Search research publications and outputs

  1. Understanding hematopoiesis from a single-cell standpoint.

    Kokkaliaris, KD., Lucas, D., Beerman, I., Kent, DG. & Perié, L., 1 Jun 2016

    Article in Experimental hematology

  2. Unanticipated Insights into Biomedicine from the Study of Acupuncture

    MacPherson, H., Hammerschlag, R., Coeytaux, R. R., Davis, R. T., Harris, R. E., Kong, J-T., Langevin, H. M., Lao, L., Milley, R. J., Napadow, V., Schnyer, R. N., Stener-Victorin, E., Witt, C. M. & Wayne, P. M., 3 Feb 2016

    Article in Journal of alternative and complementary medicine (New York, N.Y.)

  3. Time-series transcriptomics reveals that AGAMOUS-LIKE22 affects primary metabolism and developmental processes in drought-stressed arabidopsis

    Bechtold, U., Penfold, C. A., Jenkins, D. J., Legaie, R., Moore, J. D., Lawson, T., Matthews, J. S. A., Vialet-Chabrand, S. R. M., Baxter, L., Subramaniam, S., Hickman, R., Florance, H., Sambles, C., Salmon, D. L., Feil, R., Bowden, L., Hill, C., Baker, N. R., Lunn, J. E., Finkenstädt, B. & 9 others, Mead, A., Buchanan-Wollaston, V., Beynon, J., Rand, D. A., Wild, D. L., Denby, K. J., Ott, S., Smirnoff, N. & Mullineaux, P. M., 3 Feb 2016

    Article in The Plant Cell

  4. The structure of sperm Izumo1 reveals unexpected similarities with Plasmodium invasion proteins.

    Nishimura, K., Han, L., Bianchi, E., Wright, G. J., de Sanctis, D. & Jovine, L., 25 Jul 2016

    Article in Current Biology

  5. The significance of postreproductive lifespans in killer whales: a comment on Robeck et al

    Franks, D. W., Nattrass, S., Brent, L. J. N., Whitehead, H., Foote, A. D., Mazzi, S. V. T., Ford, J. K. B., Balcomb, K. C., Cant, M. A. & Croft, D. P., 8 Mar 2016

    Article in Journal of mammalogy

  6. The role of acroblast formation during Drosophila spermatogenesis

    Fari, K., Takacs, S., Ungar, D. & Sinka, R., 1 Aug 2016, (E-pub ahead of print)

    Article in Open Biology

  7. The mechanism of ϕC31 integrase directionality: experimental analysis and computational modelling

    Pokhilko, A., Zhao, J., Ebenhöh, O., Smith, M. C. M., Stark, W. M. & Colloms, S. D., 6 Sep 2016

    Article in Nucleic Acids Research

  8. The limits and potential of paleogenomic techniques for reconstructing grapevine domestication

    Wales, N., Ramos Madrigal, J., Cappellini, E., Carmona Baez, A., Samaniego Castruita, J. A., Romero-Navarro, J. A., Carøe, C., Ávila-Arcos, M. C., Peñaloza, F., Moreno-Mayar, J. V., Gasparyan, B., Zardaryan, D., Bagoyan, T., Smith, A., Pinhasi, R., Bosi, G., Fiorentino, G., Grasso, A. M., Celant, A., Bar-Oz, G. & 7 others, Tepper, Y., Hall, A., Scalabrin, S., Miculan, M., Morgante, M., Di Gaspero, G. & Gilbert, M. T. P., 1 Aug 2016

    Article in Journal of archaeological science

  9. The heat shock response plays an important role in TDP-43 clearance: evidence for dysfunction in amyotrophic lateral sclerosis

    Chen, H-J., Mitchell, J. C., Novoselov, S. S., Miller, J. W., Nishimura, A., Scotter, E. L., Vance, C. A., Cheetham, M. E. & Shaw, C. E. D., 1 May 2016

    Article in Brain

  10. The genome of the seagrass Zostera marina reveals angiosperm adaptation to the sea

    Olsen, J. L., Rouzé, P., Verhelst, B., Lin, Y-C., Bayer, T., Collen, J., Dattolo, E., De Paoli, E., Dittami, S., Maumus, F., Michel, G., Kersting, A., Lauritano, C., Lohaus, R., Töpel, M., Tonon, T., Vanneste, K., Amirebrahimi, M., Brakel, J., Boström, C. & 15 others, Chovatia, M., Grimwood, J., Jenkins, J. W., Jueterbock, A., Mraz, A., Stam, W. T., Tice, H., Bornberg-Bauer, E., Green, P. J., Pearson, G. A., Procaccini, G., Duarte, C. M., Schmutz, J., Reusch, T. B. H. & Van de Peer, Y., 27 Jan 2016, (E-pub ahead of print)

    Article in Nature

  11. The breakdown of stored triacylglycerols is required during light-induced stomatal opening

    McLachlan, D. H., Lan, J., Geilfus, C-M., Dodd, A. N., Larson, TR., Baker, A., Horak, H., Kollist, H., He, Z., Graham, I. A., Mickelbart, M. V. & Hetherington, A. M., 7 Mar 2016

    Article in Current Biology

  12. The anti-sigma factor RsrA responds to oxidative stress by reburying its hydrophobic core

    Rajasekar, K. V., Zdanowski, K., Yan, J., Hopper, J. T. S., Francis, M-L. R., Seepersad, C., Sharp, C., Pecqueur, L., Werner, J. M., Robinson, C. V., Mohammed, S., Potts, J. R. & Kleanthous, C., 19 Jul 2016

    Article in Nature Communications

  13. The RET E616Q variant is a gain of function mutation present in a family with features of multiple endocrine neoplasia 2A. Endocrine Pathology

    Grey, W. G., Hulse, R., Yakovleva, A., Genkova, D., Whitelaw, B., Solomon, E., Diaz-Cano, S. J. & Izatt, L., 5 Oct 2016

    Article in Endocrine Pathology

  14. The International Decision Support Initiative Reference Case for Economic Evaluation: An Aid to Thought

    Wilkinson, T., Sculpher, M. J., Claxton, K., Revill, P., Briggs, A., Cairns, J. A., Teerawattananon, Y., Asfaw, E., Lopert, R., Culyer, A. J. & Walker, D. G., Dec 2016

    Article in Value in Health

  15. The C-terminal region of Trypanosoma cruzi MASPs is antigenic and secreted via exovesicles.

    De Pablos Torro, L. M., Diaz Lozano, I. M., Jercic, M. I., Quinzada, M., Giménez, M. J., Calabuig, E., Espino, A. M., Schijman, A. G., Zulantay, I., Apt, W. & Osuna, A., 8 Jun 2016

    Article in Scientific Reports

  16. Tetramerization and interdomain flexibility of the replication initiation controller YabA enables simultaneous binding to multiple partners

    Felicori, L., Jameson, K. H., Roblin, P., Fogg, M. J., Garcia-Garcia, T., Ventroux, M., Cherrier, M. V., Bazin, A., Noirot, P., Wilkinson, A. J., Molina, F., Terradot, L. & Noirot-Gros, M. F., 8 Jan 2016

    Article in Nucleic Acids Research

  17. Temperate phages both mediate and drive adaptive evolution in pathogen biofilms

    Davies, E. V., James, C. E., Williams, D., O'Brien, S., Fothergill, J. L., Haldenby, S., Paterson, S., Brockhurst, M. A. & Winstanley, C., 5 Jul 2016

    Article in Proceedings of the National Academy of Sciences of the United States of America

  18. Tbet or Continued RORγt Expression Is Not Required for Th17-Associated Immunopathology

    Brucklacher-Waldert, V., Ferreira, C., Innocentin, S., Kamdar, S., Withers, D. R., Kullberg, M. C. & Veldhoen, M., 15 Jun 2016

    Article in Journal of Immunology

  19. Tanzania's reptile biodiversity: Distribution, threats and climate change vulnerability

    Meng, H., Carr, J., Beraducci, J., Bowles, P., Branch, W., Capitani, C., Chenga, J., Cox, N., Howell, K., Malonza, P., Marchant, R., Mbilinyi, B., Mukama, K., Msuya, C., Platts, P. J., Safari, I., Spawls, S., Shennan-Farpon, Y., Wagner, P. & Burgess, N., 1 Dec 2016

    Article in Biological Conservation

  20. TWIST1 Integrates Endothelial Responses to Flow in Vascular Dysfunction and Atherosclerosis

    Mahmoud, M. M., Kim, H. R., Xing, R., Hsiao, S., Mammoto, A., Chen, J., Serbanovic-Canic, J., Feng, S., Bowden, N. P., Maguire, R., Ariaans, M., Francis, S. E., Weinberg, P. D., van der Heiden, K., Jones, E. A., Chico, T. J. A., Ridger, V. & Evans, P. C., 22 Jul 2016

    Article in Circulation Research

  21. Surface Charge Control of Quantum Dot Blinking

    Quinn, S. D., Rafferty, A., Dick, E., Morten, M. J., Kettles, F. J., Knox, C., Murrie, M. & Magennis, S. W., 1 Sep 2016

    Article in Journal of Physical Chemistry C

  22. Spotsizer: High-throughput quantitative analysis of microbial growth

    Bischof, L., Prěvorovský, M., Rallis, C., Jeffares, D. C., Arzhaeva, Y. & Bähler, J., Oct 2016

    Article in Biotechniques

  23. Spatial structure arising from neighbour-dependent bias in collective cell movement

    Binny, R. N., Haridas, P., James, A., Law, R., Simpson, M. J. & Plank, M. J., 15 Feb 2016

    Article in PeerJ

  24. Single-Molecule Fluorescence Detection of a Synthetic Heparan Sulfate Disaccharide

    Dalton, C. E., Quinn, S. D., Rafferty, A., Morten, M. J., Gardiner, J. M. & Magennis, S. W., 4 Nov 2016

    Article in ChemPhysChem

  25. Silk route to the acceptance and re-implementation of bacteriophage therapy

    Expert round table on acceptance and re-implementation of bacteriophage therapy, 28 Apr 2016

    Article in Biotechnology journal

  26. Shell evolution approaching the N=20 island of inversion: Structure of 26Na

    Wilson, G. L., Catford, W. N., Orr, N. A., Diget, C. A., Matta, A., Hackman, G., Williams, S. J., Celik, I. C., Achouri, N. L., Al Falou, H., Ashley, R., Austin, R. A. E., Ball, G. C., Blackmon, J. C., Boston, A. J., Boston, H. C., Brown, S. M., Cross, D. S., Djongolov, M., Drake, T. E. & 19 others, Hager, U., Fox, S. P., Fulton, B. R., Galinski, N., Garnsworthy, A. B., Jamieson, D., Kanungo, R., Leach, K. G., Orce, J. N., Pearson, C. J., Porter-Peden, M., Sarazin, F., Simpson, E. C., Sjue, S., Smalley, D., Sumithrarachchi, C., Triambak, S., Unsworth, C. & Wadsworth, R., 10 Aug 2016

    Article in Physics Letters B

  27. Selected Schizosaccharomyces pombe strains have characteristics that are beneficial for winemaking

    Benito, Á., Jeffares, D., Palomero, F., Calderón, F., Bai, F. Y., Bähler, J. & Benito, S., 1 Mar 2016

    Article in PLoS ONE

  28. Root morphology and seed and leaf ionomic traits in a Brassica napus L. diversity panel show wide phenotypic variation and are characteristic of crop habit

    Thomas, C. L., Alcock, T. D., Graham, N. S., Hayden, R., Matterson, S., Wilson, L., Young, S. D., Dupuy, L. X., White, P. J., Hammond, J. P., Danku, J. M. C., Salt, D. E., Sweeney, A. G., Bancroft, I. & Broadley, M. R., 4 Oct 2016

    Article in BMC Plant Biology

  29. Recent results in nuclear astrophysics at the n-TOF facility at CERN

    Tagliente, G., Aberle, O., Andrzejewski, J., Audouin, L., Bacak, M., Balibrea-Correa, J., Barbagallo, M., Bečváf, F., Berthoumieux, E., Billowes, J., Bosnar, D., Brown, A., Caamaño, M., Calviño, F., Calviani, M., Cano-Ott, D., Cardella, R., Casanovas, A., Cerutti, F., Chiaveri, E. & 96 others, Colonna, N., Cortés, G., Cortés-Giraldo, M. A., Cosentino, C., Damone, L. A., Diakaki, M., Domingo-Pardo, C., Dressler, L. R., Dupont, E., Durán, I., Fernández-Domínguez, B., Ferrari, A. C., Ferreira, P. R., Finocchiaro, P., Furman, V., Göbel, K., García, A. R., Gawlik, A., Gilardoni, S., Glodariu, T., Gonçalves, I. F., González-Romero, E., Griesmayer, E., Guerrero, C., Gunsing, F., Harada, H., Heinitz, S., Heyse, J., Jenkins, D. G., Jericha, E., Käppeler, F., Kadi, Y., Kalamara, A., Kavrigin, P., Kimura, A., Kivel, N., Kokkoris, M., Krtička, M., Kurtulgil, D., Leal-Cidoncha, E., Lederer, C., Lerendegui-Marco, J., Leeb, H., Lo Meo, S., Lonsdale, S. J., Macina, D., Marganiec, J., Martínez, T., Masi, A., Massimi, C., Mastinu, P. F., Mastromarco, M., Maugeri, E. A., Mazzone, A., Mendoza, E., Mengoni, A., Mingrone, F., Milazzo, P. M., Musumarra, A., Negret, A., Nolte, R., Oprea, A., Patronis, N., Pavlik, A., Perkowski, J., Porras, I., Praena, J., Quesada, J. M., Radeck, D., Rauscher, T., Reifarth, R., Rubbia, C., Ryan, J. A., Sabaté-Gilarte, M., Saxena, A. K., Schillebeeckx, P., Schumann, D., Sedyshev, P., Smith, A. G., Sosnin, N. V., Stamatopoulos, A., Tain, J. L., Tarifeño-Saldivia, A., Tassan-Got, L., Valenta, S., Vannini, G., Variale, V., Vaz, P., Ventura, A., Vlachoudis, V., Vlastou, R., Wallner, A., Warren, S., Woods, P. J., Wright, T. & Zugec, P., 2016

    Article in Proceedings of Science

  30. Rapid evolution of microbe-mediated protection against pathogens in a worm host

    King, K. C., Brockhurst, M. A., Vasieva, O., Paterson, S., Betts, A., Ford, S. A., Frost, C. L., Horsburgh, M. J., Haldenby, S. & Hurst, G. DD., 15 Mar 2016

    Article in The ISME Journal

  31. Rapid dissemination of human T-lymphotropic virus type 1 during primary infection in transplant recipients

    Cook, L., Melamed, A., Demontis, M. A., Laydon, D., Fox, J. M., Tosswill, J., de Freitas, D., Price, A., Medcalf, J., Martin, F., Neuberger, J., Bangham, C. & Taylor, G., 8 Jan 2016

    Article in Retrovirology

  32. Protein sequences bound to mineral surfaces persist into deep time

    Demarchi, B., Hall, S., Roncal-Herrero, T., Freeman, C., Woolley, J., Crisp, M. K., Wilson, J. C., Fotakis, A., Fischer, R., Kessler, B., Rakownikow Jersie-Christensen, R., Olsen, J., Haile, J., Thomas, J., Marean, C., Parkington, J., Presslee, S. L., Lee-Thorp, J., Ditchfield, P., Hamilton, J. F. & 16 others, Ward, M. W., Wang, C. M., Shaw, M. D., Harrison, T., Dominguez-Rodrigo, M., MacPhee, R., Kwekason, A., Ecker, M., Kolska Horwitz, L., Chazan, M., Kröger, R., Thomas-Oates, J. E., Harding, J., Cappellini, E., Penkman, K. E. H. & Collins, M. J., 27 Sep 2016

    Article in eLife

  33. Proteasome inhibition for treatment of leishmaniasis, Chagas disease and sleeping sickness

    Khare, S., Nagle, A. S., Biggart, A., Lai, Y. H., Liang, F., Davis, L. C., Barnes, S. W., Mathison, C. J. N., Myburgh, E., Gao, M-Y., Gillespie, J. R., Liu, X., Tan, J. L., Stinson, M., Rivera, I. C., Ballard, J., Yeh, V., Groessl, T., Federe, G., Koh, H. X. Y. & 15 others, Venable, J. D., Bursulaya, B., Shapiro, M., Mishra, P. K., Spraggon, G., Brock, A., Mottram, J. C., Buckner, F. S., Rao, S. P. S., Wen, B. G., Walker, J. R., Tuntland, T., Molteni, V., Glynne, R. J. & Supek, F., 8 Sep 2016

    Article in Nature

  34. Probiotic diversity enhances rhizosphere microbiome function and plant disease suppression

    HU, J., Wei, Z., Friman, V-P., Gu, S., Wang, X., Eisenhauer, N., Yang, T., Ma, J., Shen, Q., Xu, Y. & Jousset, A., 13 Dec 2016

    Article in MBio

  35. Principles Governing the Self-Assembly of Coiled-Coil Protein Nanoparticles

    Indelicato, G., Wahome, N., Ringler, P., Müller, S. A., Nieh, M-P., Burkhard, P. & Twarock, R., 2 Feb 2016

    Article in Biophysical Journal

  36. Predicting educational achievement from DNA

    Selzam, S., Krapohl, E., Von Stumm, S., O'Reilly, P. F., Rimfeld, K., Kovas, Y., Dale, P. S., Lee, J. J. & Plomin, R., 19 Jul 2016, (E-pub ahead of print)

    Article in Molecular psychiatry

  37. Phytochromes function as thermosensors in Arabidopsis

    Jung, J-H., Domijan, M., Klose, C., Biswas, S., Ezer, D., Gao, M., Khattak, A. K., Box, M. S., Charoensawan, V., Cortijo, S., Kumar, M., Grant, A., Locke, J. C. W., Schäfer, E., Jaeger, K. E. & Wigge, P. A., 18 Nov 2016

    Article in Science

  38. Pathogen invasion indirectly changes the composition of soil microbiome via shifts in root exudation profile

    Gu, Y., Wei, Z., Wang, X., Friman, V-P., Huang, J., Wang, X., Mei, X., Xu, Y., Shen, Q. & Jousset, A., 27 Jul 2016, (E-pub ahead of print)

    Article in Biology and fertility of soils

  39. Parasites and competitors suppress bacterial pathogen synergistically due to evolutionary trade-offs

    Wang, X., Wei, Z., Li, M., Wang, X., Shan, A., Mei, X., Jousset, A., Shen, Q., Xu, Y. & Friman, V-P., 27 Dec 2016, (E-pub ahead of print)

    Article in Evolution

  40. PNT1 is a C11 Cysteine Peptidase Essential for Replication of the Trypanosome Kinetoplast.

    Grewal, J., McLuskey, K., Das, D., Myburgh, E., Wilkes, J., Brown, E., Lemgruber, L., Gould, M. K., Burchmore, R. J., Coombs, G. H., Schnaufer, A. & Mottram, J. C., 29 Apr 2016

    Article in Journal of Biological Chemistry

  41. Overhead tank is the potential breeding habitat of Anopheles stephensi in an urban transmission setting of Chennai, India

    Thomas, S., Ravishankaran, S., Justin, J. A., Asokan, A., Mathai, M. T., Valecha, N., Thomas, M. B. & Eapen, A., 11 May 2016, (E-pub ahead of print)

    Article in MALARIA JOURNAL

  42. Novel O-linked methylated glycan antigens decorate secreted immunodominant glycoproteins from the intestinal nematode Heligmosomoides polygyrus

    Hewitson, J. P., Nguyen, D. L., van Diepen, A., Smit, C. H., Koeleman, C. A., McSorley, H. J., Murray, J., Maizels, R. M. & Hokke, C. H., Mar 2016

    Article in International Journal for Parasitology

  43. New frontiers in belowground ecology for plant protection from root-feeding insects

    Johnson, S. N., Benefer, C. M., Frew, A., Griffiths, B. S., Hartley, S. E., Karley, A. J., Schumann, M., Sonnemann, I. & Robert, C. A. M., Dec 2016

    Article in Applied Soil Ecology

  44. Morphology-Specific Inhibition of β-Amyloid Aggregates by 17β-Hydroxysteroid Dehydrogenase Type 10

    Aitken, L., Quinn, S. D., Perez-Gonzalez, C., Samuel, I. D. W., Penedo, J. C. & Gunn-Moore, F. J., 2 Jun 2016

    Article in Chembiochem

  45. Molecular architecture of the complete COG tethering complex

    Ha, J. Y., Chou, H-T., Ungar, D., Yip, C. K., Walz, T. & Hughson, F. M., 18 Jul 2016

    Article in Nature Structural & Molecular Biology

  46. Molecular Mechanisms of Disease Pathogenesis Differ in Krabbe Disease Variants

    Spratley, S. J., Hill, C. H., Viuff, A. H., Edgar, J. R., Skjødt, K. & Deane, J. E., 1 Aug 2016

    Article in Traffic

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