Search research publications and outputs

  1. 'Palaeoshellomics' reveals the use of freshwater mother-of-pearl in prehistory

    Sakalauskaite, J., Andersen, S. H., Biagi, P., Borrello, M. A., Cocquerez, T., Colonese, A. C., Dal Bello, F., Girod, A., Heumüller, M., Koon, H., Mandili, G., Medana, C., Penkman, K. E., Plasseraud, L., Schlichtherle, H., Taylor, S., Tokarski, C., Thomas, J., Wilson, J., Marin, F. & 1 others, Demarchi, B., 7 May 2019

    Article in eLife

  2. A Spotlight on Rad52 in Cyanidiophytina (Rhodophyta): A Relic in Algal Heritage

    Del Mondo, A., Iovinella, M., Petriccione, M., Nunziata, A., Davis, S. J., Cioppa, D. & Ciniglia, C., 19 Feb 2019

    Article in Plants

  3. Adherence to the iDSI reference case among published cost-per-DALY averted studies

    Emerson, J., Panzer, A., Cohen, J. T., Chalkidou, K., Teerawattananon, Y., Wilkinson, T., Walker, D., Neumann, P. J. & Kim, D. D., 1 May 2019

    Article in PLoS ONE

  4. Ancestral Admixture Is the Main Determinant of Global Biodiversity in Fission Yeast

    Tusso, S., Nieuwenhuis, B. P. S., Sedlazeck, F. J., Davey, J. W., Jeffares, D. C. & Wolf, J. B. W., 9 Sep 2019

    Article in Molecular Biology and Evolution

  5. Anthropogenic modifications to fire regimes in the wider Serengeti-Mara ecosystem

    Probert, J., Parr, K., Holdo, R. M., Anderson, T., Archibald, S., Courtney-Mustaphi, C. J., Dobson, A., Donaldson, J. E., Hempson, G. P., Hopcraft, G., Morrison, T. A. & Beale, C. M., 1 Oct 2019

    Article in Global Change Biology

  6. Assessing London CO2, CH4 and CO emissions using aircraft measurements and dispersion modelling

    Pitt, J. R., Allen, G., Bauguitte, S. J. B., Gallagher, M. W., Lee, J. D., Drysdale, W., Nelson, B., Manning, A. J. & Palmer, P. I., 12 Jul 2019

    Article in Atmospheric Chemistry and Physics

  7. CHC22 clathrin mediates traffic from early secretory compartments for human GLUT4 pathway biogenesis

    Camus, S. M., Camus, M. D., Figueras-Novoa, C., Boncompain, G., Sadacca, L. A., Esk, C., Bigot, A., Gould, G. W., Kioumourtzoglou, D., Perez, F., Bryant, N. J., Mukherjee, S. & Brodsky, F. M., 9 Oct 2019, (Accepted/In press)

    Article in Journal of Cell Biology

  8. Cell wall hydrolases act in concert during aerenchyma development in sugarcane roots

    Grandis, A., Leite, D. C. C., Tavares, E. Q. P., Arenque-Musa, B. C., Gaiarsa, J. W., Martins, M. C. M., De Souza, A. P., Gomez, L. D., Fabbri, C., Mattei, B. & Buckeridge, M. S., 13 Jun 2019

    Article in Annals of Botany

  9. Climate change vulnerability assessment of species

    Foden, W., Young, B., Akçakaya, R., Garcia, R., Hoffman, A., Stein, B., Thomas, C., Wheatley, C. J., Bickford, D., Carr, J., Hole, D., Martin, T., Pacifici, M., Pearce-Higgins, J. W., Platts, P. J., Visconti, P., Watson, J. & Huntley, B., 1 Jan 2019

    Review article in WIREs Climate Change

  10. Climate-induced phenology shifts linked to range expansions in species with multiple reproductive cycles per year

    MacGregor, C. J., Thomas, C., Roy, D. B., Beaumont, M., James, B., Brereton, T., Bridle, J. R., Dytham, C., Fox, R., Gotthard, K., Hoffman, A., Martin, G., Middlebrook, I., Nylin, S., Platts, P. J., Rasteiro, R., Saccheri, I., Villoutreix, R., Wheat, C. & Hill, J. K., 24 Oct 2019

    Article in Nature Communications

  11. Comprehensive quantitation of RNA-protein interaction dynamics by orthogonal organic phase separation (OOPS)

    Queiroz, R. M. L., Smith, T., Villanueva, E., Marti-Solano, M., Monti, M., Pizzinga, M., Mirea, D-M., Ramakrishna, M., Harvey, R. F., Dezi, V., Thomas, G. H., Willis, A. E. & Lilley, K. S., 3 Jan 2019

    Article in Nature Biotechnology

  12. Creek dynamics determine pond subsurface geochemical heterogeneity in East Anglian (UK) salt marshes

    Hutchings, A. M., Antler, G., Wilkening, J., Basu, A., Bradbury, H. J., Clegg, J. A., Gorka, M., Lin, C. Y., Mills, J. V., Pellerin, A., Redeker, K. R. & Sun, X., 14 Mar 2019

    Article in Frontiers in Earth Science

  13. Cross-boundary human impacts compromise the Serengeti-Mara ecosystem

    Veldhuis, M. P., Ritchie, M. E., Ogutu, J. O., Morrison, T. A., Beale, C. M., Estes, A. B., Mwakilema, W., Ojwang, G. O., Parr, C. L., Probert, J., Wargute, P. W., Hopcraft, J. G. C. & Olff, H., 29 Mar 2019

    Article in Science

  14. Cryo-EM structure and in vitro DNA packaging of a thermophilic virus with supersized T=7 capsids

    Bayfield, O. W., Klimuk, E., Winkler, D. C., Hesketh, E. L., Chechik, M., Cheng, N., Dykeman, E. C., Minakhin, L., Ranson, N. A., Severinov, K., Steven, A. C. & Antson, A. A., 26 Feb 2019

    Article in Proceedings of the National Academy of Sciences of the United States of America

  15. Cytonuclear interactions remain stable during allopolyploid evolution despite repeated whole-genome duplications in Brassica

    Ferreira de Carvalho, J., Lucas, J., Deniot, G., Falentin, C., Filangi, O., Gilet, M., Legeal, F., Lode, M., Morice, J., Trotoux, G., Aury, J-M., Barbe, V., Keller, J., Snowdon, R., He, Z., Denoeud, F., Wincker, P., Bancroft, I., Chevre, A-M. & Rosseau-Gueutin, M., 1 May 2019

    Article in The Plant journal

  16. Designing xylan for improved sustainable biofuel production

    Oliveira, D. M., Mota, T. R., Salatta, F. V., Marchiosi, R., Gomez, L. D., McQueen-Mason, S. J., Ferrarese-Filho, O. & Dos Santos, W. D., 11 May 2019

    Article in Plant biotechnology journal

  17. Detecting deterrence from patrol data

    Dobson, A., Milner-Gulland, E. J., Beale, C. M., Ibbett, H. & Keane, A., 1 Jun 2019

    Article in Conservation Biology

  18. Developing a vocabulary and ontology for modeling insect natural history data: example data, use cases, and competency questions

    Stucky, B. J., Balhoff, J. P., Barve, N., Barve, V., Brenskelle, L., Bush, M. H., Dahlem, G. A., Gilbert, J. D. J., Kawahara, A. Y., Keller, O., Lucky, A., Mayhew, P. J., Plotkin, D., Seltmann, K. C., Talamas, E., Vaidya, G., Walls, R., Yoder, M., Zhang, G. & Guralnick, R., 13 Mar 2019

    Article in Biodiversity Data Journal

  19. Direct removal of RNA polymerase barriers to replication by accessory replicative helicases

    Hawkins, M. S., Dimude, J. U., Howard, J. A. L., Smith, A. J., Dillingham, M. S., Savery, N. J., Rudolph, C. J. & McGlynn, P., 14 Mar 2019

    Article in Nucleic Acids Research

  20. Divergent tree seedling communities indicate different trajectories of change among rainforest remnants

    Stride, G. L., Thomas, C., Benedick, S., Hodgson, J. A., Jelling, A., Senior, M. J. M. & Hill, J. K., 1 Nov 2019

    Article in Diversity and Distributions

  21. Early Pleistocene enamel proteome from Dmanisi resolves Stephanorhinus phylogeny

    Cappellini, E., Welker, F., Pandolfi, L., Ramos-Madrigal, J., Samodova, D., Rüther, P. L., Fotakis, A. K., Lyon, D., Moreno-Mayar, J. V., Bukhsianidze, M., Rakownikow Jersie-Christensen, R., Mackie, M., Ginolhac, A., Ferring, R., Tappen, M., Palkopoulou, E., Dickinson, M. R., Stafford, T. W., Chan, Y. L., Götherström, A. & 23 others, Nathan, S. K. S. S., Heintzman, P. D., Kapp, J. D., Kirillova, I., Moodley, Y., Agusti, J., Kahlke, R. D., Kiladze, G., Martínez-Navarro, B., Liu, S., Sandoval Velasco, M., Sinding, M. H. S., Kelstrup, C. D., Allentoft, M. E., Orlando, L., Penkman, K., Shapiro, B., Rook, L., Dalén, L., Gilbert, M. T. P., Olsen, J. V., Lordkipanidze, D. & Willerslev, E., 3 Oct 2019

    Article in Nature

  22. Electrocoagulation treatment of dairy processing and slaughterhouse wastewaters

    Reilly, M., Cooley, A. P., Tito, D., Tassou, S. A. & Theodorou, M. K., 18 Mar 2019

    Conference article in Energy Procedia

  23. Electromagnetic properties of low-lying states in neutron-deficient Hg isotopes: Coulomb excitation of 182Hg, 184Hg, 186Hg and 188Hg

    Wrzosek-Lipska, K., Rezynkina, K., Bree, N., Zielińska, M., Gaffney, L. P., Petts, A., Andreyev, A., Bastin, B., Bender, M., Blazhev, A., Bruyneel, B., Butler, P. A., Carpenter, M. P., Cederkäll, J., Clément, E., Cocolios, T. E., Deacon, A. N., Diriken, J., Ekström, A., Fitzpatrick, C. & 50 others, Fraile, L. M., Fransen, C., Freeman, S. J., García-Ramos, J. E., Geibel, K., Gernhäuser, R., Grahn, T., Guttormsen, M., Hadinia, B., Hadyńska-Klȩk, K., Hass, M., Heenen, P. H., Herzberg, R. D., Hess, H., Heyde, K., Huyse, M., Ivanov, O., Jenkins, D. G., Julin, R., Kesteloot, N., Kröll, T., Krücken, R., Larsen, A. C., Lutter, R., Marley, P., Napiorkowski, P. J., Orlandi, R., Page, R. D., Pakarinen, J., Patronis, N., Peura, P. J., Piselli, E., Próchniak, L., Rahkila, P., Rapisarda, E., Reiter, P., Robinson, A. P., Scheck, M., Siem, S., Singh Chakkal, K., Smith, J. F., Srebrny, J., Stefanescu, I., Tveten, G. M., Van Duppen, P., Van de Walle, J., Voulot, D., Warr, N., Wiens, A. & Wood, J. L., 1 Aug 2019

    Article in European Physical Journal A

  24. Elucidation of a sialic acid metabolism pathway in mucus-foraging Ruminococcus gnavus unravels mechanisms of bacterial adaptation to the gut

    Bell, A., Brunt, J., Crost, E., Vaux, L., Nepravishta, R., Owen, C. D., Latousakis, D., Xiao, A., Li, W., Chen, X., Walsh, M. A., Claesen, J., Angulo, J., Thomas, G. H. & Juge, N., 21 Oct 2019

    Article in Nature Microbiology

  25. Facilitation promotes invasions in plant-associated microbial communities

    Wei, Z., Li, M., Wang, J., Jousset, A., Friman, V-P., Xu, Y., Shen, Q. & Pommier, T., 1 Jan 2019

    Article in Ecology Letters

  26. Field reconstruction from proton radiography of intense laser driven magnetic reconnection

    Palmer, C. A. J., Campbell, P. T., Ma, Y., Antonelli, L., Bott, A. F. A., Gregori, G., Halliday, J., Katzir, Y., Kordell, P., Krushelnick, K., Lebedev, S. V., Montgomery, E., Notley, M., Carroll, D. C., Ridgers, C. P., Schekochihin, A. A., Streeter, M. J. V., Thomas, A. G. R., Tubman, E. R., Woolsey, N. & 1 others, Willingale, L., Aug 2019

    Article in Physics of Plasmas

  27. Fine structure in the α decay of 223U

    Sun, M. D., Liu, Z., Huang, T. H., Zhang, W. Q., Andreyev, A. N., Ding, B., Wang, J. G., Liu, X. Y., Lu, H. Y., Hou, D. S., Gan, Z. G., Ma, L., Yang, H. B., Zhang, Z. Y., Yu, L., Jiang, J., Wang, K. L., Wang, Y. S., Liu, M. L., Li, Z. H. & 12 others, Li, J., Wang, X., Feng, A. H., Lin, C. J., Sun, L. J., Ma, N. R., Zuo, W., Xu, H. S., Zhou, X. H., Xiao, G. Q., Qi, C. & Zhang, F. S., 14 Nov 2019

    Article in Physics Letters B

  28. Fine-scale behavioural adjustments of prey on a continuum of risk

    Kent, M. I. A., Herbert-Read, J. E., McDonald, G., Wood, A. J. & Ward, A. J. W., 22 May 2019

    Article in Proceedings of the Royal Society B: Biological Sciences

  29. Fitness Landscape of the Fission Yeast Genome

    Grech, L., Jeffares, D., Sadee, C. Y., Rodriguez-Lopez, M., Bitton, D. A., Hoti, M., Biagosch, C., Aravani, D., Speekenbrink, M., Illingworth, C. J. R., Schiffer, P. H., Pidoux, A. L., Tong, P., Tallada, V. A., Allshire, R., Levin, H. L. & Bahler, J., 11 May 2019

    Article in Molecular Biology and Evolution

  30. GORAB scaffolds COPI at the trans-Golgi for efficient enzyme recycling and correct protein glycosylation

    Witkos, T. M., Chan, W. L., Joensuu, M., Rhiel, M., Pallister, E., Thomas-Oates, J. E., Mould, P., Mironov, A. A., Biot, C., Guerardel, Y., Morelle, W., Ungar, D., Wieland, F. T., Jokitalo, E., Tassabehji, M., Kornak, U. & Lowe, M., 10 Jan 2019

    Article in Nature Communications

  31. Genome-wide selection footprints and deleterious variations in young Asian allotetraploid rapeseed

    Zou, J., Mao, L., Qiu, J., Wang, M., Jia, L., Wu, D., He, Z., Chen, M., Shen, Y., Shen, E., Huang, Y., Li, R., Hu, D., Shi, L., Wang, K., Zhu, Q-H., Ye, C., Bancroft, I., King, G. J., Meng, J. & 1 others, Fan, L., 1 Oct 2019

    Article in Plant biotechnology journal

  32. Genomic architecture and introgression shape a butterfly radiation

    Edelman, N., Frandsen, P., Miyagi, M., Clavijo, B., Davey, J. W., Dikow, R., García-Accinelli, G., Van Bellegham, S. M., Patterson, N., Neafsey, D. E., Challis, R. J., Kumar, S., Moreira, G. R. P., Salazar, C., Chouteau, M., Counterman, B. A., Papa, R., Blaxter, M., Reed, R. D., Dasmahapatra, K. K. & 9 others, Kronforst, M. R., Joron, M., Jiggins, C. D., McMillan, W. O., Di Palma, F., Blumberg, A. J., Wakeley, J., Jaffe, D. & Mallet, J., 1 Nov 2019

    Article in Science

  33. Going to extremes: The Goldilocks/Lagom principle and data distribution

    Leese, H. J., Sathyapalan, T., Allgar, V., Brison, D. R. & Sturmey, R., 27 Nov 2019

    Article in BMJ Open

  34. Hypoxic changes to the urothelium as a bystander of end-stage bladder disease

    Radford, A. R., Hinley, J. S., Pilborough, A., Southgate, J. & Subramaniam, R., 15 Apr 2019

    Article in Journal of Pediatric Urology

  35. IPIP27 coordinates PtdIns(4,5)P2 homeostasis for successful cytokinesis

    Carim, S. C., Ben El Kadhi, K., Yan, G., Sweeney, S., Hickson, G. R., Carreno, S. & Lowe, M., 4 Mar 2019

    Article in Current Biology

  36. Identification of a novel orally bioavailable ERK5 inhibitor with selectivity over p38α and BRD4

    Tucker, J. A., Myers, S. M., Miller, D. C., Molyneux, L., Arasta, M., Bawn, R. H., Blackburn, T. J., Cook, S. J., Edwards, N., Endicott, J. A., Golding, B. T., Griffin, R. J., Hammonds, T., Hardcastle, I. R., Harnor, S. J., Heptinstall, A. B., Lochhead, P. A., Martin, M. P., Martin, N. C., Newell, D. R. & 10 others, Owen, P. J., Pang, L. C., Reuillon, T., Rigoreau, L. J. M., Thomas, H. D., Wang, L-Z., Wong, A-C., Noble, M. E. M., Wedge, S. R. & Cano, C., 15 Sep 2019

    Article in European Journal of Medicinal Chemistry

  37. Industry-Informed Workshops to Develop Graduate Skill Sets in the Circular Economy Using Systems Thinking

    Summerton, L., Clark, J. H., Hurst, G. A., Ball, P. D., Rylott, E. L., Carslaw, N., Creasey, J., Murray, J., Whitford, J., Dobson, B., Sneddon, H. F., Ross, J., Metcalf, P. & McElroy, C. R., 1 Nov 2019

    Article in JOURNAL OF CHEMICAL EDUCATION

  38. Initial Soil Microbiome Composition and Functioning Predetermine Future Plant Health

    Wei, Z., Gu, Y., Friman, V-P., Kowalchuk, G., Xu, Y., Shen, Q. & Jousset, A., 25 Sep 2019

    Article in Science Advances

  39. Integrated processing of sugarcane bagasse: Arabinoxylan extraction integrated with ethanol production

    Campbell, G. M., Čukelj Mustač, N., Alyassin, M., Gomez, L. D., Simister, R., Flint, J., Philips, D. J., Gronnow, M. J. & Westwood, N. J., 15 Jun 2019

    Article in Biochemical Engineering Journal

  40. Laser wakefield acceleration with active feedback at 5 Hz

    Dann, S. J. D., Baird, C. D., Bourgeois, N., Chekhlov, O., Eardley, S., Gregory, C. D., Gruse, J. N., Hah, J., Hazra, D., Hawkes, S. J., Hooker, C. J., Krushelnick, K., Mangles, S. P. D., Marshall, V. A., Murphy, C. D., Najmudin, Z., Nees, J. A., Osterhoff, J., Parry, B., Pourmoussavi, P. & 12 others, Rahul, S. V., Rajeev, P. P., Rozario, S., Scott, J. D. E., Smith, R. A., Springate, E., Tang, Y., Tata, S., Thomas, A. G. R., Thornton, C., Symes, D. R. & Streeter, M. J. V., 26 Apr 2019

    Article in Physical Review Accelerators and Beams

  41. Latitudinal constraints in responsiveness of plants to arbuscular mycorrhiza: the ‘sun-worshipper’ hypothesis

    Veresoglou, S., Chen, B., Fischer, M., Helgason, T., Mamolos, A., Rillig, M., Roldan, A. & Johnson, D., 5 Jun 2019

    Letter in New Phytologist

  42. Loss of Janus Associated Kinase1 alters urothelial cell functionand facilitates the development of bladder cancer

    Daza-Cajigal, V., Albuquerque, A., Pearson, J. F., Hinley, J. S., Mason, A. S., Stahlschmidt, J., Thrasher, A. J., Mishra, V., Southgate, J. & Burns, S. O., 10 Sep 2019

    Article in Frontiers in immunology

  43. Loving the mess: Navigating diversity and conflict in social values for sustainability

    Kenter, J. O., Raymond, C. M., van Riper, C. J., Azzopardi, E., Brear, M. R., Calcagni, F., Christie, M., Fordham, A., Gould, R. K., Ives, C. D., Hejnowicz, A. P., Gunton, R., Horcea-Milcu, A-I., Kendal, D., Kronenberg, J., Massenberg, J. R., O'Connor, S., Ravenscroft, N., Rawluk, A., Raymond, I. J. & 2 others, Rodriquez-Morales, J. & Thankappan, S., 24 Aug 2019

    Article in Sustainability Science

  44. Macrophage migration inhibitory factor (MIF) is essential for Type 2 effector cell immunity to an intestinal helminth parasite

    Filbey, K. J., Varyani, F., Harcus, Y., Hewitson, J. P., Smyth, D. J., McSorley, H. J., Ivens, A., Nylén, S., Rottenberg, M., Loser, S. & Maizels, R. M., 23 Sep 2019, (Accepted/In press)

    Article in Frontiers in immunology

  45. Maintenance of epigenetic landscape requires CIZ1 and is corrupted in differentiated fibroblasts in long-term culture

    Stewart, E. R., Turner, R. M. L., Newling, K., Ridings Figueroa, R., Scott, V., Ashton, P. D., Ainscough, J. F. X. & Coverley, D. A., 28 Jan 2019

    Article in Nature Communications

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