Search research publications and outputs

  1. 2016
  2. Probiotic diversity enhances rhizosphere microbiome function and plant disease suppression

    HU, J., Wei, Z., Friman, V-P., Gu, S., Wang, X., Eisenhauer, N., Yang, T., Ma, J., Shen, Q., Xu, Y. & Jousset, A., 13 Dec 2016

    Article in MBio

  3. Evaluation of Antigens for Development of a Serological Test for Human African Trypanosomiasis

    Biéler, S., Waltenberger, H., Barrett, M. P., McCulloch, R., Mottram, J. C., Carrington, M., Schwaeble, W., McKerrow, J., Phillips, M. A., Michels, P. A., Büscher, P., Sanchez, J-C., Bishop, R., Robinson, D. R., Bangs, J., Ferguson, M., Nerima, B., Albertini, A., Michel, G., Radwandska, M. & 1 others, Ndung'u, J. M., 9 Dec 2016

    Article in PLoS ONE

  4. Malaria parasite CelTOS targets the inner leaflet of cell membranes for pore- dependent disruption

    Jimah, J. R., Salinas, N. D., Sala-rabanal, M., Jones, N. G., Sibley, L. D., Nichols, C. G., Schlesinger, P. H. & Tolia, N. H., 1 Dec 2016

    Article in eLife

  5. Tanzania's reptile biodiversity: Distribution, threats and climate change vulnerability

    Meng, H., Carr, J., Beraducci, J., Bowles, P., Branch, W., Capitani, C., Chenga, J., Cox, N., Howell, K., Malonza, P., Marchant, R., Mbilinyi, B., Mukama, K., Msuya, C., Platts, P. J., Safari, I., Spawls, S., Shennan-Farpon, Y., Wagner, P. & Burgess, N., 1 Dec 2016

    Article in Biological Conservation

  6. Does cooperation mean kinship between spatially discrete ant nests?

    Procter, D., Cottrell, J., Watts, K., A'Hara, S., Hofreiter, M. & Robinson, E. J. H., Dec 2016

    Article in Ecology and Evolution

  7. Longitudinal imaging of the ageing mouse

    Dall'Ara, E., Boudiffa, M., Taylor, C., Schug, D., Fiegle, E., Kennerley, A. J., Damianou, C., Tozer, G. M., Kiessling, F. & Müller, R., Dec 2016

    Review article in Mechanisms of ageing and development

  8. New frontiers in belowground ecology for plant protection from root-feeding insects

    Johnson, S. N., Benefer, C. M., Frew, A., Griffiths, B. S., Hartley, S. E., Karley, A. J., Schumann, M., Sonnemann, I. & Robert, C. A. M., Dec 2016

    Article in Applied Soil Ecology

  9. The International Decision Support Initiative Reference Case for Economic Evaluation: An Aid to Thought

    Wilkinson, T., Sculpher, M. J., Claxton, K., Revill, P., Briggs, A., Cairns, J. A., Teerawattananon, Y., Asfaw, E., Lopert, R., Culyer, A. J. & Walker, D. G., Dec 2016

    Article in Value in Health

  10. Light-sensing phytochromes feel the heat

    Davis, S. J. & Halliday, K. J., 18 Nov 2016

    Article in Science

  11. EphrinB1/EphB3b Coordinate Bidirectional Epithelial-Mesenchymal Interactions Controlling Liver Morphogenesis and Laterality

    Cayuso, J., Dzementsei, A., Fischer, J. C., Karemore, G., Caviglia, S., Bartholdson, J., Wright, G. J. & Ober, E. A., 7 Nov 2016

    Article in Developmental Cell

  12. Single-Molecule Fluorescence Detection of a Synthetic Heparan Sulfate Disaccharide

    Dalton, C. E., Quinn, S. D., Rafferty, A., Morten, M. J., Gardiner, J. M. & Magennis, S. W., 4 Nov 2016

    Article in ChemPhysChem

  13. Root morphology and seed and leaf ionomic traits in a Brassica napus L. diversity panel show wide phenotypic variation and are characteristic of crop habit

    Thomas, C. L., Alcock, T. D., Graham, N. S., Hayden, R., Matterson, S., Wilson, L., Young, S. D., Dupuy, L. X., White, P. J., Hammond, J. P., Danku, J. M. C., Salt, D. E., Sweeney, A. G., Bancroft, I. & Broadley, M. R., 4 Oct 2016

    Article in BMC Plant Biology

  14. Bone marrow-derived and resident liver macrophages display unique transcriptomic signatures but similar biological functions

    Beattie, L., Sawtell, A. K., Mann, J., Frame, T. C. M., Teal, B., de Labastida Rivera, F., Brown, N., Walwyn-Brown, K., Moore, J. W. J., MacDonald, A. J., Lim, E-K., Dalton, J. E., Engwerda, C. R., MacDonald, K. P. & Kaye, P., 1 Oct 2016

    Article in Journal of Hepatology

  15. Protein sequences bound to mineral surfaces persist into deep time

    Demarchi, B., Hall, S., Roncal-Herrero, T., Freeman, C., Woolley, J., Crisp, M. K., Wilson, J. C., Fotakis, A., Fischer, R., Kessler, B., Rakownikow Jersie-Christensen, R., Olsen, J., Haile, J., Thomas, J., Marean, C., Parkington, J., Presslee, S. L., Lee-Thorp, J., Ditchfield, P., Hamilton, J. F. & 16 others, Ward, M. W., Wang, C. M., Shaw, M., Harrison, T., Dominguez-Rodrigo, M., MacPhee, R., Kwekason, A., Ecker, M., Kolska Horwitz, L., Chazan, M., Kröger, R., Thomas-Oates, J. E., Harding, J., Cappellini, E., Penkman, K. E. H. & Collins, M. J., 27 Sep 2016

    Article in eLife

  16. DRI-Grass: a new experimental platform for addressing grassland ecosystem responses to future precipitation scenarios in south-east Australia

    Power, S. A., Barnett, K., Ochoa-Hueso, R., Facey, S. L., Gibson-Forty, E. V. J., Hartley, S. E., Nielsen, U. N., Tissue, D. T. & Johnson, S. N., 20 Sep 2016

    Article in Frontiers in Plant Science

  17. Local termination criteria for Stochastic Diffusion Search: a comparison with the behaviour of ant nest-site selection

    Bishop, J. M., Martin, A. O. & Robinson, E. J. H., 20 Sep 2016, Lecture Notes in Artificial Intelligence: Proceedings of the 8th International Conference on Computational Collective Intelligence (ICCCI 2016), Halkidiki, Greece. Nguyen, N-T., Manolopoulos, Y., Iliadis, L. & Trawiński, B. (eds.). Springer-Verlag, Vol. 9875. 13 p. (Lecture Notes in Artificial Intelligence).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  18. Differential gene expression according to race and host plant in the pea aphid

    Eyres, I., Jaquiéry, J., Sugio, A., Duvaux, L., Gharbi, K., Zhou, J-J., Legeai, F., Nelson, M., Simon, J-C., Smadja, C. M., Butlin, R. & Ferrari, J., 12 Sep 2016

    Article in Molecular Ecology

  19. Proteasome inhibition for treatment of leishmaniasis, Chagas disease and sleeping sickness

    Khare, S., Nagle, A. S., Biggart, A., Lai, Y. H., Liang, F., Davis, L. C., Barnes, S. W., Mathison, C. J. N., Myburgh, E., Gao, M-Y., Gillespie, J. R., Liu, X., Tan, J. L., Stinson, M., Rivera, I. C., Ballard, J., Yeh, V., Groessl, T., Federe, G., Koh, H. X. Y. & 15 others, Venable, J. D., Bursulaya, B., Shapiro, M., Mishra, P. K., Spraggon, G., Brock, A., Mottram, J. C., Buckner, F. S., Rao, S. P. S., Wen, B. G., Walker, J. R., Tuntland, T., Molteni, V., Glynne, R. J. & Supek, F., 8 Sep 2016

    Article in Nature

  20. The mechanism of ϕC31 integrase directionality: experimental analysis and computational modelling

    Pokhilko, A., Zhao, J., Ebenhöh, O., Smith, M. C. M., Stark, W. M. & Colloms, S. D., 6 Sep 2016

    Article in Nucleic Acids Research

  21. Human migration activities drive the fluctuation of ARGs: Case study of landfills in Nanjing, eastern China

    Sun, M., Ye, M., Schwab, A. P., Li, X., Wan, J., Wei, Z., Wu, J., Friman, V-P., Liu, K., Tian, D., Liu, M., Li, H., Hu, F. & Jiang, X., 5 Sep 2016

    Article in Journal of hazardous materials

  22. Surface Charge Control of Quantum Dot Blinking

    Quinn, S. D., Rafferty, A., Dick, E., Morten, M. J., Kettles, F. J., Knox, C., Murrie, M. & Magennis, S. W., 1 Sep 2016

    Article in Journal of Physical Chemistry C

  23. Characterising rhamnolipid production in Burkholderia thailandensis E264, a non-pathogenic producer

    Funston, S. J., Tsaousi, K., Rudden, M., Smyth, T. J., Stevenson, P. S., Marchant, R. & Banat, I. M., Sep 2016

    Article in APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

  24. A new look at the LTR retrotransposon content of the chicken genome

    Mason, A. S., Fulton, J. E., Hocking, P. M. & Burt, D. W., 30 Aug 2016

    Article in BMC Genomics

  25. Shell evolution approaching the N=20 island of inversion: Structure of 26Na

    Wilson, G. L., Catford, W. N., Orr, N. A., Diget, C. A., Matta, A., Hackman, G., Williams, S. J., Celik, I. C., Achouri, N. L., Al Falou, H., Ashley, R., Austin, R. A. E., Ball, G. C., Blackmon, J. C., Boston, A. J., Boston, H. C., Brown, S. M., Cross, D. S., Djongolov, M., Drake, T. E. & 19 others, Hager, U., Fox, S. P., Fulton, B. R., Galinski, N., Garnsworthy, A. B., Jamieson, D., Kanungo, R., Leach, K. G., Orce, J. N., Pearson, C. J., Porter-Peden, M., Sarazin, F., Simpson, E. C., Sjue, S., Smalley, D., Sumithrarachchi, C., Triambak, S., Unsworth, C. & Wadsworth, R., 10 Aug 2016

    Article in Physics Letters B

  26. Cooperation of imipramine blue and tyrosine kinase blockade demonstrates activity against chronic myeloid leukemia

    Laidlaw, K. M. E., Berhan, S., Liu, S., Silvestri, G., Holyoake, T. L., Frank, D. A., Aggarwal, B., Bonner, M. Y., Perrotti, D., Jørgensen, H. G. & Arbiser, J. L., 9 Aug 2016

    Article in Oncotarget

  27. The structure of sperm Izumo1 reveals unexpected similarities with Plasmodium invasion proteins.

    Nishimura, K., Han, L., Bianchi, E., Wright, G. J., de Sanctis, D. & Jovine, L., 25 Jul 2016

    Article in Current Biology

  28. TWIST1 Integrates Endothelial Responses to Flow in Vascular Dysfunction and Atherosclerosis

    Mahmoud, M. M., Kim, H. R., Xing, R., Hsiao, S., Mammoto, A., Chen, J., Serbanovic-Canic, J., Feng, S., Bowden, N. P., Maguire, R., Ariaans, M., Francis, S. E., Weinberg, P. D., van der Heiden, K., Jones, E. A., Chico, T. J. A., Ridger, V. & Evans, P. C., 22 Jul 2016

    Article in Circulation Research

  29. Allosteric Regulation of Fibronectin/α5β1 Interaction by Fibronectin-Binding MSCRAMMs

    Liang, X., Garcia, B. L., Visai, L., Prabhakaran, S., Meenan, N. A. G., Potts, J. R., Humphries, M. J. & Höök, M., 19 Jul 2016

    Article in PLoS ONE

  30. The anti-sigma factor RsrA responds to oxidative stress by reburying its hydrophobic core

    Rajasekar, K. V., Zdanowski, K., Yan, J., Hopper, J. T. S., Francis, M-L. R., Seepersad, C., Sharp, C., Pecqueur, L., Werner, J. M., Robinson, C. V., Mohammed, S., Potts, J. R. & Kleanthous, C., 19 Jul 2016

    Article in Nature Communications

  31. Molecular architecture of the complete COG tethering complex

    Ha, J. Y., Chou, H-T., Ungar, D., Yip, C. K., Walz, T. & Hughson, F. M., 18 Jul 2016

    Article in Nature Structural & Molecular Biology

  32. From local scenarios to national maps: a participatory framework for envisioning the future of Tanzania

    Capitani, C., Mukama, K., Mbilinyi, B., Malugu, I., Munishi, P., Burgess, N. D., Platts, P. J., Sallu, S. & Marchant, R., 14 Jul 2016

    Article in Ecology and Society

  33. Linkage Mapping of Stem Saccharification Digestibility in Rice

    Liu, B., Gómez, L. D., Hua, C., Sun, L., Ali, I., Huang, L., Yu, C., Simister, R., Steele-King, C., Gan, Y. & McQueen-Mason, S. J., 12 Jul 2016

    Article in PLoS ONE

  34. Binding of Plasmodium falciparum Merozoite Surface Proteins DBLMSP and DBLMSP2 to Human Immunoglobulin M Is Conserved among Broadly Diverged Sequence Variants.

    Crosnier, C., Iqbal, Z., Knuepfer, E., Maciuca, S., Perrin, A. J., Kamuyu, G., Goulding, D., Bustamante, L. Y., Miles, A., Moore, S. C., Dougan, G., Holder, A. A., Kwiatkowski, D. P., Rayner, J. C., Pleass, R. J. & Wright, G. J., 1 Jul 2016

    Article in The Journal of biological chemistry

  35. Decline of a rare moth at its last known English site: causes and lessons for conservation

    Baker, D., Barrett, S., Beale, C. M., Crawford, T. J., Ellis, S., Gullett, T., Mayhew, P. J., Parsons, M. S., Relf, P., Robertson, P., Small, J. & Wainwright, D., 22 Jun 2016

    Article in PLoS ONE

  36. Tbet or Continued RORγt Expression Is Not Required for Th17-Associated Immunopathology

    Brucklacher-Waldert, V., Ferreira, C., Innocentin, S., Kamdar, S., Withers, D. R., Kullberg, M. C. & Veldhoen, M., 15 Jun 2016

    Article in Journal of Immunology

  37. New advances in chromosome architecture

    Leake, M. C., 14 Jun 2016, Chromosome Architecture: Methods and Protocols . Leake, M. C. (ed.). Springer, 5 p. (Methods in Molecular Biology; vol. 1431).

    Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)peer-review

  38. Laboratory analogue of a supersonic accretion column in a binary star system

    Cross, J. E., Gregori, G., Foster, J. M., Graham, P., Bonnet-Bidaud, J. M., Busschaert, C., Charpentier, N., Danson, C. N., Doyle, H. W., Drake, R. P., Fyrth, J., Gumbrell, E. T., Koenig, M., Krauland, C., Kuranz, C. C., Loupias, B., Michaut, C., Mouchet, M., Patankar, S., Skidmore, J. & 5 others, Spindloe, C., Tubman, E. R., Woolsey, N., Yurchak, R. & Falize, E., 13 Jun 2016

    Article in Nature Communications

  39. The C-terminal region of Trypanosoma cruzi MASPs is antigenic and secreted via exovesicles.

    De Pablos Torro, L. M., Diaz Lozano, I. M., Jercic, M. I., Quinzada, M., Giménez, M. J., Calabuig, E., Espino, A. M., Schijman, A. G., Zulantay, I., Apt, W. & Osuna, A., 8 Jun 2016

    Article in Scientific Reports

  40. Morphology-Specific Inhibition of β-Amyloid Aggregates by 17β-Hydroxysteroid Dehydrogenase Type 10

    Aitken, L., Quinn, S. D., Perez-Gonzalez, C., Samuel, I. D. W., Penedo, J. C. & Gunn-Moore, F. J., 2 Jun 2016

    Article in Chembiochem

  41. A repeat protein links Rubisco to form the eukaryotic carbon-concentrating organelle

    Mackinder, L. C. M., Meyer, M. T., Mettler-Altmann, T., Chen, V. K., Mitchell, M. C., Caspari, O., Rosenzweig, E. S. F., Pallesen, L., Reeves, G., Itakura, A., Roth, R., Sommer, F., Geimer, S., Mühlhaus, T., Schroda, M., Goodenough, U., Stitt, M., Griffiths, H. & Jonikas, M. C., 24 May 2016

    Article in Proceedings of the National Academy of Sciences of the United States of America

  42. Cysteine peptidase B regulates Leishmania mexicana virulence through the modulation of GP63 expression

    Mottram, J. C., Pierre-Andre, C., McMaster, W. R., Martel, C., Oliver, M. & Descoteaux, A., 18 May 2016

    Article in PLOS PATHOGENS

  43. Codon-Driven Translational Efficiency Is Stable across Diverse Mammalian Cell States

    Rudolph, K. L. M., Schmitt, B. M., Villar, D., White, R. J., Marioni, J. C., Kutter, C. & Odom, D. T., 11 May 2016

    Article in PLoS Genetics

  44. An epigenetic reprogramming strategy to re-sensitize radioresistant prostate cancer cells

    Peitzsch, C., Cojoc, M., Hein, L., Kurth, I., Mӓbert, K., Trautmann, F., Klink, B., Schrock, E., Wirth, M. P., Krause, M., Stakhovsky, E. A., Telegeev, G. D., Novotny, V., Toma, M. I., Muders, M., Baretton, G. B., Frame, F. M., Maitland, N. J., Baumann, M. & Dubrovska, A., 1 May 2016

    Article in Cancer research

  45. PNT1 is a C11 Cysteine Peptidase Essential for Replication of the Trypanosome Kinetoplast.

    Grewal, J., McLuskey, K., Das, D., Myburgh, E., Wilkes, J., Brown, E., Lemgruber, L., Gould, M. K., Burchmore, R. J., Coombs, G. H., Schnaufer, A. & Mottram, J. C., 29 Apr 2016

    Article in Journal of Biological Chemistry

  46. Another Continental Vulture Crisis: Africa's Vultures Collapsing toward Extinction

    Ogada, D., Shaw, P., Beyers, R. L., Buij, R., Murn, C., Thiollay, J. M., Beale, C. M., Holdo, R. M., Pomeroy, D., Baker, N., Krüger, S. C., Botha, A., Virani, M. Z., Monadjem, A. & Sinclair, A. R. E., 26 Apr 2016

    Article in Conservation Letters

  47. Epidermal Notch1 recruits RORγ+ group 3 innate lymphoid cells to orchestrate normal skin repair

    Li, Z., Hodgkinson, T., Gothard, E. J., Boroumand, S., Cummins, I., Narang, P., Sawtell, A. K., Coles, J., Leonov, G., Reboldi, A., Buckley, C., Cupedo, T., Siebel, C., Bayat, A., Coles, M. C. & Ambler, C., 21 Apr 2016

    Article in Nature Communications

  48. Cyclin A1 and P450 aromatase promote metastatic homing and growth of stem-like prostate cancer cells in the bone marrow

    Miftakhova, R., Hedblom, A., Semenas, J., Robinson, B. D., Simoulis, A., Malm, J., Rizvanov, A., David Heery, D., Mongan, N. P., Maitland, N. J., Allegrucci, C. & Persson, J. L., 15 Apr 2016

    Article in Cancer research

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