Search research publications and outputs

  1. 2017
  2. Recessive mutations in the kinase ZAK cause a congenital myopathy with fibre type disproportion

    Vasli, N., Harris, E., Karamchandani, J., Bareke, E., Majewski, J., Romero, N. B., Stojkovic, T., Barresi, R., Tasfaout, H., Charlton, R., Malfatti, E., Bohm, J., Marini-Bettolo, C., Choquet, K., Dicaire, M-J., Shao, Y-H., Topf, A., O'Ferrall, E., Eymard, B., Straub, V. & 5 others, Blanco, G., Lochmüller, H., Brais, B., Laporte, J. & Tétreault, M., 1 Jan 2017

    Article in Brain : a journal of neurology

  3. Epithelial-to-mesenchymal transition drives a pro-metastatic Golgi compaction process through scaffolding protein PAQR11

    Tan, X., Banerjee, P., Guo, H-F., Ireland, S., Pankova, D., Ahn, Y., Nikolaidis, I. M., Liu, X., Zhao, Y., Xue, Y., Burns, A. R., Roybal, J., Gibbons, D. L., Zal, T., Creighton, C. J., Ungar, D., Wang, Y. & Kurie, J. M., 3 Jan 2017

    Article in Journal of Clinical Investigation

  4. A New Chicken Genome Assembly Provides Insight into Avian Genome Structure

    Warren, W. C., Hillier, L. W., Tomlinson, C., Minx, P., Kremitzki, M., Graves, T., Markovic, C., Bouk, N., Pruitt, K. D., Thibaud-Nissen, F., Schneider, V., Mansour, T. A., Brown, C. T., Zimin, A., Hawken, R., Abrahamsen, M., Pyrkosz, A. B., Morisson, M., Fillon, V., Vignal, A. & 12 others, Chow, W., Howe, K., Fulton, J. E., Miller, M. M., Lovell, P., Mello, C. V., Wirthlin, M., Mason, A. S., Kuo, R., Burt, D. W., Dodgson, J. B. & Cheng, H. H., 5 Jan 2017

    Article in G3: Genes, Genomes, Genetics

  5. Genome sequence and genetic diversity of European ash trees

    Sollars, E., Harper, A. L., Kelly, L., Sambles, C., Ramirez-Gonzalez, R., Swarbreck, D., Kaithakottil, G., Cooper, E., Uauy, C., Havlickova, L., Worswick, G., Studholme, D., Zohren, J., Salmon, D., Clavijo, B., Li, Y., He, Z., Fellgett, A., McKinney, L., Nielsen, L. & 10 others, Douglas, G., Kjaer, E., Downie, A., Boshier, D., Lee, S., Clark, J., Grant, M., Bancroft, I., Caccamo, M. & Buggs, R., 12 Jan 2017

    Article in Nature

  6. Increasing the potential for malaria elimination by targeting zoophilic vectors

    Waite, J. L., Swain, S., Lynch, P. A., Sharma, S. K., Haque, M. A., Montgomery, J. & Thomas, M. B., 16 Jan 2017

    Article in Scientific Reports

  7. Leishmania HASP and SHERP Genes are Required for In Vivo Differentiation, Parasite Transmission and Virulence Attenuation in the Host

    Doehl, J. S. P., Sádlová, J., Aslan, H., Pružinová, K., Metangmo, S., Votýpka, J., Kamhawi, S., Volf, P. & Smith, D. F., 17 Jan 2017

    Article in PLOS PATHOGENS

  8. Targeted re-sequencing confirms the importance of chemosensory genes in aphid host race differentiation

    Eyres, I., Duvaux, L., Gharbi, K., Tucker, R., Hopkins, D., Simon, J-C., Ferrari, J., Smadja, C. M. & Butlin, R. K., 17 Jan 2017

    Article in Molecular Ecology

  9. Reproductive Conflict and the Evolution of Menopause in Killer Whales

    Croft, D., Ellis, S., Franks, D. W., Nattrass, S., Johnstone, R. A., Brent, L. J. N., Mazzi, S., Balcomb, K. C., Ford, J. K. B. & Cant, M. A., 23 Jan 2017

    Article in Current Biology

  10. Transient structural variations have strong effects on quantitative traits and reproductive isolation in fission yeast.

    Jeffares, D. C., Jolly, C., Hoti, M., Speed, D., Shaw, L., Rallis, C., Balloux, F., Dessimoz, C., Bähler, J. & Sedlazeck, F. J., 24 Jan 2017

    Article in Nature Communications

  11. Meneco, a Topology-Based Gap-Filling Tool Applicable to Degraded Genome-Wide Metabolic Networks

    Prigent, S., Frioux, C., Dittami, S. D., Larhlimi, A., Collet, G., Gutknecht, F., Got, J., Eveillard, D., Bourdon, J., Plewniak, F., Tonon, T. & Siegel, A., 27 Jan 2017

    Article in PLoS Computational Biology

  12. How does elevated ozone reduce methane emissions from peatlands?

    Toet, S., Oliver, V., Ineson, P., McLoughlin, S., Helgason, T., Peacock, S., Stott, A. W., Barnes, J. & Ashmore, M., 1 Feb 2017

    Article in Science of the Total Environment

  13. Fear of predation drives stable and differentiated social relationships in guppies

    Heathcote, R. J. P., Darden, S. K., Franks, D. W., Ramnarine, I. W. & Croft, D. P., 2 Feb 2017

    Article in Scientific Reports

  14. The structure and function of an RNA polymerase interaction domain in the PcrA/UvrD helicase

    Sanders, K., Lin, C-L., Smith, A. J., Cronin, N., Fisher, G., Eftychidis, V., McGlynn, P., Savery, N. J., Wigley, D. B. & Dillingham, M. S., 4 Feb 2017

    Article in Nucleic Acids Research

  15. P113 is a merozoite surface protein that binds the N terminus of Plasmodium falciparum RH5.

    Galaway, F., Drought, L. G., Fala, M., Cross, N., Kemp, A. C., Rayner, J. C. & Wright, G. J., 10 Feb 2017

    Article in Nature Communications

  16. A Modest Addendum to the English Sediment Core Meta-Database

    Woodhouse, E. L., Ratcliffe, J. L., Andersen, R., Suggitt, A., Maclean, I. & Payne, R. J., 20 Feb 2017

    Article in Open Quaternary

  17. Genomic RNA folding mediates assembly of human parechovirus

    Twarock, R., Dykeman, E. C., Shakeel, S., White, S., Ora, A., Cockburn, J., Butcher, S. & Stockley, P., 23 Feb 2017

    Article in Nature Communications

  18. The Rehabilitation Effectiveness for Activities for Life (REAL) study: A national programme of research into NHS inpatient mental health rehabilitation services across England

    Killaspy, H., King, M., Holloway, F., Jamieson-Craig, T. K., Cook, S., Mundy, T., Leavey, G., McCrone, P. R., Koeser, L. A., Omar, R., Marston, L., Arbuthnott, M., Green, N., Harrison, I., Lean, M., Gee, M. & Bhanbro, S., Mar 2017

    Article in Programme Grants for Applied Research

  19. Hemopoietic-specific Sf3b1-K700E knock-in mice display the splicing defect seen in human MDS but develop anemia without ring sideroblasts

    Mupo, A., Seiler, M., Sathiaseelan, V., Pance, A., Yang, Y., Agrawal, AA., Iorio, F., Bautista, R., Pacharne, S., Tzelepis, K., Manes, N., Wright, P., Papaemmanuil, E., Kent, D. G., Campbell, P. C., Buonamici, S., Bolli, N. & Vassiliou, G. S., 1 Mar 2017

    Article in Leukemia

  20. Towards financially viable phytoextraction and production of plant-based palladium catalysts

    Harumain, Z. A. S., Parker, H. L., Muñoz García, A., Austin, M. J., McElroy, C. R., Hunt, A. J., Clark, J. H., Meech, J. A., Anderson, C. W. N., Ciacci, L., Graedel, T. E., Bruce, N. C. & Rylott, E. L., 7 Mar 2017

    Article in Environmental science & technology

  21. The importance of temperature fluctuations in understanding mosquito population dynamics and malaria risk

    Beck-Johnson, L. M., Nelson, W. A., Paaijmans, K. P., Read, A., Thomas, M. B. & Bjørnstad, O. N., 8 Mar 2017

    Article in Royal Society Open Science

  22. Inhibiting translation elongation can aid genome duplication in Escherichia coli

    Myka, K. K., Hawkins, M., Syeda, A. H., Gupta, M. K., Meharg, C., Dillingham, M. S., Savery, N. J., Lloyd, R. G. & McGlynn, P., 17 Mar 2017

    Article in Nucleic Acids Research

  23. Macrophage origin limits functional plasticity in helminth-bacterial co-infection

    Rückerl, D., Campbell, S. M., Duncan, S., Sutherland, T. E., Jenkins, S. J., Hewitson, J. P., Barr, T. A., Jackson-Jones, L. H., Maizels, R. M. & Allen, J. E., 23 Mar 2017

    Article in PLOS PATHOGENS

  24. Harnessing Diversity from Ecosystems to Crops to Genes

    Buchanan-Wollaston, V., Wilson, Z., Tardieu, F., Beynon, J. & Denby, K., 30 Mar 2017

    Article in Food and Energy Security

  25. X-ray spectroscopy of super-intense laser-produced plasmas for the study of nonlinear processes. Comparison with PIC simulations

    Dalimier, E., Ya Faenov, A., Oks, E., Angelo, P., Pikuz, T. A., Fukuda, Y., Andreev, A., Koga, J., Sakaki, H., Kotaki, H., Pirozhkov, A., Hayashi, Y., Skobelev, I. Y., Pikuz, S. A., Kawachi, T., Kando, M., Kondo, K., Zhidkov, A., Tubman, E., Butler, N. M. H. & 8 others, Dance, R. J., Alkhimova, M. A., Booth, N., Green, J., Gregory, C., McKenna, P., Woolsey, N. & Kodama, R., 30 Mar 2017

    Article in Journal of Physics: Conference Series

  26. Frequent exchange of the DNA polymerase during bacterial chromosome replication

    Beattie, T. R., Kapadia, N., Nicolas, E., Uphoff, S., Wollman, A., Leake, M. C. & Reyes-Lamothe, R., 31 Mar 2017

    Article in eLife

  27. Application of Bacteriophages

    Aminov, R., Caplin, J., Chanishvili, N., Coffey, A., Cooper, I., De Vos, D., Doskar, J., Friman, V-P., Kurtboke, I., Pantucek, R., Pirnay, J-P., Resch, G., Rohde, C., Sybesma, W. & Wittmann, J., 11 Apr 2017

    Article in Microbiology Australia

  28. High-Throughput, low-loss, low-cost, and label-free cell separation using electrophysiology-Activated cell enrichment

    Faraghat, S. A., Hoettges, K. F., Steinbach, M. K., van der Veen, D. R., Brackenbury, W. J., Henslee, E. A., Labeed, F. H. & Hughes, M. P., 13 Apr 2017

    Article in Proceedings of the National Academy of Sciences of the United States of America

  29. Elevating expression of MeCP2 T158M rescues DNA binding and Rett syndrome–like phenotypes

    Lamonica, J., Kwon, D., Goffin, D. L., Fenik, P., Johnson, B. S., Cui, Y., Guo, H., Veasey, S. & Zhou, Z., 1 May 2017

    Article in Journal of Clinical Investigation

  30. The nuclear matrix protein CIZ1 facilitates localization of Xist RNA to the inactive X-chromosome territory

    Ridings-Figueroa, R., Stewart, E. R., Nesterova, T. B., Coker, H., Pintacuda, G., Godwin, J., Wilson, R., Haslam, A., Lilley, F., Ruigrok, R., Bageghni, S. A., Albadrani, G., Mansfield, W., Roulson, J-A., Brockdorff, N., Ainscough, J. F. X. & Coverley, D. A., 1 May 2017

    Article in Genes & development

  31. The Nodulin 26-like intrinsic membrane protein OsNIP3;2 is involved in arsenite uptake by rice lateral roots

    Chen, Y., Sun, S., Tang, Z., Moore, KL., Maathuis, F. J. M., Miller, A. J., McGrath, S. & Zhao, FJ., 17 May 2017

    Article in Journal of Experimental Botany

  32. Proliferation Drives Aging-Related Functional Decline in a Subpopulation of the Hematopoietic Stem Cell Compartment.

    Kirschner, K., Chandra, T., Kiselev, V., Flores-Santa Cruz, D., Macaulay, IC., Park, HJ., Li, J., Kent, DG., Kumar, R., Pask, DC., Hamilton, TL., Hemberg, M., Reik, W. & Green, AR., 23 May 2017

    Article in Cell reports

  33. Silicon-induced root nodulation and synthesis of essential amino acids in a legume is associated with higher herbivore abundance

    Hartley, S. E., Johnson, S. N., Ryalls, J. M. W., Frew, A., DeGabriel, J. L., Duncan, M. & Gherlenda, A. N., 24 May 2017

    Article in Functional Ecology

  34. Genetic complexity of miscanthus cell wall composition and biomass quality for biofuels

    van der Weijde, T., Kamei, C. L. A., Severing, E. I., Torres, A. F., Gomez, L. D., Dolstra, O., Maliepaard, C. A., McQueen-Mason, S. J., Visser, R. G. F. & Trindade, L. M., 25 May 2017

    Article in BMC Genomics

  35. Modelling habitat conversion in miombo woodlands: Insights from Tanzania

    Lobora, A. L., Nahonyo, C. L., Munishi, L. K., Caro, T., Foley, C. & Beale, C. M., 29 May 2017

    Article in Journal of Land Use Science

  36. Correlative super-resolution fluorescence and electron microscopy using conventional fluorescent proteins in vacuo

    O'Toole, P. J., Peddie, C. J., Collinson, L. M., Larijani, B., Cox, S., Way, M., Domart, M-C. & Snetkov, X., 30 May 2017

    Article in JOURNAL OF STRUCTURAL BIOLOGY

  37. Jasmonic acid-dependent regulation of seed dormancy following maternal herbivory in Arabidopsis

    Singh, P., Dave, A., Vaistij, F. E., Worrall, D., Holroyd, G., Wells, J., Kaminski, F., Graham, I. A. & Roberts, M., Jun 2017

    Article in New Phytologist

  38. Palaeogenomes of Eurasian straight-tusked elephants challenge the current view of elephant evolution

    Meyer, M., Palkopoulou, E., Baleka, S., Stiller, M., Penkman, K. E. H., Alt, K. W., Ishida, Y., Mania, D., Mallick, S., Meijer, T., Meller, H., Nagel, S., Nickel, B., Ostritz, S., Rohland, N., Schauer, K., Schüler, T., Roca, A. L., Reich, D., Shapiro, B. & 1 others, Hofreiter, M., 6 Jun 2017

    Article in eLife

  39. Methodology for reliable and reproducible cryopreservation of human cervical tissue

    Fox, J. M., Wiggins, R. C., Moore, J. W. J., Brewer, C., Andrew, A. C. & Martin, F., 9 Jun 2017

    Article in Cryobiology

  40. IGFN1_v1 is required for myoblast fusion and differentiation

    Li, X., Baker, J., Cracknell, T. R., Haynes, A. R. & Blanco, G., 30 Jun 2017

    Article in PLosOne

  41. Enzyme reversal to explore the function of yeast E3 ubiquitin-ligases

    MacDonald, C., Winistorfer, S., Pope, R., Michael E, W. & Piper, R. C., 1 Jul 2017

    Article in Traffic

  42. Argonaute Utilization for miRNA Silencing Is Determined by Phosphorylation-Dependent Recruitment of LIM-Domain-Containing Proteins

    Bridge, K. S., Shah, K. M., Li, Y., Foxler, D. E., Wong, S. C. K., Miller, D. C., Davidson, K. M., Foster, J. G., Rose, R., Hodgkinson, M. R., Ribeiro, P. S., Aboobaker, A. A., Yashiro, K., Wang, X., Graves, P. R., Plevin, M. J., Lagos, D. & Sharp, T. V., 5 Jul 2017

    Article in Cell reports

  43. Inactivation of thermogenic UCP1 as a historical contingency in multiple placental mammal clades

    Gaudry, M. J., Jastroch, M., Treberg, J. R., Hofreiter, M., Paijmans, J. L. A., Starrett, J., Wales, N., Signore, A. V., Springer, M. S. & Campbell, K. L., 12 Jul 2017

    Article in Science Advances

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