, A. G., Goodell, B. S., Jellison, J., McGeehan, J. E., McQueen-Mason, S. J., Schnorr, K., Walton, P. H., Watts, J. E. M. & Zimmer, M., Dec 2015

    Review article in Current Opinion in Chemical Biology

  59. M2 Polarization of Monocytes-Macrophages Is a Hallmark of Indian Post Kala-Azar Dermal Leishmaniasis

    Mukhopadhyay, D., Mukherjee, S., Roy, S., Dalton, J. E., Kundu, S., Sarkar, A., Das, N. K., Kaye, P. M. & Chatterjee, M., 23 Oct 2015

    Article in PLOS NEGLECTED TROPICAL DISEASES

  60. MIF interacts with CXCR7 to promote receptor internalization, ERK1/2 and ZAP-70 signaling, and lymphocyte chemotaxis

    Alampour-Rajabi, S., El Bounkari, O., Rot, A., Müller-Newen, G., Bachelerie, F., Gawaz, M., Weber, C., Schober, A. & Bernhagen, J., Nov 2015

    Article in The FASEB Journal

  61. Mapping long-range promoter contacts in human cells with high-resolution capture Hi-C

    Mifsud, B., Tavares-Cadete, F., Young, A. N., Sugar, R., Schoenfelder, S., Ferreira, L., Wingett, S. W., Andrews, S., Grey, W., Ewels, P. A., Herman, B., Happe, S., Higgs, A., Leproust, E., Follows, G. A., Fraser, P., Luscombe, N. M. & Osborne, C. S., 4 May 2015

    Article in Nature genetics

  62. Marine systems biology

    Tonon, T. & Eveillard, D., May 2015

    Editorial in Frontiers in genetics

  63. Mechanistic rationale for MCL1 inhibition during androgen deprivation therapy

    Santer, F. R., Erb, H. H. H., Oh, S. J., Handle, F., Feiersinger, G. E., Luef, B., Bu, H., Schäfer, G., Ploner, C., Egger, M., Rane, J. K., Maitland, N. J., Klocker, H., Eder, I. E. & Culig, Z., 20 Mar 2015

    Article in Oncotarget

  64. Modelling needle forces during insertion into soft tissue

    Cheng, Z., Chauhan, M., Davies, BL., Caldwell, DG. & Mattos, LS., 1 Aug 2015, 2015 37th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC). IEEE

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  65. Monoclonal antibodies directed to fucoidan preparations from brown algae

    Torode, T. A., Marcus, S. E., Jam, M., Tonon, T., Blackburn, R. S., Hervé, C. & Knox, J. P., 18 Feb 2015

    Article in PLoS ONE

  66. Morphinan biosynthesis in opium poppy requires a P450-oxidoreductase fusion protein

    Winzer, T. H., Kern, M. F., King, A. J., Larson, TR., Teodor, R. I., Donninger, S., Li, Y., Dowle, A., Cartwright, J., Bates, R., David, A., Thomas, J., Walker, C., Bowser, T. & Graham, I. A., 17 Jul 2015

    Article in Science

  67. Multilocus species trees show the recent adaptive radiation of the mimetic heliconius butterflies

    Kozak, K. M., Wahlberg, N., Neild, A. F. E., Dasmahapatra, K. K., Mallet, J. & Jiggins, C. D., May 2015

    Article in Systematic biology

  68. NLRP3 inflammasome activation downstream of cytoplasmic LPS recognition by both caspase-4 and caspase-5

    Baker, P. J., Boucher, D., Bierschenk, D., Tebartz, C., Whitney, P. G., D'Silva, D. B., Tanzer, M. C., Monteleone, M., Robertson, A. A. B., Cooper, M. A., Alvarez-Diaz, S., Herold, M. J., Bedoui, S., Schroder, K. & Masters, S. L., 6 Oct 2015

    Article in European Journal of Immunology

  69. NMD3 regulates both mRNA and rRNA nuclear export in African trypanosomes via an XPOI-linked pathway

    Bühlmann, M., Walrad, P., Rico, E., Ivens, A., Capewell, P., Naguleswaran, A., Roditi, I. & Matthews, K. R., 19 May 2015

    Article in Nucleic Acids Research

  70. Natural variants of ELF3 affect thermomorphogenesis by transcriptionally modulating PIF4-dependent auxin response genes

    Raschke, A., Ibañez, C., Ullrich, K. K., Anwer, M. U., Becker, S., Glöckner, A., Trenner, J., Denk, K., Saal, B., Sun, X., Ni, M., Davis, S. J., Delker, C. & Quint, M., 14 Aug 2015

    Article in BMC Plant Biology

  71. Navigating the labyrinth: a guide to sequence-based, community ecology of arbuscular mycorrhizal fungi

    Hart, M., Aleklett, K., Chagnon, P-L., Egan, C., Ghignone, S., Helgason, T., Lekberg, Y., Öpik, M., Pickles, B. & Waller, L., 1 Jul 2015

    Literature review in New Phytologist

  72. Neuronal-glial populations form functional networks in a biocompatible 3D scaffold

    Smith, I., Haag, M., Ugbode, C., Tams, D., Rattray, M., Przyborski, S., Bithell, A. & Whalley, B. J., 16 Nov 2015

    Article in NEUROSCIENCE LETTERS

  73. One-pot triangular chemoenzymatic cascades for the syntheses of chiral alkaloids from dopamine

    Lichman, B. R., Lamming, E. D., Pesnot, T., Smith, J. M., Hailes, H. C. & Ward, J. M., 1 Feb 2015

    Article in Green Chemistry

  74. Organization of Subunits in the Membrane Domain of the Bovine F-ATPase Revealed by Covalent Cross-linking.

    Lee, J., Ding, S., Walpole, TB., Holding, AN., Montgomery, MG., Fearnley, IM. & Walker, JE., 22 May 2015

    Article in J Biol Chem

  75. P-selectin is a host receptor for Plasmodium MSP7 ligands.

    Perrin, A. J., Bartholdson, S. J. & Wright, G. J., 5 Jun 2015

    Article in MALARIA JOURNAL

  76. Phytoplankton calcification as an effective mechanism to alleviate cellular calcium poisoning

    Müller, M. N., Barcelos E Ramos, J., Schulz, K. G., Riebesell, U., Kaźmierczak, J., Gallo, F., Mackinder, L., Li, Y., Nesterenko, P. N., Trull, T. W. & Hallegraeff, G. M., 13 Nov 2015

    Article in Biogeosciences

  77. Plasmid carriage can limit bacteria-phage coevolution

    Harrison, E., Truman, J., Wright, R., Spiers, A. J., Paterson, S. & Brockhurst, M. A., 12 Aug 2015

    Article in Biology letters

  78. Plasmonics, Tracking and Manipulating, and Living Cells: general discussion.

    Cordes, T., Moerner, W., Orrit, M., Sekatskii, S., Faez, S., Borri, P., Goswami, H. P., Clark, A., El-Khoury, P., Mayr, S., Mika, J., Lyu, G., Cross, D., Balzarotti, F., Langbein, W., Sandoghdar, V., Jens, M., Chowdhury, A., Meixner, A. J., van Hulst, N. & 7 others, Lounis, B., Stefani, F., Cichos, F., Dahan, M., Novotny, L., Leake, M. C. & Yang, H., 1 Dec 2015

    Article in FARADAY DISCUSSIONS

  79. Processing of Plasmodium falciparum Merozoite Surface Protein MSP1 Activates a Spectrin-Binding Function Enabling Parasite Egress from RBCs

    Das, S., Hertrich, N., Perrin, A. J., Withers-Martinez, C., Collins, C. R., Jones, M. L., Watermeyer, J. M., Fobes, E. T., Martin, S. R., Saibil, H. R., Wright, G. J., Treeck, M., Epp, C. & Blackman, M. J., 14 Oct 2015

    Article in Cell Host & Microbe

  80. Quantification of Plasmodium-host protein interactions on intact, unmodified erythrocytes by back-scattering interferometry

    Saetear, P., Perrin, A. J., Bartholdson, S. J., Wanaguru, M., Kussrow, A., Bornhop, D. J. & Wright, G. J., 21 Feb 2015

    Article in MALARIA JOURNAL

  81. Quantification of proteins by flow cytometry: quantification of human hepatic transporter P-gp and OATP1B1 using flow cytometry and mass spectrometry

    Hogg, K., Thomas, J., Ashford, D. A., Cartwright, J., Coldwell, R., Weston, D. J., Pillmoor, J., Surry, D. & O'Toole, P. J., 1 Jul 2015

    Article in Methods

  82. Reassess the t test: Interact with all your data via ANOVA

    Brady, S. M., Burow, M., Busch, W., Carlborg, Õ., Denby, K. J., Glazebrook, J., Hamilton, E. S., Harmer, S. L., Haswell, E. S., Maloof, J. N., Springer, N. M. & Kliebenstein, D. J., 1 Aug 2015

    Article in The Plant Cell

  83. Refugia and connectivity sustain amphibian metapopulations afflicted by disease

    Heard, G. W., Thomas, C. D., Hodgson, J. A., Scroggie, M. P., Ramsey, D. S. L. & Clemann, N., 14 Jul 2015

    Article in Ecology Letters

  84. Removal and recovery of inhibitory volatile fatty acids from mixed acid fermentations by conventional electrodialysis

    Jones, R. J., Massanet-Nicolau, J., Guwy, A., Premier, G. C., Dinsdale, R. M. & Reilly, M., 1 Aug 2015

    Article in BIORESOURCE TECHNOLOGY

  85. Residual biomass saccharification in processing tomato is affected by cultivar and nitrogen fertilization

    Ercolano, M. R., Gomez, L. D., Andolfi, A., Simister, R., Troise, C., Angelino, G., Borrelli, C., McQueen-Mason, S. J., Evidente, A., Frusciante, L. & Caruso, G., Jan 2015

    Article in Biomass & bioenergy

  86. Revealing the density of encoded functions in a viral RNA

    Patel, N., Dykeman, E. C., Coutts, R. H. A., Lomonossoff, G. P., Rowlands, D. J., Phillips, S. E. V., Ranson, N., Twarock, R., Tuma, R., Stockley, P. G. & Johnson, J. E. (ed.), 17 Feb 2015

    Article in Proceedings of the National Academy of Sciences of the United States of America

  87. Revealing the sequence and resulting cellular morphology of receptor-ligand interactions during Plasmodium falciparum invasion of erythrocytes

    Weiss, G. E., Gilson, P. R., Taechalertpaisarn, T., Tham, W-H., de Jong, N. W. M., Harvey, K. L., Fowkes, F. J. I., Barlow, P. N., Rayner, J. C., Wright, G. J., Cowman, A. F. & Crabb, B. S., 27 Feb 2015

    Article in PLOS PATHOGENS

  88. Rhamnolipid and surfactin production from olive oil mill waste as sole carbon source

    Moya Ramírez, I., Tsaousi, K., Rudden, M., Marchant, R., Jurado Alameda, E., García Román, M. & Banat, I. M., 1 Dec 2015

    Article in BIORESOURCE TECHNOLOGY

  89. Ribose-5-phosphate Isomerase B Knockdown Compromises Trypanosoma brucei Bloodstream Form Infectivity

    Loureiro, I., Correia Faria, J. R., Clayton, C., Macedo Ribeiro, S., Santarem, N., Roy, N., Cordeiro-da-Silva, A. & Tavares, J., 8 Jan 2015

    Article in PLoS Neglected Tropical Diseases

  90. SINE transcription by RNA polymerase III is suppressed by histone methylation but not by DNA methylation

    Varshney, D., Vavrova-Anderson, J., Oler, A. J., Cowling, V. H., Cairns, B. R. & White, R. J., 23 Mar 2015

    Article in Nature Communications

  91. Seedling development traits in Brassica napus examined by gene expression analysis and association mapping

    Körber, N., Bus, A., Li, J., Higgins, J., Bancroft, I., Higgins, E. E., Parkin, I. A. P., Salazar-Colqui, B., Snowdon, R. J. & Stich, B., 9 Jun 2015

    Article in BMC Plant Biology

  92. Selective repression of SINE transcription by RNA polymerase III.

    Varshney, D., Vavrova-Anderson, J., Oler, A. J., Cairns, B. R. & White, R. J., 2015

    Article in Mobile genetic elements

  93. Spatiotemporal trends of illegal activities from ranger-collected data in a Ugandan national park

    Critchlow, R., Plumptre, A. J., Driciru, M., Rwetsiba, A., Stokes, E. J., Tumwesigye, C., Wanyama, F. & Beale, C. M., 1 Oct 2015

    Article in Conservation Biology

  94. Standards for plant synthetic biology: A common syntax for exchange of DNA parts

    Patron, N. J., Orzaez, D., Marillonnet, S., Warzecha, H., Matthewman, C., Youles, M., Raitskin, O., Leveau, A., Farré, G., Rogers, C., Smith, A., Hibberd, J., Webb, A. A. R., Locke, J., Schornack, S., Ajioka, J., Baulcombe, D. C., Zipfel, C., Kamoun, S., Jones, J. D. G. & 38 others, Kuhn, H., Robatzek, S., Van Esse, H. P., Sanders, D., Oldroyd, G., Martin, C., Field, R., O'Connor, S., Fox, S., Wulff, B., Miller, B., Breakspear, A., Radhakrishnan, G., Delaux, P. M., Loqué, D., Granell, A., Tissier, A., Shih, P., Brutnell, T. P., Quick, W. P., Rischer, H., Fraser, P. D., Aharoni, A., Raines, C., South, P. F., Ané, J. M., Hamberger, B. R., Langdale, J., Stougaard, J., Bouwmeester, H., Udvardi, M., Murray, J. A. H., Ntoukakis, V., Schäfer, P., Denby, K., Edwards, K. J., Osbourn, A. & Haseloff, J., 1 Oct 2015

    Article in The New phytologist

  95. Structural basis for DNA strand separation by a hexameric replicative helicase

    Chaban, Y., Stead, J. A., Ryzhenkova, K., Whelan, F., Lamber, E. P., Antson, A., Sanders, C. M. & Orlova, E. V., 3 Aug 2015

    Article in Nucleic Acids Research

  96. Structures of archaeal DNA segregation machinery reveal bacterial and eukaryotic linkages

    Schumacher, M. A., Tonthat, N. K., Lee, J., Rodriguez-Castañeda, F. A., Chinnam, N. B., Kalliomaa-Sanford, A. K., Ng, I. W., Barge, M. T., Shaw, P. L. R. & Barillà, D., 4 Sep 2015

    Article in Science

  97. The GI-CDF module of Arabidopsis affects freezing tolerance and growth as well as flowering

    Fornara, F., de Montaigu, A., Sánchez-Villarreal, A., Takahashi, Y., Ver Loren van Themaat, E., Huettel, B., Davis, S. J. & Coupland, G., Mar 2015

    Article in The Plant journal

  98. The LRR receptor Islr2 is required for retinal axon routing at the vertebrate optic chiasm. Neural Development

    Panza, P., Sitko, A. A., Maischein, H-M., Koch, I., Flötenmeyer, M., Wright, G. J., Mandai, K., Mason, C. A. & Söllner, C., 22 Oct 2015

    Article in Neural Dev

  99. The adult murine heart has a sparse, phagocytically active macrophage population that expands through monocyte recruitment and adopts an 'M2' phenotype in response to Th2 immunologic challenge

    Mylonas, K. J., Jenkins, S. J., Castellan, R. F. P., Ruckerl, D., McGregor, K., Phythian-Adams, A. T., Hewitson, J. P., Campbell, S. M., MacDonald, A. S., Allen, J. E. & Gray, G. A., Jul 2015

    Article in Immunobiology

  100. The diversification of Heliconius butterflies: What have we learned in 150 years?

    Merrill, R. M., Dasmahapatra, K. K., Dell'Aglio, D. D., Hanly, J. J., Huber, B., Jiggins, C. D., Joron, M., Kozak, K. M., Llaurens, V., Martin, S. H., Montgomery, S. H., Morris, J., Nadeau, N. J., Pinharanda, A. L., Rosser, N., Thompson, M. J., Vanjari, S., Wallbank, R. W. R. & Yu, Q., 14 Jul 2015

    Article in Journal of evolutionary biology

  101. The effectiveness of protected areas in the conservation of species with changing geographical ranges

    Gillingham, P. K., Bradbury, R. B., Roy, D. B., Anderson, B. J., Baxter, J. M., Bourn, N. A. D., Crick, H. Q. P., Findon, R. A., Fox, R., Franco, A., Hill, J. K., Hodgson, J. A., Holt, A. R., Morecroft, M. D., O'Hanlon, N. J., Oliver, T. H., Pearce-Higgins, J. W., Procter, D. A., Thomas, J. A., Walker, K. J. & 3 others, Walmsley, C. A., Wilson, R. J. & Thomas, C. D., Jul 2015

    Article in Biological Journal of the Linnean Society

  102. The evolution of prolonged life after reproduction

    Croft, D. P., Brent, L. J. N., Franks, D. W. & Cant, M. A., 14 May 2015

    Article in Trends in Ecology & Evolution

  103. The genomic and phenotypic diversity of Schizosaccharomyces pombe

    Jeffares, D. C., Rallis, C., Rieux, A., Speed, D., Převorovský, M., Mourier, T., Marsellach, F. X., Iqbal, Z., Lau, W., Cheng, T. M. K., Pracana, R., Mülleder, M., Lawson, J. L. D., Chessel, A., Bala, S., Hellenthal, G., O'Fallon, B., Keane, T., Simpson, J. T., Bischof, L. & 22 others, Tomiczek, B., Bitton, D. A., Sideri, T., Codlin, S., Hellberg, J. E. E. U., Van Trigt, L., Jeffery, L., Li, J. J., Atkinson, S., Thodberg, M., Febrer, M., McLay, K., Drou, N., Brown, W., Hayles, J., Salas, R. E. C., Ralser, M., Maniatis, N., Balding, D. J., Balloux, F., Durbin, R. & Bähler, J., 9 Feb 2015

    Article in Nature genetics

  104. The human urothelial tight junction: claudin 3 and the ZO-1α(+) switch

    Smith, N. J., Hinley, J., Varley, C. L., Eardley, I., Trejdosiewicz, L. K. & Southgate, J., 14 Aug 2015

    Article in Bladder

  105. The origin and evolution of maize in the Southwestern United States

    da Fonseca, R. A. R., Smith, B. D., Wales, N., Cappellini, E., Skoglund, P., Fumagalli, M., Samaniego, J. A., Carøe, C., Ávila-Arcos, M. C., Hufnagel, D. E., Korneliussen, T. S., Vieira, F. G., Jakobsson, M., Arriaza, B., Willerslev, E., Nielsen, R., Hufford, M. B., Albrechtsen, A., Ross-Ibarra, J. & Gilbert, M. T. P., 8 Jan 2015

    Article in Nature Plants

  106. Transcriptional dynamics driving MAMP-triggered immunity and pathogen effector-mediated immunosuppression in Arabidopsis leaves following infection with Pseudomonas syringae pv tomato DC3000

    Lewis, L. A., Polanski, K., de Torres-Zabala, M., Jayaraman, S., Bowden, L., Moore, J., Penfold, C. A., Jenkins, D. J., Hill, C., Baxter, L., Kulasekaran, S., Truman, W., Littlejohn, G., Prusinska, J., Mead, A., Steinbrenner, J., Hickman, R., Rand, D., Wild, D. L., Ott, S. & 5 others, Buchanan-Wollaston, V., Smirnoff, N., Beynon, J., Denby, K. & Grant, M., 13 Nov 2015

    Article in The Plant Cell

  107. Type 3 innate lymphoid cells maintain intestinal epithelial stem cells after tissue damage

    Aparicio-Domingo, P., Romera-Hernandez, M., Karrich, J. J., Cornelissen, F., Papazian, N., Lindenbergh-Kortleve, D. J., Butler, J. A., Boon, L., Coles, M. C., Samsom, J. N. & Cupedo, T., 21 Sep 2015

    Article in The Journal of experimental medicine

  108. UDCA exerts beneficial effect on mitochondrial dysfunction in LRRK2G2019S carriers and in vivo

    Mortiboys, H., Furmston, R., Bronstad, G., Aasly, J., Elliott, C. & Bandmann, O., 8 Sep 2015

    Article in Neurology

  109. Vertebrate seed dispersers maintain the composition of tropical forest seedbanks

    Wandrag, E. M., Dunham, A. E., Miller, R. H. & Rogers, H. S., 16 Nov 2015

    Article in AoB Plants

  110. Whole genome resequencing of Botrytis cinerea isolates identifies high levels of standing diversity

    Atwell, S., Corwin, J. A., Soltis, N. E., Subedy, A., Denby, K. J. & Kliebenstein, D. J., 2015

    Article in Frontiers in Microbiology

  111. klf2ash317 Mutant Zebrafish Do Not Recapitulate Morpholino-Induced Vascular and Haematopoietic Phenotypes

    Novodvorsky, P., Watson, O., Gray, C., Wilkinson, R. N., Reeve, S., Smythe, C., Beniston, R., Plant, K., Maguire, R., M K Rothman, A., Elworthy, S., van Eeden, F. J. M. & Chico, T. J. A., 2015

    Article in PLoS ONE

  112. mVps45 knockdown selectively modulates VAMP expression in 3T3-L1 adipocytes

    Sadler, J. B. A., Roccisana, J., Virolainen, M., Bryant, N. J. & Gould, G. W., 24 Jun 2015

    Article in Communicative & integrative biology