Search research publications and outputs

  1. Review article › Research › Peer-reviewed
  2. Modeling the human bone marrow niche in mice: From host bone marrow engraftment to bioengineering approaches

    Abarrategi, A., Mian, S. A., Passaro, D., Rouault-Pierre, K., Grey, W. & Bonnet, D., 5 Mar 2018

    Review article in The Journal of experimental medicine

  3. One hundred priority questions for landscape restoration in Europe

    Ockendon, N., Thomas, D. H. L., Cortina, J., Adams, W. M., Aykroyd, T., Barov, B., Boitani, L., Bonn, A., Branquinho, C., Brombacher, M., Burrell, C., Carver, S., Crick, H. Q. P., Duguy, B., Everett, S., Fokkens, B., Fuller, R. J., Gibbons, D. W., Gokhelashvili, R., Griffin, C. & 18 others, Halley, D. J., Hotham, P., Hughes, F. M. R., Karamanlidis, A. A., McOwen, C. J., Miles, L., Mitchell, R., Rands, M. R. W., Roberts, J., Sandom, C. J., Spencer, J. W., ten Broeke, E., Tew, E. R., Thomas, C. D., Timoshyna, A., Unsworth, R. K. F., Warrington, S. & Sutherland, W. J., 1 May 2018

    Review article in Biological Conservation

  4. Valorisation strategies for cocoa pod husk and its fractions

    Lu, F., Rodriguez-Garcia, J., Van Damme, I., Westwood, N. J., Shaw, L., Robinson, J. S., Warren, G., Chatzifragkou, A., McQueen Mason, S., Gomez, L., Faas, L., Balcombe, K., Srinivasan, C., Picchioni, F., Hadley, P. & Charalampopoulos, D., 1 Dec 2018

    Review article in Current Opinion in Green and Sustainable Chemistry

  5. Meeting abstract › Research › Peer-reviewed
  6. Working paper › Research
  7. Modeling of DNA replication in rapidly growing bacteria with one and two replication origins

    Hawkins, M. S., Retkute, R., Nieduszynski, C. & Rudolph, C., 24 Jun 2018.

    Research output: Working paper

  8. The effectiveness of glass beads for plating cell cultures

    Hawkins, M. S., Prusokas, A., Nieduszynski, C. A. & Retkute, R., 2 Jan 2018.

    Research output: Working paper

  9. Conference contribution › Research
  10. (n,cp) reactions study at the n_TOF facility at CERN: Results for the Cosmological Lithium problem

    (The n-TOF Collaboration [www.cern.ch/ntof]), 1 Jan 2018, Proceedings of the 15th International Conference on Nuclear Reaction Mechanisms, NRM 2018. Cerutti, F., Ferrari, A., Kawano, T., Salvat-Pujol, F. & Talou, P. (eds.). CERN, p. 259-264 6 p. (Proceedings of the 15th International Conference on Nuclear Reaction Mechanisms, NRM 2018).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  11. A hormone arbitration system for energy efficient foraging in robot swarms

    Wilson, J., Timmis, J. & Tyrrell, A., 21 Jul 2018, Towards Autonomous Robotic Systems - 19th Annual Conference, TAROS 2018, Proceedings. Giannaccini, M. E., Giuliani, M. & Assaf, T. (eds.). Springer-Verlag, p. 305-316 12 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10965 LNAI).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  12. Nuclear Astrophysics at n_TOF facility, CERN

    nToF, 1 Jan 2018, Proceedings of the 15th International Conference on Nuclear Reaction Mechanisms, NRM 2018. Cerutti, F., Ferrari, A., Kawano, T., Salvat-Pujol, F. & Talou, P. (eds.). CERN, p. 251-257 7 p. (Proceedings of the 15th International Conference on Nuclear Reaction Mechanisms, NRM 2018).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  13. Real-time, label-free mapping of cell signalling using photonic resonant imaging technology

    Juan-Colás, J., Hitchcock, I. S., Coles, M., Johnson, S. & Krauss, T. F., 1 Jan 2018, 22nd International Conference on Miniaturized Systems for Chemistry and Life Sciences, MicroTAS 2018. Chemical and Biological Microsystems Society, p. 1914-1916 3 p. (22nd International Conference on Miniaturized Systems for Chemistry and Life Sciences, MicroTAS 2018; vol. 4).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  14. Chapter › Research
  15. Biodiversity of Biosurfactants and Roles in Enhancing the (Bio)availability of Hydrophobic Substrates

    Perfumo, A., Rudden, M. M., Marchant, R. & Banat, I., 28 Mar 2018, Biodiversity of Biosurfactants and Roles in Enhancing the (Bio)availability of Hydrophobic Substrates. p. 75-103 29 p.

    Research output: Chapter in Book/Report/Conference proceedingChapter

  16. Griffith, Frederick (1877–1941): Microbiologist

    Thomas, G. H., 12 Jul 2018, Oxford Dictionary of National Biography. Oxford: Oxford University Press, (Oxford Dictionary of National Biography).

    Research output: Chapter in Book/Report/Conference proceedingChapter

  17. Local termination criteria for Swarm Intelligence: a comparison between local Stochastic Diffusion Search and ant nest-site selection

    Martin, A. O., Bishop, J. M., Robinson, E. J. H. & Myatt, D. R., 18 Dec 2018, Transactions on Computational Collective Intelligence. Berlin, Heidelberg: Springer-Verlag, Vol. XXXII. p. 140-166 27 p. (Lecture Notes in Computer Science).

    Research output: Chapter in Book/Report/Conference proceedingChapter

  18. Visualization of hidden epitopes at the inactive X chromosome

    Stewart, E. R. & Coverley, D., 2018, Methods in Molecular Biology. Humana Press Inc., p. 103-112 10 p. (Methods in Molecular Biology; vol. 1861).

    Research output: Chapter in Book/Report/Conference proceedingChapter

  19. Abstract › Research › Peer-reviewed
  20. Electrophysiological characterisation of ion channel activity in tumour slices

    Leslie, T. K. & Brackenbury, W. J., 15 Jan 2018, p. 391. 1 p.

    Research output: Contribution to conferenceAbstractpeer-review

  21. Regulation of voltage-gated sodium channel β1 subunit function and localisation by γ-secretase in metastatic breast cancer cells

    Haworth, A., Baumann, C. G. & Brackenbury, W. J., 15 Jan 2018, p. 394-395. 2 p.

    Research output: Contribution to conferenceAbstractpeer-review

  22. Regulation of voltage-gated sodium channel β1 subunit function by secretase cleavage

    Haworth, A., Baumann, C. G. & Brackenbury, W. J., 15 Sep 2018, p. Proc Physiol Soc 41, C076.

    Research output: Contribution to conferenceAbstractpeer-review

  23. Poster › Research › Peer-reviewed
  24. Brown algal genes impart abiotic stress tolerance in Arabidopsis thaliania

    Rathor et al. , 2018.

    Research output: Contribution to conferencePosterpeer-review

  25. Dissecting biomethane production in anaerobic digestion plants through DNA sequencing

    Alessi, A., Tao, B., Heaven, S., Banks, C., Thomas-Oates, J. E. & Chong, J. P. J., 11 Apr 2018.

    Research output: Contribution to conferencePosterpeer-review

  26. Healthcare provisioning in evolutionary context

    Spikins, P., Needham, A., Wright, B. J. D., Dytham, C. & Hitchens, G. E., 15 Sep 2018.

    Research output: Contribution to conferencePosterpeer-review

  27. Prehistoric Power Station for 21st Century Energy Production

    Alessi, A., Tao, B., Heaven, S., Banks, C., Thomas-Oates, J. E. & Chong, J. P. J., 12 Mar 2018.

    Research output: Contribution to conferencePosterpeer-review

  28. Poster › Research › Not peer-reviewed
  29. Interaction of LRRK2 with Rab GTPases in vivo - York

    Petridi, S., Middleton, A., Fellgett, A., Covill, L. E., Stewart, A., Munns, J., Kohrs, F., Hiesinger, R., Chawla, S. & Elliott, C. J. H., 13 Nov 2018.

    Research output: Contribution to conferencePoster

  30. Interaction of LRRK2-G2019S with Rab GTPases in vivo

    Elliott, C. J. H., Chawla, S., Hiesinger, R., Kohrs, F., Stewart, A., Covill, L. E., Fellgett, A., Middleton, A. & Petridi, S., 4 Sep 2018.

    Research output: Contribution to conferencePoster

  31. Doctoral Thesis › Research
  32. The Sociality and Evolution of Plasmid-Mediated Antimicrobial Resistance

    Bottery, M. J., 17 Jan 2018, White Rose Consortium.

    Research output: ThesisDoctoral Thesis

  33. Comment/debate › Research › Peer-reviewed
  34. Erratum: Publisher Correction: Genome-wide linkage and association study implicates the 10q26 region as a major genetic contributor to primary nonsyndromic vesicoureteric reflux (Scientific reports (2017) 7 1 (14595))

    Darlow, J. M., Darlay, R., Dobson, M. G., Stewart, A., Charoen, P., Southgate, J., Baker, S. C., Xu, Y., Hunziker, M., Lambert, H. J., Green, A. J., Santibanez-Koref, M., Sayer, J. A., Goodship, T. H. J., Puri, P., Woolf, A. S., Kenda, R. B., Barton, D. E. & Cordell, H. J., 8 Jan 2018

    Comment/debate in Scientific Reports

  35. Erratum: Predicting educational achievement from DNA (Molecular psychiatry (2017) 22 2 (267-272))

    Selzam, S., Krapohl, E., von Stumm, S., O'Reilly, P. F., Rimfeld, K., Kovas, Y., Dale, P. S., Lee, J. J. & Plomin, R., 1 Jan 2018

    Comment/debate in Molecular psychiatry

  36. Comment/debate › Research › Not peer-reviewed
  37. Letter › Research › Peer-reviewed
  38. Can Habitat Management Mitigate Disease Impacts on Threatened Amphibians?

    Heard, G. W., Scroggie, M. P., Ramsey, D. S. L., Clemann, N., Hodgson, J. A. & Thomas, C. D., 15 Apr 2018

    Letter in Conservation Letters

  39. Pyrodiversity interacts with rainfall to increase bird and mammal richness in African savannas

    Beale, C. M., Courtney-Mustaphi, C. J., Morrison, T. A., Archibald, S., Anderson, T. M., Dobson, A. P., Donaldson, J. E., Hempson, G. P., Probert, J. & Parr, C. L., 1 Apr 2018

    Letter in Ecology Letters

  40. Article › Research › Peer-reviewed
  41. A HIF–LIMD1 negative feedback mechanism mitigates the pro‐tumorigenic effects of hypoxia

    Bridge, K., Foxler, D. E., Foster, J. G., Grevitt, P., Curry, S., Shah, K. M., Davidson, K. M., Nagano, A., Gadaleta, E., Rhys, H. I., Kennedy, P. T., Hermida, M. A., Chang, T-Y., Shaw, P. E., Reynolds, L. E., McKay, T. R., Wang, H-W., Ribeiro, P. S., Plevin, M. J., Lagos, D. & 7 others, Lemoine, N. R., Rajan, P., Graham, T. A., Chelala, C., Hodivala-Dilke, K. M., Spendlove, I. & Sharp, T. V., 1 Aug 2018

    Article in EMBO Molecular Medicine

  42. A Leishmania infantum genetic marker associated with miltefosine treatment failure for visceral leishmaniasis

    Mottram, J. C., Jeffares, D., Brambilla Carnielli Trindade, J., Crouch, K., Forrester, S. J., Costa Silva, V., Carvalho, S. F. G., Damasceno, J. D., Brown, E., Dickens, N. J., Costa, D. L., Costa, C. H. N. & Dietze, R., 27 Sep 2018

    Article in EBioMedicine

  43. A chitin deacetylase of Podospora anserina has two functional chitin binding domains and a unique mode of action

    Hoßbach, J., Bußwinkel, F., Kranz, A., Wattjes, J., Cord-Landwehr, S. & Moerschbacher, B. M., 1 Mar 2018

    Article in CARBOHYDRATE POLYMERS

  44. A quantitative mass spectrometry-based approach to monitor the dynamics of endogenous chromatin-associated protein complexes

    Papachristou, EK., Kishore, K., Holding, AN., Harvey, K., Roumeliotis, TI., Chilamakuri, CSR., Omarjee, S., Chia, KM., Swarbrick, A., Lim, E., Markowetz, F., Eldridge, M., Siersbaek, R., D'Santos, CS. & Carroll, JS., 13 Jun 2018

    Article in Nature Communications

  45. A single-cell hematopoietic landscape resolves 8 lineage trajectories and defects in Kit mutant mice

    Dahlin, JS., Hamey, FK., Pijuan-Sala, B., Shepherd, M. S., Lau, WWY., Nestorowa, S., Weinreb, C., Wolock, S., Hannah, R., Diamanti, E., Kent, DG., Göttgens, B. & Wilson, NK., 24 May 2018

    Article in Blood

  46. A track of the clones: new developments in cellular barcoding.

    Lyne, A-M., Kent, DG., Laurenti, E., Cornils, K., Glauche, I. & Perié, L., 1 Dec 2018

    Article in Experimental hematology

  47. ALS-associated missense and nonsense TBK1 mutations can both cause loss of kinase function

    de Majo, M., Topp, S. D., Smith, B. N., Nishimura, A. L., Chen, H-J., Soragia-Gkazi, A., Miller, J., Wong, C. H., Vance, C., Baas, F., ten Asbroek, A. LMA., Kenna, K. P., Ticozzi, N., Redondo, A. G., Esteban-Pérez, J., Tiloca, C., Verde, F., Duga, S., Morrison, K. E., Shaw, P. J. & 13 others, Kirby, J., Turner, M. R., Talbot, K., Hardiman, O., Glass, J. D., de Belleroche, J., Gellera, C., Ratti, A., Al-Chalabi, A., Brown Jr., R. H., Silani, V., Landers, J. E. & Shaw, C. E., 25 Jun 2018

    Article in Neurobiology of Aging

  48. Alpha-v-containing integrins are host receptors for the Plasmodium falciparum sporozoite surface protein, TRAP.

    Dundas, K., Shears, M. J., Sun, Y., Hopp, C. S., Crosnier, C., Metcalf, T., Girling, G., Sinnis, P., Billker, O. & Wright, G. J., 24 Apr 2018

    Article in Proceedings of the National Academy of Sciences USA

  49. An immortalised mesenchymal stem cell line maintains mechano-responsive behaviour and can be used as a reporter of substrate stiffness

    Galarza Torre, A., Shaw, J. E., Wood, A., Gilbert, H. T. J., Dobre, O., Genever, P. G., Brennan, K., Richardson, S. M. & Swift, J., 12 Jun 2018

    Article in Scientific Reports

  50. Be 7 (n,p) Li 7 Reaction and the Cosmological Lithium Problem: Measurement of the Cross Section in a Wide Energy Range at n-TOF at CERN

    Damone, L., Barbagallo, M., Mastromarco, M., Mengoni, A., Cosentino, L., Maugeri, E., Heinitz, S., Schumann, D., Dressler, R., Käppeler, F., Colonna, N., Finocchiaro, P., Andrzejewski, J., Perkowski, J., Gawlik, A., Aberle, O., Altstadt, S., Ayranov, M., Audouin, L., Bacak, M. & 31 others, Balibrea-Correa, J., Ballof, J., Bécares, V., Bečvář, F., Beinrucker, C., Bellia, G., Bernardes, A. P., Berthoumieux, E., Billowes, J., Borge, M. J. G., Bosnar, D., Brown, A., Brugger, M., Busso, M., Caamaño, M., Calviño, F., Calviani, M., Cano-Ott, D., Cardella, R., Casanovas, A., Castelluccio, D. M., Catherall, R., Cerutti, F., Chen, Y. H., Chiaveri, E., Correia, J. G. M., Cortés, G., Cortés-Giraldo, M. A., Jenkins, D. G., Wright, T. & (The n-TOF Collaboration [www.cern.ch/ntof]), 24 Jul 2018

    Article in Physical Review Letters

  51. Bringing numerous methods for expression and promoter analysis to a public cloud computing service

    Polanski, K., Gao, B., Mason, S. A., Brown, P., Ott, S., Denby, K. & Wild, D. L., 1 Mar 2018

    Article in Bioinformatics

  52. CXCL4/Platelet Factor 4 is an agonist of CCR1 and drives human monocyte migration

    Fox, J. M., Kausar, F., Day, A., Osborne, M., Hussain, K., Mueller, A., Lin, J., Tsuchiya, T., Kanegasaki, S. & Pease, J., 21 Jun 2018

    Article in Scientific Reports

  53. Caspase-1 self-cleavage is an intrinsic mechanism to terminate inflammasome activity

    Boucher, D., Monteleone, M., Coll, R. C., Chen, K. W., Ross, C. M., Teo, J. L., Gomez, G. A., Holley, C. L., Bierschenk, D., Stacey, K. J., Yap, A. S., Bezbradica, J. S. & Schroder, K., 6 Feb 2018

    Article in The Journal of experimental medicine

  54. Cell-active Small Molecule Inhibitors of the DNA-damage Repair Enzyme Poly(ADP-ribose) Glycohydrolase (PARG): Discovery and Optimization of Orally Bioavailable Quinazolinedione Sulfonamides

    Waszkowycz, B., Smith, K. M., McGonagle, A. E., Jordan, A. M., Acton, B., Fairweather, E. E., Griffiths, L. A., Hamilton, N. M., Hamilton, N. S., Hitchin, J. R., Hutton, C. P., James, D. I., Jones, C. D., Jones, S., Mould, D. P., Small, H. F., Stowell, A. I. J., Tucker, J. A., Waddell, I. D. & Ogilvie, D. J., 13 Dec 2018

    Article in JOURNAL OF MEDICINAL CHEMISTRY

  55. Circadian rhythms are associated with shoot architecture in natural settings.

    Rubin, M., Brock, M., Baker, R. L., Wilcox, S., Anderson, K., Davis, S. J. & Weinig, C., 1 Jul 2018

    Article in New Phytologist

  56. Conditional genome engineering reveals canonical and divergent roles for the Hus1 component of the 9-1-1 complex in the maintenance of the plastic genome of Leishmania.

    Damasceno, J. D., Obonaga, R., Silva, G. L. A., Reis-Cunha, J. L., Duncan, S. M., Bartholomeu, D. C., Mottram, J. C., McCulloch, R. & Tosi, L. R. O., 14 Dec 2018

    Article in Nucleic Acids Research

  57. Cryptic dispersal of Cyanidiophytina (Rhodophyta) in non-acidic environments from Turkey

    Iovinella, M., Eren, A., Pinto, G., Pollio, A., Davis, S. J., Cennamo, P. & Ciniglia, C., 1 Sep 2018

    Article in Extremophiles

  58. Cryptic speciation associated with geographic and ecological divergence in two Amazonian Heliconius butterflies

    Rosser, N. S., Freitas, A., Huertas, B., Joron, M., Lamas, G., Merot, C., Simpson, F., Willmott, K. R., Mallet, J. & Dasmahapatra, K. K., 4 Aug 2018

    Article in Zoological journal of the linnean society

  59. Cutting Edge: Blockade of Inhibitor of Apoptosis Proteins Sensitizes Neutrophils to TNF- but Not Lipopolysaccharide-Mediated Cell Death and IL-1β Secretion

    Chen, K. W., Lawlor, K. E., von Pein, J. B., Boucher, D., Gerlic, M., Croker, B. A., Bezbradica, J. S., Vince, J. E. & Schroder, K., 15 May 2018

    Article in Journal of Immunology

  60. Defining and delivering resilient ecological networks: Nature conservation in England

    Isaac, N. J. B., Brotherton, P. N. M., Bullock, J. M., Gregory, R. D., Boehning-Gaese, K., Connor, B., Crick, H. Q. P., Freckleton, R. P., Gill, J. A., Hails, R. S., Hartikainen, M., Hester, A. J., Milner-Gulland, E. J., Oliver, T. H., Pearson, R. G., Sutherland, W. J., Thomas, C., Travis, J. M. J., Turnbull, L. A., Willis, K. & 2 others, Woodward, G. & Mace, G. M., 1 Nov 2018

    Article in Journal of Applied Ecology

  61. Defining the requirements for the pathogenic interaction between mutant calreticulin and MPL in MPN

    Elf, S., Abdelfattah, N. S., Baral, A. J., Rivera, J., Chen, E. & Mullaly, A., 15 Feb 2018

    Article in Blood

  62. Differential transcription factor expression by human epithelial cells of buccal and urothelial derivation

    Southgate, J., Hustler, A., Eardley, I., Hinley, J. S., Pearson, J. F., Wezel, F., Radvanyi, F. & Baker, S. C., 15 Aug 2018

    Article in Experimental cell research

  63. Differentiation-associated urothelial cytochrome P450 oxidoreductase predicates the xenobiotic-metabolising activity of “luminal” muscle-invasive bladder cancers

    Baker, S. C., Arlt, V., Indra, R., Joel, M., Stiborova, M., Eardley, I., Ahmad, N., Otto, W., Burger, M., Rubenwolf, P. C., Phillips, D. & Southgate, J., 1 May 2018

    Article in Molecular Carcinogenesis

  64. Dissecting the complex regulation of lodging resistance in Brassica napus

    Miller, C. N., Harper, A. L., Trick, M., Wellner, K., Peter, W., Waldron, K. & Bancroft, I., 1 Mar 2018

    Article in Molecular Breeding

  65. Dryland management regimes alter forest habitats and understory arthropod communities

    Johnson, S. N., Lopaticki, G., Aslam, T. J., Barnett, K., Frew, A., Hartley, S. E., Hiltpold, I., Nielsen, U. N. & Ryalls, J. M. W., 1 May 2018

    Article in Annals of applied biology

  66. Effects of microcompartmentation on flux distribution and metabolic pools in Chlamydomonas reinhardtii chloroplasts

    Kuken, A., Sommer, F., Yaneva-Roder, L., Mackinder, L., Hohne, M., Geimer, S., Jonikas, M. C., Schroda, M., Stitt, M., Nikoloski, Z. & Mettler-Altmann, T., 11 Oct 2018

    Article in eLife

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