Search research publications and outputs

  1. 2017
  2. Molecular tools to engineer cyanobacteria for industrial biotechnology

    Madsen et al. , 2017.

    Research output: Contribution to conferencePosterpeer-review

  3. Recessive mutations in the kinase ZAK cause a congenital myopathy with fibre type disproportion

    Vasli, N., Harris, E., Karamchandani, J., Bareke, E., Majewski, J., Romero, N. B., Stojkovic, T., Barresi, R., Tasfaout, H., Charlton, R., Malfatti, E., Bohm, J., Marini-Bettolo, C., Choquet, K., Dicaire, M-J., Shao, Y-H., Topf, A., O'Ferrall, E., Eymard, B., Straub, V. & 5 others, Blanco, G., Lochmüller, H., Brais, B., Laporte, J. & Tétreault, M., 1 Jan 2017

    Article in Brain : a journal of neurology

  4. Epithelial-to-mesenchymal transition drives a pro-metastatic Golgi compaction process through scaffolding protein PAQR11

    Tan, X., Banerjee, P., Guo, H-F., Ireland, S., Pankova, D., Ahn, Y., Nikolaidis, I. M., Liu, X., Zhao, Y., Xue, Y., Burns, A. R., Roybal, J., Gibbons, D. L., Zal, T., Creighton, C. J., Ungar, D., Wang, Y. & Kurie, J. M., 3 Jan 2017

    Article in Journal of Clinical Investigation

  5. A New Chicken Genome Assembly Provides Insight into Avian Genome Structure

    Warren, W. C., Hillier, L. W., Tomlinson, C., Minx, P., Kremitzki, M., Graves, T., Markovic, C., Bouk, N., Pruitt, K. D., Thibaud-Nissen, F., Schneider, V., Mansour, T. A., Brown, C. T., Zimin, A., Hawken, R., Abrahamsen, M., Pyrkosz, A. B., Morisson, M., Fillon, V., Vignal, A. & 12 others, Chow, W., Howe, K., Fulton, J. E., Miller, M. M., Lovell, P., Mello, C. V., Wirthlin, M., Mason, A. S., Kuo, R., Burt, D. W., Dodgson, J. B. & Cheng, H. H., 5 Jan 2017

    Article in G3: Genes, Genomes, Genetics

  6. Genome sequence and genetic diversity of European ash trees

    Sollars, E., Harper, A. L., Kelly, L., Sambles, C., Ramirez-Gonzalez, R., Swarbreck, D., Kaithakottil, G., Cooper, E., Uauy, C., Havlickova, L., Worswick, G., Studholme, D., Zohren, J., Salmon, D., Clavijo, B., Li, Y., He, Z., Fellgett, A., McKinney, L., Nielsen, L. & 10 others, Douglas, G., Kjaer, E., Downie, A., Boshier, D., Lee, S., Clark, J., Grant, M., Bancroft, I., Caccamo, M. & Buggs, R., 12 Jan 2017

    Article in Nature

  7. Increasing the potential for malaria elimination by targeting zoophilic vectors

    Waite, J. L., Swain, S., Lynch, P. A., Sharma, S. K., Haque, M. A., Montgomery, J. & Thomas, M. B., 16 Jan 2017

    Article in Scientific Reports

  8. Leishmania HASP and SHERP Genes are Required for In Vivo Differentiation, Parasite Transmission and Virulence Attenuation in the Host

    Doehl, J. S. P., Sádlová, J., Aslan, H., Pružinová, K., Metangmo, S., Votýpka, J., Kamhawi, S., Volf, P. & Smith, D. F., 17 Jan 2017

    Article in PLOS PATHOGENS

  9. Targeted re-sequencing confirms the importance of chemosensory genes in aphid host race differentiation

    Eyres, I., Duvaux, L., Gharbi, K., Tucker, R., Hopkins, D., Simon, J-C., Ferrari, J., Smadja, C. M. & Butlin, R. K., 17 Jan 2017

    Article in Molecular Ecology

  10. Reproductive Conflict and the Evolution of Menopause in Killer Whales

    Croft, D., Ellis, S., Franks, D. W., Nattrass, S., Johnstone, R. A., Brent, L. J. N., Mazzi, S., Balcomb, K. C., Ford, J. K. B. & Cant, M. A., 23 Jan 2017

    Article in Current Biology

  11. Transient structural variations have strong effects on quantitative traits and reproductive isolation in fission yeast.

    Jeffares, D. C., Jolly, C., Hoti, M., Speed, D., Shaw, L., Rallis, C., Balloux, F., Dessimoz, C., Bähler, J. & Sedlazeck, F. J., 24 Jan 2017

    Article in Nature Communications

  12. Meneco, a Topology-Based Gap-Filling Tool Applicable to Degraded Genome-Wide Metabolic Networks

    Prigent, S., Frioux, C., Dittami, S. D., Larhlimi, A., Collet, G., Gutknecht, F., Got, J., Eveillard, D., Bourdon, J., Plewniak, F., Tonon, T. & Siegel, A., 27 Jan 2017

    Article in PLoS Computational Biology

  13. How does elevated ozone reduce methane emissions from peatlands?

    Toet, S., Oliver, V., Ineson, P., McLoughlin, S., Helgason, T., Peacock, S., Stott, A. W., Barnes, J. & Ashmore, M., 1 Feb 2017

    Article in Science of the Total Environment

  14. Fear of predation drives stable and differentiated social relationships in guppies

    Heathcote, R. J. P., Darden, S. K., Franks, D. W., Ramnarine, I. W. & Croft, D. P., 2 Feb 2017

    Article in Scientific Reports

  15. The structure and function of an RNA polymerase interaction domain in the PcrA/UvrD helicase

    Sanders, K., Lin, C-L., Smith, A. J., Cronin, N., Fisher, G., Eftychidis, V., McGlynn, P., Savery, N. J., Wigley, D. B. & Dillingham, M. S., 4 Feb 2017

    Article in Nucleic Acids Research

  16. P113 is a merozoite surface protein that binds the N terminus of Plasmodium falciparum RH5.

    Galaway, F., Drought, L. G., Fala, M., Cross, N., Kemp, A. C., Rayner, J. C. & Wright, G. J., 10 Feb 2017

    Article in Nature Communications

  17. A Modest Addendum to the English Sediment Core Meta-Database

    Woodhouse, E. L., Ratcliffe, J. L., Andersen, R., Suggitt, A., Maclean, I. & Payne, R. J., 20 Feb 2017

    Article in Open Quaternary

  18. Genomic RNA folding mediates assembly of human parechovirus

    Twarock, R., Dykeman, E. C., Shakeel, S., White, S., Ora, A., Cockburn, J., Butcher, S. & Stockley, P., 23 Feb 2017

    Article in Nature Communications

  19. The Rehabilitation Effectiveness for Activities for Life (REAL) study: A national programme of research into NHS inpatient mental health rehabilitation services across England

    Killaspy, H., King, M., Holloway, F., Jamieson-Craig, T. K., Cook, S., Mundy, T., Leavey, G., McCrone, P. R., Koeser, L. A., Omar, R., Marston, L., Arbuthnott, M., Green, N., Harrison, I., Lean, M., Gee, M. & Bhanbro, S., Mar 2017

    Article in Programme Grants for Applied Research

  20. Hemopoietic-specific Sf3b1-K700E knock-in mice display the splicing defect seen in human MDS but develop anemia without ring sideroblasts

    Mupo, A., Seiler, M., Sathiaseelan, V., Pance, A., Yang, Y., Agrawal, AA., Iorio, F., Bautista, R., Pacharne, S., Tzelepis, K., Manes, N., Wright, P., Papaemmanuil, E., Kent, D. G., Campbell, P. C., Buonamici, S., Bolli, N. & Vassiliou, G. S., 1 Mar 2017

    Article in Leukemia

  21. Towards financially viable phytoextraction and production of plant-based palladium catalysts

    Harumain, Z. A. S., Parker, H. L., Muñoz García, A., Austin, M. J., McElroy, C. R., Hunt, A. J., Clark, J. H., Meech, J. A., Anderson, C. W. N., Ciacci, L., Graedel, T. E., Bruce, N. C. & Rylott, E. L., 7 Mar 2017

    Article in Environmental science & technology

  22. The importance of temperature fluctuations in understanding mosquito population dynamics and malaria risk

    Beck-Johnson, L. M., Nelson, W. A., Paaijmans, K. P., Read, A., Thomas, M. B. & Bjørnstad, O. N., 8 Mar 2017

    Article in Royal Society Open Science

  23. Inhibiting translation elongation can aid genome duplication in Escherichia coli

    Myka, K. K., Hawkins, M., Syeda, A. H., Gupta, M. K., Meharg, C., Dillingham, M. S., Savery, N. J., Lloyd, R. G. & McGlynn, P., 17 Mar 2017

    Article in Nucleic Acids Research

  24. Macrophage origin limits functional plasticity in helminth-bacterial co-infection

    Rückerl, D., Campbell, S. M., Duncan, S., Sutherland, T. E., Jenkins, S. J., Hewitson, J. P., Barr, T. A., Jackson-Jones, L. H., Maizels, R. M. & Allen, J. E., 23 Mar 2017

    Article in PLOS PATHOGENS

  25. Harnessing Diversity from Ecosystems to Crops to Genes

    Buchanan-Wollaston, V., Wilson, Z., Tardieu, F., Beynon, J. & Denby, K., 30 Mar 2017

    Article in Food and Energy Security

  26. X-ray spectroscopy of super-intense laser-produced plasmas for the study of nonlinear processes. Comparison with PIC simulations

    Dalimier, E., Ya Faenov, A., Oks, E., Angelo, P., Pikuz, T. A., Fukuda, Y., Andreev, A., Koga, J., Sakaki, H., Kotaki, H., Pirozhkov, A., Hayashi, Y., Skobelev, I. Y., Pikuz, S. A., Kawachi, T., Kando, M., Kondo, K., Zhidkov, A., Tubman, E., Butler, N. M. H. & 8 others, Dance, R. J., Alkhimova, M. A., Booth, N., Green, J., Gregory, C., McKenna, P., Woolsey, N. & Kodama, R., 30 Mar 2017

    Article in Journal of Physics: Conference Series

  27. Frequent exchange of the DNA polymerase during bacterial chromosome replication

    Beattie, T. R., Kapadia, N., Nicolas, E., Uphoff, S., Wollman, A., Leake, M. C. & Reyes-Lamothe, R., 31 Mar 2017

    Article in eLife

  28. Application of Bacteriophages

    Aminov, R., Caplin, J., Chanishvili, N., Coffey, A., Cooper, I., De Vos, D., Doskar, J., Friman, V-P., Kurtboke, I., Pantucek, R., Pirnay, J-P., Resch, G., Rohde, C., Sybesma, W. & Wittmann, J., 11 Apr 2017

    Article in Microbiology Australia

  29. High-Throughput, low-loss, low-cost, and label-free cell separation using electrophysiology-Activated cell enrichment

    Faraghat, S. A., Hoettges, K. F., Steinbach, M. K., van der Veen, D. R., Brackenbury, W. J., Henslee, E. A., Labeed, F. H. & Hughes, M. P., 13 Apr 2017

    Article in Proceedings of the National Academy of Sciences of the United States of America

  30. Elevating expression of MeCP2 T158M rescues DNA binding and Rett syndrome–like phenotypes

    Lamonica, J., Kwon, D., Goffin, D. L., Fenik, P., Johnson, B. S., Cui, Y., Guo, H., Veasey, S. & Zhou, Z., 1 May 2017

    Article in Journal of Clinical Investigation

  31. The nuclear matrix protein CIZ1 facilitates localization of Xist RNA to the inactive X-chromosome territory

    Ridings-Figueroa, R., Stewart, E. R., Nesterova, T. B., Coker, H., Pintacuda, G., Godwin, J., Wilson, R., Haslam, A., Lilley, F., Ruigrok, R., Bageghni, S. A., Albadrani, G., Mansfield, W., Roulson, J-A., Brockdorff, N., Ainscough, J. F. X. & Coverley, D. A., 1 May 2017

    Article in Genes and Development

  32. The Nodulin 26-like intrinsic membrane protein OsNIP3;2 is involved in arsenite uptake by rice lateral roots

    Chen, Y., Sun, S., Tang, Z., Moore, KL., Maathuis, F. J. M., Miller, A. J., McGrath, S. & Zhao, FJ., 17 May 2017

    Article in Journal of Experimental Botany

  33. Proliferation Drives Aging-Related Functional Decline in a Subpopulation of the Hematopoietic Stem Cell Compartment.

    Kirschner, K., Chandra, T., Kiselev, V., Flores-Santa Cruz, D., Macaulay, IC., Park, HJ., Li, J., Kent, DG., Kumar, R., Pask, DC., Hamilton, TL., Hemberg, M., Reik, W. & Green, AR., 23 May 2017

    Article in Cell reports

  34. Silicon-induced root nodulation and synthesis of essential amino acids in a legume is associated with higher herbivore abundance

    Hartley, S. E., Johnson, S. N., Ryalls, J. M. W., Frew, A., DeGabriel, J. L., Duncan, M. & Gherlenda, A. N., 24 May 2017

    Article in Functional Ecology

  35. Genetic complexity of miscanthus cell wall composition and biomass quality for biofuels

    van der Weijde, T., Kamei, C. L. A., Severing, E. I., Torres, A. F., Gomez, L. D., Dolstra, O., Maliepaard, C. A., McQueen-Mason, S. J., Visser, R. G. F. & Trindade, L. M., 25 May 2017

    Article in BMC Genomics

  36. Modelling habitat conversion in miombo woodlands: Insights from Tanzania

    Lobora, A. L., Nahonyo, C. L., Munishi, L. K., Caro, T., Foley, C. & Beale, C. M., 29 May 2017

    Article in Journal of Land Use Science

  37. Correlative super-resolution fluorescence and electron microscopy using conventional fluorescent proteins in vacuo

    O'Toole, P. J., Peddie, C. J., Collinson, L. M., Larijani, B., Cox, S., Way, M., Domart, M-C. & Snetkov, X., 30 May 2017

    Article in JOURNAL OF STRUCTURAL BIOLOGY

  38. Jasmonic acid-dependent regulation of seed dormancy following maternal herbivory in Arabidopsis

    Singh, P., Dave, A., Vaistij, F. E., Worrall, D., Holroyd, G., Wells, J., Kaminski, F., Graham, I. A. & Roberts, M., Jun 2017

    Article in New Phytologist

  39. Palaeogenomes of Eurasian straight-tusked elephants challenge the current view of elephant evolution

    Meyer, M., Palkopoulou, E., Baleka, S., Stiller, M., Penkman, K. E. H., Alt, K. W., Ishida, Y., Mania, D., Mallick, S., Meijer, T., Meller, H., Nagel, S., Nickel, B., Ostritz, S., Rohland, N., Schauer, K., Schüler, T., Roca, A. L., Reich, D., Shapiro, B. & 1 others, Hofreiter, M., 6 Jun 2017

    Article in eLife

  40. Methodology for reliable and reproducible cryopreservation of human cervical tissue

    Fox, J. M., Wiggins, R. C., Moore, J. W. J., Brewer, C., Andrew, A. C. & Martin, F., 9 Jun 2017

    Article in Cryobiology

  41. IGFN1_v1 is required for myoblast fusion and differentiation

    Li, X., Baker, J., Cracknell, T. R., Haynes, A. R. & Blanco, G., 30 Jun 2017

    Article in PLosOne

  42. Enzyme reversal to explore the function of yeast E3 ubiquitin-ligases

    MacDonald, C., Winistorfer, S., Pope, R., Michael E, W. & Piper, R. C., 1 Jul 2017

    Article in Traffic

  43. Argonaute Utilization for miRNA Silencing Is Determined by Phosphorylation-Dependent Recruitment of LIM-Domain-Containing Proteins

    Bridge, K. S., Shah, K. M., Li, Y., Foxler, D. E., Wong, S. C. K., Miller, D. C., Davidson, K. M., Foster, J. G., Rose, R., Hodgkinson, M. R., Ribeiro, P. S., Aboobaker, A. A., Yashiro, K., Wang, X., Graves, P. R., Plevin, M. J., Lagos, D. & Sharp, T. V., 5 Jul 2017

    Article in Cell reports

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