Search research publications and outputs

  1. 2016
  2. Probiotic diversity enhances rhizosphere microbiome function and plant disease suppression

    HU, J., Wei, Z., Friman, V-P., Gu, S., Wang, X., Eisenhauer, N., Yang, T., Ma, J., Shen, Q., Xu, Y. & Jousset, A., 13 Dec 2016

    Article in MBio

  3. Evaluation of Antigens for Development of a Serological Test for Human African Trypanosomiasis

    Biéler, S., Waltenberger, H., Barrett, M. P., McCulloch, R., Mottram, J. C., Carrington, M., Schwaeble, W., McKerrow, J., Phillips, M. A., Michels, P. A., Büscher, P., Sanchez, J-C., Bishop, R., Robinson, D. R., Bangs, J., Ferguson, M., Nerima, B., Albertini, A., Michel, G., Radwandska, M. & 1 others, Ndung'u, J. M., 9 Dec 2016

    Article in PLoS ONE

  4. Malaria parasite CelTOS targets the inner leaflet of cell membranes for pore- dependent disruption

    Jimah, J. R., Salinas, N. D., Sala-rabanal, M., Jones, N. G., Sibley, L. D., Nichols, C. G., Schlesinger, P. H. & Tolia, N. H., 1 Dec 2016

    Article in eLife

  5. Tanzania's reptile biodiversity: Distribution, threats and climate change vulnerability

    Meng, H., Carr, J., Beraducci, J., Bowles, P., Branch, W., Capitani, C., Chenga, J., Cox, N., Howell, K., Malonza, P., Marchant, R., Mbilinyi, B., Mukama, K., Msuya, C., Platts, P. J., Safari, I., Spawls, S., Shennan-Farpon, Y., Wagner, P. & Burgess, N., 1 Dec 2016

    Article in Biological Conservation

  6. Does cooperation mean kinship between spatially discrete ant nests?

    Procter, D., Cottrell, J., Watts, K., A'Hara, S., Hofreiter, M. & Robinson, E. J. H., Dec 2016

    Article in Ecology and Evolution

  7. New frontiers in belowground ecology for plant protection from root-feeding insects

    Johnson, S. N., Benefer, C. M., Frew, A., Griffiths, B. S., Hartley, S. E., Karley, A. J., Schumann, M., Sonnemann, I. & Robert, C. A. M., Dec 2016

    Article in Applied Soil Ecology

  8. The International Decision Support Initiative Reference Case for Economic Evaluation: An Aid to Thought

    Wilkinson, T., Sculpher, M. J., Claxton, K., Revill, P., Briggs, A., Cairns, J. A., Teerawattananon, Y., Asfaw, E., Lopert, R., Culyer, A. J. & Walker, D. G., Dec 2016

    Article in Value in Health

  9. Light-sensing phytochromes feel the heat

    Davis, S. J. & Halliday, K. J., 18 Nov 2016

    Article in Science

  10. Phytochromes function as thermosensors in Arabidopsis

    Jung, J-H., Domijan, M., Klose, C., Biswas, S., Ezer, D., Gao, M., Khattak, A. K., Box, M. S., Charoensawan, V., Cortijo, S., Kumar, M., Grant, A., Locke, J. C. W., Schäfer, E., Jaeger, K. E. & Wigge, P. A., 18 Nov 2016

    Article in Science

  11. EphrinB1/EphB3b Coordinate Bidirectional Epithelial-Mesenchymal Interactions Controlling Liver Morphogenesis and Laterality

    Cayuso, J., Dzementsei, A., Fischer, J. C., Karemore, G., Caviglia, S., Bartholdson, J., Wright, G. J. & Ober, E. A., 7 Nov 2016

    Article in Developmental Cell

  12. Single-Molecule Fluorescence Detection of a Synthetic Heparan Sulfate Disaccharide

    Dalton, C. E., Quinn, S. D., Rafferty, A., Morten, M. J., Gardiner, J. M. & Magennis, S. W., 4 Nov 2016

    Article in ChemPhysChem

  13. Identification of novel regulators of developmental hematopoiesis using Endoglin regulatory elements as molecular probes.

    Nasrallah, R., Fast, EM., Solaimani, P., Knezevic, K., Eliades, A., Patel, R., Thambyrajah, R., Unnikrishnan, A., Thoms, J., Beck, D., Vink, C. S., Smith, A., Wong, J., Shepherd, M. S., Kent, D. G., Roychoudhuri, R., Paul, F., Klippert, J., Hammes, A., Willnow, T. & 6 others, Göttgens, B., Dzierzak, E., Zon, L. I., Lacaud, G., Kouskoff, V. & Pimanda, J. E., 13 Oct 2016

    Article in Blood

  14. The RET E616Q variant is a gain of function mutation present in a family with features of multiple endocrine neoplasia 2A. Endocrine Pathology

    Grey, W. G., Hulse, R., Yakovleva, A., Genkova, D., Whitelaw, B., Solomon, E., Diaz-Cano, S. J. & Izatt, L., 5 Oct 2016

    Article in Endocrine Pathology

  15. Root morphology and seed and leaf ionomic traits in a Brassica napus L. diversity panel show wide phenotypic variation and are characteristic of crop habit

    Thomas, C. L., Alcock, T. D., Graham, N. S., Hayden, R., Matterson, S., Wilson, L., Young, S. D., Dupuy, L. X., White, P. J., Hammond, J. P., Danku, J. M. C., Salt, D. E., Sweeney, A. G., Bancroft, I. & Broadley, M. R., 4 Oct 2016

    Article in BMC Plant Biology

  16. Bone marrow-derived and resident liver macrophages display unique transcriptomic signatures but similar biological functions

    Beattie, L., Sawtell, A. K., Mann, J., Frame, T. C. M., Teal, B., de Labastida Rivera, F., Brown, N., Walwyn-Brown, K., Moore, J. W. J., MacDonald, A. J., Lim, E-K., Dalton, J. E., Engwerda, C. R., MacDonald, K. P. & Kaye, P., 1 Oct 2016

    Article in Journal of Hepatology

  17. Spotsizer: High-throughput quantitative analysis of microbial growth

    Bischof, L., Prěvorovský, M., Rallis, C., Jeffares, D. C., Arzhaeva, Y. & Bähler, J., Oct 2016

    Article in Biotechniques

  18. Protein sequences bound to mineral surfaces persist into deep time

    Demarchi, B., Hall, S., Roncal-Herrero, T., Freeman, C., Woolley, J., Crisp, M. K., Wilson, J. C., Fotakis, A., Fischer, R., Kessler, B., Rakownikow Jersie-Christensen, R., Olsen, J., Haile, J., Thomas, J., Marean, C., Parkington, J., Presslee, S. L., Lee-Thorp, J., Ditchfield, P., Hamilton, J. F. & 16 others, Ward, M. W., Wang, C. M., Shaw, M. D., Harrison, T., Dominguez-Rodrigo, M., MacPhee, R., Kwekason, A., Ecker, M., Kolska Horwitz, L., Chazan, M., Kröger, R., Thomas-Oates, J. E., Harding, J., Cappellini, E., Penkman, K. E. H. & Collins, M. J., 27 Sep 2016

    Article in eLife

  19. DRI-Grass: a new experimental platform for addressing grassland ecosystem responses to future precipitation scenarios in south-east Australia

    Power, S. A., Barnett, K., Ochoa-Hueso, R., Facey, S. L., Gibson-Forty, E. V. J., Hartley, S. E., Nielsen, U. N., Tissue, D. T. & Johnson, S. N., 20 Sep 2016

    Article in Frontiers in Plant Science

  20. Differential gene expression according to race and host plant in the pea aphid

    Eyres, I., Jaquiéry, J., Sugio, A., Duvaux, L., Gharbi, K., Zhou, J-J., Legeai, F., Nelson, M., Simon, J-C., Smadja, C. M., Butlin, R. & Ferrari, J., 12 Sep 2016

    Article in Molecular Ecology

  21. Proteasome inhibition for treatment of leishmaniasis, Chagas disease and sleeping sickness

    Khare, S., Nagle, A. S., Biggart, A., Lai, Y. H., Liang, F., Davis, L. C., Barnes, S. W., Mathison, C. J. N., Myburgh, E., Gao, M-Y., Gillespie, J. R., Liu, X., Tan, J. L., Stinson, M., Rivera, I. C., Ballard, J., Yeh, V., Groessl, T., Federe, G., Koh, H. X. Y. & 15 others, Venable, J. D., Bursulaya, B., Shapiro, M., Mishra, P. K., Spraggon, G., Brock, A., Mottram, J. C., Buckner, F. S., Rao, S. P. S., Wen, B. G., Walker, J. R., Tuntland, T., Molteni, V., Glynne, R. J. & Supek, F., 8 Sep 2016

    Article in Nature

  22. The mechanism of ϕC31 integrase directionality: experimental analysis and computational modelling

    Pokhilko, A., Zhao, J., Ebenhöh, O., Smith, M. C. M., Stark, W. M. & Colloms, S. D., 6 Sep 2016

    Article in Nucleic Acids Research

  23. Human migration activities drive the fluctuation of ARGs: Case study of landfills in Nanjing, eastern China

    Sun, M., Ye, M., Schwab, A. P., Li, X., Wan, J., Wei, Z., Wu, J., Friman, V-P., Liu, K., Tian, D., Liu, M., Li, H., Hu, F. & Jiang, X., 5 Sep 2016

    Article in Journal of hazardous materials

  24. A conceptual view at microtubule plus end dynamics in neuronal axons

    Voelzmann, A., Hahn, I., Pearce, S. P., Sánchez-Soriano, N. & Prokop, A., 1 Sep 2016

    Article in Brain research bulletin

  25. Surface Charge Control of Quantum Dot Blinking

    Quinn, S. D., Rafferty, A., Dick, E., Morten, M. J., Kettles, F. J., Knox, C., Murrie, M. & Magennis, S. W., 1 Sep 2016

    Article in Journal of Physical Chemistry C

  26. Characterising rhamnolipid production in Burkholderia thailandensis E264, a non-pathogenic producer

    Funston, S. J., Tsaousi, K., Rudden, M., Smyth, T. J., Stevenson, P. S., Marchant, R. & Banat, I. M., Sep 2016

    Article in APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

  27. A new look at the LTR retrotransposon content of the chicken genome

    Mason, A. S., Fulton, J. E., Hocking, P. M. & Burt, D. W., 30 Aug 2016

    Article in BMC Genomics

  28. A single-cell resolution map of mouse hematopoietic stem and progenitor cell differentiation.

    Nestorowa, S., Hamey, FK., Pijuan Sala, B., Diamanti, E., Shepherd, M. S., Laurenti, E., Wilson, NK., Kent, DG. & Göttgens, B., 25 Aug 2016

    Article in Blood

  29. Landscape effects on the spread of invasive species

    O’Reilly-Nugent, A., Palit, R., Lopez-Aldana, A., Medina-Romero, M., Wandrag, E. & Duncan, R. P., 12 Aug 2016

    Article in Current Landscape Ecology Reports

  30. Shell evolution approaching the N=20 island of inversion: Structure of 26Na

    Wilson, G. L., Catford, W. N., Orr, N. A., Diget, C. A., Matta, A., Hackman, G., Williams, S. J., Celik, I. C., Achouri, N. L., Al Falou, H., Ashley, R., Austin, R. A. E., Ball, G. C., Blackmon, J. C., Boston, A. J., Boston, H. C., Brown, S. M., Cross, D. S., Djongolov, M., Drake, T. E. & 19 others, Hager, U., Fox, S. P., Fulton, B. R., Galinski, N., Garnsworthy, A. B., Jamieson, D., Kanungo, R., Leach, K. G., Orce, J. N., Pearson, C. J., Porter-Peden, M., Sarazin, F., Simpson, E. C., Sjue, S., Smalley, D., Sumithrarachchi, C., Triambak, S., Unsworth, C. & Wadsworth, R., 10 Aug 2016

    Article in Physics Letters B

  31. Cooperation of imipramine blue and tyrosine kinase blockade demonstrates activity against chronic myeloid leukemia

    Laidlaw, K. M. E., Berhan, S., Liu, S., Silvestri, G., Holyoake, T. L., Frank, D. A., Aggarwal, B., Bonner, M. Y., Perrotti, D., Jørgensen, H. G. & Arbiser, J. L., 9 Aug 2016

    Article in Oncotarget

  32. Molecular Mechanisms of Disease Pathogenesis Differ in Krabbe Disease Variants

    Spratley, S. J., Hill, C. H., Viuff, A. H., Edgar, J. R., Skjødt, K. & Deane, J. E., 1 Aug 2016

    Article in Traffic

  33. The limits and potential of paleogenomic techniques for reconstructing grapevine domestication

    Wales, N., Ramos Madrigal, J., Cappellini, E., Carmona Baez, A., Samaniego Castruita, J. A., Romero-Navarro, J. A., Carøe, C., Ávila-Arcos, M. C., Peñaloza, F., Moreno-Mayar, J. V., Gasparyan, B., Zardaryan, D., Bagoyan, T., Smith, A., Pinhasi, R., Bosi, G., Fiorentino, G., Grasso, A. M., Celant, A., Bar-Oz, G. & 7 others, Tepper, Y., Hall, A., Scalabrin, S., Miculan, M., Morgante, M., Di Gaspero, G. & Gilbert, M. T. P., 1 Aug 2016

    Article in Journal of archaeological science

  34. The structure of sperm Izumo1 reveals unexpected similarities with Plasmodium invasion proteins.

    Nishimura, K., Han, L., Bianchi, E., Wright, G. J., de Sanctis, D. & Jovine, L., 25 Jul 2016

    Article in Current Biology

  35. TWIST1 Integrates Endothelial Responses to Flow in Vascular Dysfunction and Atherosclerosis

    Mahmoud, M. M., Kim, H. R., Xing, R., Hsiao, S., Mammoto, A., Chen, J., Serbanovic-Canic, J., Feng, S., Bowden, N. P., Maguire, R., Ariaans, M., Francis, S. E., Weinberg, P. D., van der Heiden, K., Jones, E. A., Chico, T. J. A., Ridger, V. & Evans, P. C., 22 Jul 2016

    Article in Circulation Research

  36. Allosteric Regulation of Fibronectin/α5β1 Interaction by Fibronectin-Binding MSCRAMMs

    Liang, X., Garcia, B. L., Visai, L., Prabhakaran, S., Meenan, N. A. G., Potts, J. R., Humphries, M. J. & Höök, M., 19 Jul 2016

    Article in PLoS ONE

  37. The anti-sigma factor RsrA responds to oxidative stress by reburying its hydrophobic core

    Rajasekar, K. V., Zdanowski, K., Yan, J., Hopper, J. T. S., Francis, M-L. R., Seepersad, C., Sharp, C., Pecqueur, L., Werner, J. M., Robinson, C. V., Mohammed, S., Potts, J. R. & Kleanthous, C., 19 Jul 2016

    Article in Nature Communications

  38. Molecular architecture of the complete COG tethering complex

    Ha, J. Y., Chou, H-T., Ungar, D., Yip, C. K., Walz, T. & Hughson, F. M., 18 Jul 2016

    Article in Nature Structural & Molecular Biology

  39. From local scenarios to national maps: a participatory framework for envisioning the future of Tanzania

    Capitani, C., Mukama, K., Mbilinyi, B., Malugu, I., Munishi, P., Burgess, N. D., Platts, P. J., Sallu, S. & Marchant, R., 14 Jul 2016

    Article in Ecology and Society

  40. Linkage Mapping of Stem Saccharification Digestibility in Rice

    Liu, B., Gómez, L. D., Hua, C., Sun, L., Ali, I., Huang, L., Yu, C., Simister, R., Steele-King, C., Gan, Y. & McQueen-Mason, S. J., 12 Jul 2016

    Article in PLoS ONE

  41. Global threat to agriculture from invasive species

    Paini, D. R., Sheppard, A. W., Cook, D. C., De Barro, P. J., Worner, S. P. & Thomas, M. B., 5 Jul 2016

    Article in Proceedings of the National Academy of Sciences of the United States of America

  42. Temperate phages both mediate and drive adaptive evolution in pathogen biofilms

    Davies, E. V., James, C. E., Williams, D., O'Brien, S., Fothergill, J. L., Haldenby, S., Paterson, S., Brockhurst, M. A. & Winstanley, C., 5 Jul 2016

    Article in Proceedings of the National Academy of Sciences of the United States of America

  43. Binding of Plasmodium falciparum Merozoite Surface Proteins DBLMSP and DBLMSP2 to Human Immunoglobulin M Is Conserved among Broadly Diverged Sequence Variants.

    Crosnier, C., Iqbal, Z., Knuepfer, E., Maciuca, S., Perrin, A. J., Kamuyu, G., Goulding, D., Bustamante, L. Y., Miles, A., Moore, S. C., Dougan, G., Holder, A. A., Kwiatkowski, D. P., Rayner, J. C., Pleass, R. J. & Wright, G. J., 1 Jul 2016

    Article in The Journal of biological chemistry

  44. Decline of a rare moth at its last known English site: causes and lessons for conservation

    Baker, D., Barrett, S., Beale, C. M., Crawford, T. J., Ellis, S., Gullett, T., Mayhew, P. J., Parsons, M. S., Relf, P., Robertson, P., Small, J. & Wainwright, D., 22 Jun 2016

    Article in PLoS ONE

  45. Tbet or Continued RORγt Expression Is Not Required for Th17-Associated Immunopathology

    Brucklacher-Waldert, V., Ferreira, C., Innocentin, S., Kamdar, S., Withers, D. R., Kullberg, M. C. & Veldhoen, M., 15 Jun 2016

    Article in Journal of Immunology

  46. Laboratory analogue of a supersonic accretion column in a binary star system

    Cross, J. E., Gregori, G., Foster, J. M., Graham, P., Bonnet-Bidaud, J. M., Busschaert, C., Charpentier, N., Danson, C. N., Doyle, H. W., Drake, R. P., Fyrth, J., Gumbrell, E. T., Koenig, M., Krauland, C., Kuranz, C. C., Loupias, B., Michaut, C., Mouchet, M., Patankar, S., Skidmore, J. & 5 others, Spindloe, C., Tubman, E. R., Woolsey, N., Yurchak, R. & Falize, E., 13 Jun 2016

    Article in Nature Communications

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