Search research publications and outputs

  1. 2017
  2. C9orf72 poly GA RAN-translated protein plays a key role in amyotrophic lateral sclerosis via aggregation and toxicity

    Lee, Y-B., Baskaran, P., Gomez-Deza, J., Chen, H-J., Nishimura, A. L., Smith, B. N., Troakes, C., Adachi, Y., Stepto, A., Petrucelli, L., Gallo, J-M., Hirth, F., Rogelj, B., Guthrie, S. & Shaw, C. E., 15 Dec 2017

    Article in Human Molecular Genetics

  3. Correction to: Quantifying and understanding carbon storage and sequestration within the Eastern Arc Mountains of Tanzania, a tropical biodiversity hotspot

    Willcock, S., Phillips, O. L., Platts, P. J., Balmford, A., Burgess, N. D., Lovett, J. C., Ahrends, A., Bayliss, J., Doggart, N., Doody, K., Fanning, E., Green, J. M. H., Hall, J., Howell, K. L., Marchant, R., Marshall, A. R., Mbilinyi, B., Munishi, P. K. T., Owen, N., Swetnam, R. D. & 2 others, Topp-Jorgensen, E. J. & Lewis, S. L., 7 Dec 2017

    Article in Carbon Balance and Management

  4. Assembly and comparison of two closely related Brassica napus genomes

    Bayer, P. E., Hurgobin, B., Golicz, A. A., Chan, C-K. K., Yuan, Y., Lee, H., Renton, M., Meng, J., Li, R., Zou, J., Bancroft, I., Chalhoub, B., King, G. J., Batley, J. & Edwards, D., 1 Dec 2017

    Article in Plant biotechnology journal

  5. Conserved asymmetry underpins homodimerization of Dicer-associated double-stranded RNA-binding proteins

    Heyam, A., Coupland, C. E., Dégut, C., Haley, R. A., Baxter, N. J., Jakob, L., Aguiar, P. M., Meister, G., Williamson, M. P., Lagos, D. & Plevin, M. J., 1 Dec 2017

    Article in Nucleic Acids Research

  6. Magneto-optic probe measurements in low density-supersonic jets

    Oliver, D. M., White, T. G., Maybe, P., Kühn-Kauffeldt, M., Döhl, L., Bingham, R., Clarke, R., Graham, P., Heathcote, R., Koenig, M., Kuramitsu, Y., Lamb, D. Q., Meinecke, J., Michel, T., Miniati, F., Notley, M. M., Reville, B., Sarkar, S., Sakawa, Y., Schekochihin, A. A. & 4 others, Tzeferacos, P., Woolsey, N., Park, H. S. & Gregori, G., 1 Dec 2017

    Article in Journal of Instrumentation

  7. Valorising faba bean residual biomass: Effect of farming system and planting time on the potential for biofuel production

    Gómez, L. D., Amalfitano, C., Andolfi, A., Simister, R., Somma, S., Ercolano, M. R., Borrelli, C., McQueen-Mason, S. J., Frusciante, L., Cuciniello, A. & Caruso, G., 1 Dec 2017

    Article in Biomass & bioenergy

  8. A structurally distinct TGF-β mimic from an intestinal helminth parasite potently induces regulatory T cells.

    Johnston, C. J. C., Smyth, D. J., Kodali, R. B., White, M. P. J., Harcus, Y., Filbey, K. J., Hewitson, J. P., Hinck, C. S., Ivens, A., Kemter, A. M., Kildemoes, A. O., Le Bihan, T., Soares, D. C., Anderton, S. M., Brenn, T., Wigmore, S. J., Woodcock, H. V., Chambers, R. C., Hinck, A. P., McSorley, H. J. & 1 others, Maizels, R. M., 23 Nov 2017

    Article in Nature Communications

  9. Spontaneous development of Epstein-Barr Virus associated human lymphomas in a prostate cancer xenograft program

    Taurozzi, A. J., Beekharry, R., Wantoch, M., Labarthe, M-C., Walker, H. F., Seed, R. I., Simms, M. S., Rodrigues, G., Bradford, J., van der Horst, G., van der Pluijm, G. & Collins, A. T., 16 Nov 2017

    Article in PLoS ONE

  10. A transatlantic perspective on 20 emerging issues in biological engineering

    Wintle, B. C., Boehm, C. R., Rhodes, C., Molloy, J. C., Millett, P., Adam, L., Breitling, R., Carlson, R., Casagrande, R., Dando, M., Doubleday, R., Drexler, E., Edwards, B., Ellis, T., Evans, N. G., Hammond, R., Haseloff, J., Kahl, L., Kuiken, T., Lichman, B. R. & 9 others, Matthewman, C. A., Napier, J. A., ÓhÉigeartaigh, S. S., Patron, N. J., Perello, E., Shapira, P., Tait, J., Takano, E. & Sutherland, W. J., 14 Nov 2017

    Article in eLife

  11. Simultaneous two-color imaging in digital holographic microscopy

    Farthing, N. E., Findlay, R. C., Jikeli, J. F., Walrad, P. B., Bees, M. A. & Wilson, L. G., 13 Nov 2017

    Article in Optics Express

  12. An oleuropein β-glucosidase from olive fruit is involved in determining the phenolic composition of virgin olive oil

    Velazquez-Palmero, D., Romero-Segura, C., Garcia-Rodriguez, R., Hernandez, M. L., Vaistij, F. E., Graham, I. A., Perez, A. G. & Martinez-Rivas, J. M., 7 Nov 2017

    Article in Frontiers in Plant Science

  13. Genome-wide linkage and association study implicates the 10q26 region as a major genetic contributor to primary nonsyndromic vesicoureteric reflux

    Darlow, J. M., Darlay, R., Dobson, M. G., Stewart, A., Charoen, P., Southgate, J., Baker, S. C., Xu, Y., Hunziker, M., Lambert, H. J., Green, A. J., Santibanez-Koref, M., Sayer, J. A., Goodship, T. H. J., Puri, P., Woolf, A. S., Kenda, R. B., Barton, D. E. & Cordell, H. J., 6 Nov 2017

    Article in Scientific Reports

  14. A Plant-Feeding Nematode Indirectly Increases the Fitness of an Aphid

    Hoysted, G. A., Lilley, C. J., Field, K. J., Dickinson, M., Hartley, S. E. & Unwin, P. E., 3 Nov 2017

    Article in Frontiers in Plant Science

  15. Targeted metatranscriptomics of compost derived consortia reveals a GH11 exerting an unusual exo-1,4-β-xylanase activity

    Mello, B., Alessi, A., Riaño-Pachón, D., deAzevedo, E., Guimarães, F., Espirito Santo, M., McQueen Mason, S. J., Bruce, N. C. & Polikarpov, I., 2 Nov 2017

    Article in Biotechnology for biofuels

  16. Conducting robust ecological analyses with climate data

    Suggitt, A., Platts, P. J., Barata, I. M., Bennie, J. J., Burgess, M. D., Bystriakova, N., Duffield, S., Ewing, S. R., Gillingham, P. K., Harper, A. B., Hartley, A. J., Hemming, D. L., Maclean, I. M. D., Maltby, K., Marshall, H. H., Morecroft, M. D., Pearce-Higgins, J. W., Pearce-Kelly, P., Phillimore, A. B., Price, J. T. & 4 others, Pyke, A., Stewart, J. A., Warren, R. & Hill, J. K., 1 Nov 2017

    Article in Oikos

  17. Increased sequencing depth does not increase captured diversity of arbuscular mycorrhizal fungi

    Vasar, M., Andreson, R., Davison, J., Jairus, T., Moora, M., Remm, M., Young, J. P. W., Zobel, M. & Öpik, M., 1 Nov 2017

    Article in MYCORRHIZA

  18. COPI mediates recycling of an exocytic SNARE by recognition of a ubiquitin sorting signal

    Xu, P., Hankins, H. M., MacDonald, C., Erlinger, S. J., Frazier, M. N., Diab, N. S., Piper, R. C., Jackson, L. P., MacGurn, J. A. & Graham, T. R., 23 Oct 2017

    Article in eLife

  19. HpARI protein secreted by a helminth parasite suppresses interleukin-33

    Osbourne, M., Soares, D. C., Cohen, E. S., Scott, I. C., Gregory, W. F., Smyth, D. J., Toivakka, M., Kemter, A. M., le Bihan, T., Wear, M., Hoving, D., Filbey, K. J., Hewitson, J. P., Henderson, H., Gonzalez-Ciscar, A., Errington, C., Vermeren, S., Astier, A. L., Wallace, W. A., Schwarze, J. & 3 others, Ivens, A. C., Maizels, R. M. & McSorley, H. J., 17 Oct 2017

    Article in Immunity

  20. dOCRL maintains immune cell quiescence in Drosophila by regulating endosomal traffic

    del Signore, S. J., Biber, S. A., Lehmann, K. S., Heimler, S. R., Rosenfeld, B. H., Eskin, T. L., Sweeney, S. & Rodal, A., 13 Oct 2017

    Article in PLoS Genetics

  21. Insect elevational specialization in a tropical biodiversity hotspot

    Macedo, M. V., Monteiro, R. F., Flinte, V., Almeida-Neto, M., Khattar, G., da Silveira, L. F. L., de O Araujo, C., de O Araujo, R., Colares, C., da S Gomes, C. V., Mendes, C., Santos, E. F. & Mayhew, P. J., 11 Oct 2017

    Article in Insect conservation and diversity

  22. Structural Evidence for the Dopamine-First Mechanism of Norcoclaurine Synthase

    Lichman, B. R., Sula, A., Pesnot, T., Hailes, H. C., Ward, J. M. & Keep, N. H., 10 Oct 2017

    Article in Biochemistry

  23. Membrane Trafficking Modulation during Entamoeba Encystation

    Herman, E. K., Siegesmund, M. A., Bottery, M. J., van Aerle, R., Shather, M. M., Caler, E., Dacks, J. B. & Van Der Giezen, M., 9 Oct 2017

    Article in Scientific Reports

  24. A pan-tropical analysis of the impacts of forest degradation and conversion on local temperature

    Senior, R. A., Hill, J. K., Gonzalez del Pliego, P., Goode, L. K. & Edwards, D. P., 1 Oct 2017

    Article in Ecology and Evolution

  25. Biotin tagging of MeCP2 in mice reveals contextual insights into the Rett syndrome transcriptome

    Johnson, B. S., Zhao, Y-T., Fasolino, M., Lamonica, J. M., Kim, Y. J., Georgakilas, G., Wood, K. H., Bu, D., Cui, Y., Goffin, D. L., Vahedi, G., Kim, T. H. & Zhou, Z., 1 Oct 2017

    Article in Nature Medicine

  26. Circadian rhythms vary over the growing season and correlate with fitness components

    Rubin, M., Brock, M., Davis, A. M., German, Z., Knapp, M., Welch, S., Harmer, S. L., Maloof, J. N., Davis, S. J. & Weinig, C., 1 Oct 2017

    Article in Molecular Ecology

  27. Complex roles of myoglianin in regulating adult performance and lifespan

    Augustin, H., Adcott, J., Elliott, C. J. H. & Partridge, L., 1 Oct 2017

    Article in Fly

  28. The G-box transcriptional regulatory code in Arabidopsis

    Ezer, D., Shepherd, S. JK., Brestovitsky, A., Dickinson, P., Cortijo, S., Charoensawan, V., Box, M. S., Biswas, S., Jaeger, K. E. & Wigge, P. A., 1 Oct 2017

    Article in Plant Physiology

  29. A spatial interactome reveals the protein organization of the algal CO2 concentrating mechanism

    Mackinder, L., Chen, C., Leib, R., Patena, W., Blum, S. R., Rodman, M., Ramundo, S., Adams, C. M. & Jonikas, M. C., 21 Sep 2017

    Article in Cell

  30. The eukaryotic CO2-concentrating organelle is liquid-like and exhibits dynamic reorganization

    Rosenzweig, E. S. F., Xu, B., Cuellar, L. K., Martinez-Sanchez, A., Schaffer, M., Strauss, M., Cartwright, H. N., Ronceray, P., Plitzko, J. M., Foster, F., Wingreen, N. S., Engel, B. E., Mackinder, L. C. M. & Jonikas, M. C., 21 Sep 2017

    Article in Cell

  31. Conformational heterogeneity in a fully-complementary DNA three-way junction with a GC-rich branchpoint

    Toulmin, A., Baltierra-Jasso, L. E., Morten, M. J., Sabir, T., McGlynn, P., Schroeder, G. F., Smith, B. O. & Magennis, S. W., 19 Sep 2017

    Article in Biochemistry

  32. Can collective memories shape fish distributions? A test, linking space-time occurrence models and population demographics

    MacDonald, J., Logemann, K., Krainski, E., Sigurdsson, P., Beale, C. M., Huse, G., Hjollo, S. & Marteinsdottir, G., 13 Sep 2017

    Article in Ecography

  33. Potential for energy production from farm wastes using anaerobic digestion in the UK: An economic comparison of different size plants

    Oreggioni, G. D., Gowreesunker, B. L., Tassou, S. A., Bianchi, G., Reilly, M., Kirby, M. E., Toop, T. A. & Theodorou, M. K., 13 Sep 2017

    Article in Energies

  34. Targeting deficiencies in the TLR5 mediated vaginal response to treat female recurrent urinary tract infection

    Ali, A. SM., Mowbray, C., Lanz, M., Stanton, A., Bowen, S., Varley, C. L., Hilton, P., Brown, K., Robson, W., Southgate, J., Aldridge, P., Tyson-Capper, A., Abraham, S., Pickard, R. & Hall, J., 8 Sep 2017

    Article in Scientific Reports

  35. A DiCre recombinase-based system for inducible expression in Leishmania major

    Santos, R. E. R. S., Silva, G. L. A., Santos, E. V., Duncan, S. M., Mottram, J. C., Damasceno, J. D. & Tosi, L. R. O., 1 Sep 2017

    Article in MOLECULAR AND BIOCHEMICAL PARASITOLOGY

  36. A national-scale assessment of climate change impacts on species: assessing the balance of risks and opportunities for multiple taxa

    Pearce-Higgins, J. W., Beale, C. M., Oliver, T., August, T., Carroll, M. J., Massimino, D., Ockendon, N., Savage, J., Wheatley, C. J., Ausden, M., Bradbury, R. B., Duffield, S., Macgregor, N., McClean, C. J., Morecroft, M. D., Thomas, C., Watts, O., Beckmann, B., Fox, R., Roy, H. E. & 3 others, Sutton, P., Walker, K. & Crick, H. Q. P., 1 Sep 2017

    Article in Biological Conservation

  37. Architecture and dynamics of the jasmonic acid gene regulatory network

    Hickman, R., Van Verk, M. C., Van Dijken, A. J. H., Pereira Mendes, M., Vroegop-Vos, I. A., Caarls, L., Steenbergen, M., Van der Nagel, I., Wesselink, G. J., Jironkin, A., Talbot, A., Rhodes, J., De Vries, M., Schuurink, R. C., Denby, K., Pieterse, C. M. J. & Van Wees, S. CM., 1 Sep 2017

    Article in The Plant Cell

  38. Investigating the structural compaction of biomolecules upon transition to the gas-phase using ESI-TWIMS-MS

    Devine, P. W. A., Fisher, H. C., Calabrese, A. N., Whelan, F., Higazi, D. R., Potts, J. R., Lowe, D. C., Radford, S. E. & Ashcroft, A. E., 1 Sep 2017

    Article in JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY

  39. Transcription factor clusters regulate genes in eukaryotic cells

    Wollman, A., Shashkova, S., Hedlund, E. G., Friemann, R., Hohmann, S. & Leake, M. C., 25 Aug 2017

    Article in eLife

  40. Flexible silicon-based alpha-particle detector

    Schuster, C. S., Smith, B. R., Sanderson, B. J., Mullins, J. T., Atkins, J., Joshi, P., McNamara, L., Krauss, T. F. & Jenkins, D. G., 16 Aug 2017

    Article in Applied Physics Letters

  41. Re-tuning the Catalytic Bias and Overpotential of a [NiFe]-hydrogenase via a Single Amino Acid Exchange at the Electron Entry/exit Site

    Parkin, A., Adamson, H., Robinson, M., Wright, J. J., Flanagan, L. A., Walton, J., Elton, D. M., Gavaghan, D. J., Bond, A. M. & Roessler, M. M., 9 Aug 2017

    Article in Journal of the American Chemical Society

  42. Imaging the cell

    Carrascosa, J. L. & Leake, M. C., 3 Aug 2017

    Article in Biophysical Reviews

  43. Local factors mediate the response of biodiversity to land use on two African mountains

    Jung, M., Hill, S. L. L., Platts, P. J., Marchant, R., Siebert, S., Fournier, A., Munyekenye, F. B., Purvis, A., Burgess, N. D. & Newbold, T., 1 Aug 2017

    Article in Animal Conservation

  44. Behavioural synchronization of large-scale animal movements - disperse alone, but migrate together?

    Cote, J., Bocedi, G., Debeffe, L., Chudzińska, M. E., Weigang, H. C., Dytham, C., Gonzalez, G., Matthysen, E., Travis, J., Baguette, M. & Hewison, A. J. M., Aug 2017

    Article in Biological reviews

  45. Overexpression of Arabidopsis FLOWERING LOCUS T (FT) gene improves floral development in cassava (Manihot esculenta, Crantz)

    Adeyemo, O. S., Chavarriaga, P., Tohme, J., Fregene, M., Davis, S. J. & Setter, T. L., 28 Jul 2017

    Article in PLoS ONE

  46. Genome-wide and protein kinase-focused RNAi screens reveal conserved and novel damage response pathways in Trypanosoma brucei

    Stortz, J. A., Serafim, T. D., Alsford, S., Wilkes, J., Fernandez-Cortes, F., Hamilton, G., Briggs, E., Lemgruber, L., Horn, D., Mottram, J. C. & McCulloch, R., 24 Jul 2017

    Article in PLOS PATHOGENS

  47. RNAi screening identifies Trypanosoma brucei stress response protein kinases required for survival in the mouse

    Fernandez-Cortes, F., Serafim, T. D., Wilkes, J. M., Jones, N. G., Ritchie, R., McCulloch, R. & Mottram, J. C., 21 Jul 2017

    Article in Scientific Reports

  48. Historical biome distribution and recent human disturbance shape the diversity of arbuscular mycorrhizal fungi

    Partel, M., Öpik, M., Tedersoo, L., Szava-Kovats, R., Rosendahl, S., Rillig, M. C., Lekberg, Y., Kreft, H., Helgason, T., Eriksson, O., Davison, J., de Bello, F., Caruso, T., Zobel, M. & Moora, M., 19 Jul 2017

    Article in New Phytologist

  49. Inactivation of thermogenic UCP1 as a historical contingency in multiple placental mammal clades

    Gaudry, M. J., Jastroch, M., Treberg, J. R., Hofreiter, M., Paijmans, J. L. A., Starrett, J., Wales, N., Signore, A. V., Springer, M. S. & Campbell, K. L., 12 Jul 2017

    Article in Science Advances

  50. Continent-level drivers of African pyrodiversity

    Hempson, G. J., Parr, C. L., Archibald, S., Anderson, T. M., Courtney-Mustaphi, C. J., Dobson, A. P., Donaldson, J. E., Morrison, T. A., Probert, J., Beale, C. M. & Anderson, T. M., 11 Jul 2017

    Article in Ecography

  51. Argonaute Utilization for miRNA Silencing Is Determined by Phosphorylation-Dependent Recruitment of LIM-Domain-Containing Proteins

    Bridge, K. S., Shah, K. M., Li, Y., Foxler, D. E., Wong, S. C. K., Miller, D. C., Davidson, K. M., Foster, J. G., Rose, R., Hodgkinson, M. R., Ribeiro, P. S., Aboobaker, A. A., Yashiro, K., Wang, X., Graves, P. R., Plevin, M. J., Lagos, D. & Sharp, T. V., 5 Jul 2017

    Article in Cell reports

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