Search research publications and outputs

  1. 'Palaeoshellomics' reveals the use of freshwater mother-of-pearl in prehistory

    Sakalauskaite, J., Andersen, S. H., Biagi, P., Borrello, M. A., Cocquerez, T., Colonese, A. C., Dal Bello, F., Girod, A., Heumüller, M., Koon, H., Mandili, G., Medana, C., Penkman, K. E., Plasseraud, L., Schlichtherle, H., Taylor, S., Tokarski, C., Thomas, J., Wilson, J., Marin, F. & 1 others, Demarchi, B., 7 May 2019

    Article in eLife

  2. A Spotlight on Rad52 in Cyanidiophytina (Rhodophyta): A Relic in Algal Heritage

    Del Mondo, A., Iovinella, M., Petriccione, M., Nunziata, A., Davis, S. J., Cioppa, D. & Ciniglia, C., 19 Feb 2019

    Article in Plants

  3. A defined mechanistic correlate of protection against Plasmodium falciparum malaria in non-human primates.

    Douglas, A. D., Baldeviano, G. C., Jin, J., Miura, K., Diouf, A., Zenonos, Z. A., Ventocilla, J. A., Silk, S. E., Marshall, J. M., Alanine, D. G. W., Wang, C., Edwards, N. J., Leiva, K. P., Gomez-Puerta, L. A., Lucas, C. M., Wright, G. J., Long, C. A., Royal, J. M. & Draper, S. J., 26 Apr 2019

    Article in Nature Communications

  4. A methodological framework to embrace soil biodiversity

    Geisen, S., Briones, M. J. I., Gan, H., Behan-Pelletier, V. M., Friman, V-P., de Groot, G. A., Hannula, E., Lindo, Z., Philippot, L., Tiunov, A. V. & Wall, D. H., 1 Sep 2019

    Article in Soil Biology and Biochemistry

  5. ATP-dependent dynamic protein aggregation regulates bacterial dormancy depth critical for antibiotic tolerance

    Pu, Y., Li, Y., Jin, X., Tian, T., Ma, Q., Zhao, Z., Lin, S., Chen, Z., Li, B., Yao, G., Leake, M. C., Lo, C-J. & Bai, F., 3 Jan 2019

    Article in Molecular Cell

  6. Adaptation of Plasmodium falciparum to humans involved the loss of an ape-specific erythrocyte invasion ligand.

    Proto, W. R., Siegel, S. V., Dankwa, S., Liu, W., Kemp, A., Marsden, S., Zenonos, Z. A., Unwin, S., Sharp, P. M., Wright, G. J., Hahn, B. H., Duraisingh, M. T. & Rayner, J. C., 4 Oct 2019

    Article in Nature Communications

  7. Adherence to the iDSI reference case among published cost-per-DALY averted studies

    Emerson, J., Panzer, A., Cohen, J. T., Chalkidou, K., Teerawattananon, Y., Wilkinson, T., Walker, D., Neumann, P. J. & Kim, D. D., 1 May 2019

    Article in PLoS ONE

  8. Ancestral Admixture Is the Main Determinant of Global Biodiversity in Fission Yeast

    Tusso, S., Nieuwenhuis, B. P. S., Sedlazeck, F. J., Davey, J. W., Jeffares, D. C. & Wolf, J. B. W., 9 Sep 2019

    Article in Molecular Biology and Evolution

  9. Anthropogenic modifications to fire regimes in the wider Serengeti-Mara ecosystem

    Probert, J., Parr, K., Holdo, R. M., Anderson, T., Archibald, S., Courtney-Mustaphi, C. J., Dobson, A., Donaldson, J. E., Hempson, G. P., Hopcraft, G., Morrison, T. A. & Beale, C. M., 1 Oct 2019

    Article in Global Change Biology

  10. Antibody Reactivity to Merozoite Antigens in Ghanaian Adults Correlates With Growth Inhibitory Activity Against Plasmodium falciparum in Culture.

    Mensah-Brown, H. E., Aspeling-Jones, H., Delimini, R. K., Asante, K. P., Amlabu, E., Bah, S. Y., Beeson, J. G., Wright, G. J., Conway, D. J. & Awandare, G. A., Jul 2019

    Article in Open forum infectious diseases

  11. Assessing London CO2, CH4 and CO emissions using aircraft measurements and dispersion modelling

    Pitt, J. R., Allen, G., Bauguitte, S. J. B., Gallagher, M. W., Lee, J. D., Drysdale, W., Nelson, B., Manning, A. J. & Palmer, P. I., 12 Jul 2019

    Article in Atmospheric Chemistry and Physics

  12. Chemically-induced Neurite-like Outgrowth Reveals Multicellular Network Function in Patient-derived Glioblastoma Cells

    da Silva, B., Irving, B. K., Polson, E. S., Droop, A., Griffiths, H. B. S., Mathew, R. K., Stead, L. F., Marrison, J., Williams, C., Williams, J., Short, S. C., Scarcia, M., O'Toole, P. J., Allison, S. J., Mavria, G. & Wurdak, H., 10 Oct 2019

    Article in Journal of Cell Science

  13. Climate change vulnerability assessment of species

    Foden, W., Young, B., Akçakaya, R., Garcia, R., Hoffman, A., Stein, B., Thomas, C., Wheatley, C. J., Bickford, D., Carr, J., Hole, D., Martin, T., Pacifici, M., Pearce-Higgins, J. W., Platts, P. J., Visconti, P., Watson, J. & Huntley, B., 1 Jan 2019

    Review article in WIREs Climate Change

  14. Climate-induced phenology shifts linked to range expansions in species with multiple reproductive cycles per year

    MacGregor, C. J., Thomas, C., Roy, D. B., Beaumont, M., James, B., Brereton, T., Bridle, J. R., Dytham, C., Fox, R., Gotthard, K., Hoffman, A., Martin, G., Middlebrook, I., Nylin, S., Platts, P. J., Rasteiro, R., Saccheri, I., Villoutreix, R., Wheat, C. & Hill, J. K., 24 Oct 2019

    Article in Nature Communications

  15. Cointroductions of Australian acacias and their rhizobial mutualists in the Southern Hemisphere

    Warrington, S., Ellis, A., Novoa, A., Wandrag, E. M., Hulme, P. E., Duncan, R. P., Valentine, A. & Le Roux, J. J., 21 May 2019

    Article in Journal of biogeography

  16. Comprehensive identification of RNA–protein interactions in any organism using orthogonal organic phase separation (OOPS)

    Queiroz, R. M. L., Smith, T., Villanueva, E., Marti-Solano, M., Monti, M., Pizzinga, M., Mirea, D-M., Ramakrishna, M., Harvey, R. F., Dezi, V., Thomas, G. H., Willis, A. E. & Lilley, K. S., Feb 2019

    Article in Nature Biotechnology

  17. Creek dynamics determine pond subsurface geochemical heterogeneity in East Anglian (UK) salt marshes

    Hutchings, A. M., Antler, G., Wilkening, J., Basu, A., Bradbury, H. J., Clegg, J. A., Gorka, M., Lin, C. Y., Mills, J. V., Pellerin, A., Redeker, K. R. & Sun, X., 14 Mar 2019

    Article in Frontiers in Earth Science

  18. Cross-boundary human impacts compromise the Serengeti-Mara ecosystem

    Veldhuis, M. P., Ritchie, M. E., Ogutu, J. O., Morrison, T. A., Beale, C. M., Estes, A. B., Mwakilema, W., Ojwang, G. O., Parr, C. L., Probert, J., Wargute, P. W., Hopcraft, J. G. C. & Olff, H., 29 Mar 2019

    Article in Science

  19. Cryo-EM structure and in vitro DNA packaging of a thermophilic virus with supersized T=7 capsids

    Bayfield, O. W., Klimuk, E., Winkler, D. C., Hesketh, E. L., Chechik, M., Cheng, N., Dykeman, E. C., Minakhin, L., Ranson, N. A., Severinov, K., Steven, A. C. & Antson, A. A., 26 Feb 2019

    Article in Proceedings of the National Academy of Sciences of the United States of America

  20. Cytonuclear interactions remain stable during allopolyploid evolution despite repeated whole-genome duplications in Brassica

    Ferreira de Carvalho, J., Lucas, J., Deniot, G., Falentin, C., Filangi, O., Gilet, M., Legeal, F., Lode, M., Morice, J., Trotoux, G., Aury, J-M., Barbe, V., Keller, J., Snowdon, R., He, Z., Denoeud, F., Wincker, P., Bancroft, I., Chevre, A-M. & Rosseau-Gueutin, M., 1 May 2019

    Article in The Plant journal

  21. Designing xylan for improved sustainable biofuel production

    Oliveira, D. M., Mota, T. R., Salatta, F. V., Marchiosi, R., Gomez, L. D., McQueen-Mason, S. J., Ferrarese-Filho, O. & Dos Santos, W. D., 6 Nov 2019

    Article in Plant biotechnology journal

  22. Detecting deterrence from patrol data

    Dobson, A., Milner-Gulland, E. J., Beale, C. M., Ibbett, H. & Keane, A., 1 Jun 2019

    Article in Conservation Biology

  23. Detection of cell surface ligands for human synovial γδ T cells.

    Collins, C., Lui, Y., Santos, A. M., Ballif, B. A., Gogerly-Moragoda, A. M., Brouwer, H., Ross, R., Balagurunathan, K., Sharma, S., Wright, G. J., Davis, S. & Budd, R. C., 1 Nov 2019

    Article in Journal of Immunology

  24. Developing a vocabulary and ontology for modeling insect natural history data: example data, use cases, and competency questions

    Stucky, B. J., Balhoff, J. P., Barve, N., Barve, V., Brenskelle, L., Bush, M. H., Dahlem, G. A., Gilbert, J. D. J., Kawahara, A. Y., Keller, O., Lucky, A., Mayhew, P. J., Plotkin, D., Seltmann, K. C., Talamas, E., Vaidya, G., Walls, R., Yoder, M., Zhang, G. & Guralnick, R., 13 Mar 2019

    Article in Biodiversity Data Journal

  25. Early Pleistocene enamel proteome from Dmanisi resolves Stephanorhinus phylogeny

    Cappellini, E., Welker, F., Pandolfi, L., Ramos-Madrigal, J., Samodova, D., Rüther, P. L., Fotakis, A. K., Lyon, D., Moreno-Mayar, J. V., Bukhsianidze, M., Rakownikow Jersie-Christensen, R., Mackie, M., Ginolhac, A., Ferring, R., Tappen, M., Palkopoulou, E., Dickinson, M. R., Stafford, T. W., Chan, Y. L., Götherström, A. & 23 others, Nathan, S. K. S. S., Heintzman, P. D., Kapp, J. D., Kirillova, I., Moodley, Y., Agusti, J., Kahlke, R. D., Kiladze, G., Martínez-Navarro, B., Liu, S., Sandoval Velasco, M., Sinding, M. H. S., Kelstrup, C. D., Allentoft, M. E., Orlando, L., Penkman, K., Shapiro, B., Rook, L., Dalén, L., Gilbert, M. T. P., Olsen, J. V., Lordkipanidze, D. & Willerslev, E., 3 Oct 2019

    Article in Nature

  26. Electromagnetic properties of low-lying states in neutron-deficient Hg isotopes: Coulomb excitation of 182Hg, 184Hg, 186Hg and 188Hg

    Wrzosek-Lipska, K., Rezynkina, K., Bree, N., Zielińska, M., Gaffney, L. P., Petts, A., Andreyev, A., Bastin, B., Bender, M., Blazhev, A., Bruyneel, B., Butler, P. A., Carpenter, M. P., Cederkäll, J., Clément, E., Cocolios, T. E., Deacon, A. N., Diriken, J., Ekström, A., Fitzpatrick, C. & 50 others, Fraile, L. M., Fransen, C., Freeman, S. J., García-Ramos, J. E., Geibel, K., Gernhäuser, R., Grahn, T., Guttormsen, M., Hadinia, B., Hadyńska-Klȩk, K., Hass, M., Heenen, P. H., Herzberg, R. D., Hess, H., Heyde, K., Huyse, M., Ivanov, O., Jenkins, D. G., Julin, R., Kesteloot, N., Kröll, T., Krücken, R., Larsen, A. C., Lutter, R., Marley, P., Napiorkowski, P. J., Orlandi, R., Page, R. D., Pakarinen, J., Patronis, N., Peura, P. J., Piselli, E., Próchniak, L., Rahkila, P., Rapisarda, E., Reiter, P., Robinson, A. P., Scheck, M., Siem, S., Singh Chakkal, K., Smith, J. F., Srebrny, J., Stefanescu, I., Tveten, G. M., Van Duppen, P., Van de Walle, J., Voulot, D., Warr, N., Wiens, A. & Wood, J. L., 1 Aug 2019

    Article in European Physical Journal A

  27. Elucidation of a sialic acid metabolism pathway in mucus-foraging Ruminococcus gnavus unravels mechanisms of bacterial adaptation to the gut

    Bell, A., Brunt, J., Crost, E., Vaux, L., Nepravishta, R., Owen, C. D., Latousakis, D., Xiao, A., Li, W., Chen, X., Walsh, M. A., Claesen, J., Angulo, J., Thomas, G. H. & Juge, N., Dec 2019

    Article in Nature Microbiology

  28. Environmental DNA (eDNA) metabarcoding of pond water as a tool to survey conservation and management priority mammals

    Harper, L., Lawson Handley, L., Carpenter, A., Ghazali, M., Di Muri, C., MacGregor, C. J., Logan, T., Law, A., Breithaupt, T., Read, D., McDevitt, A. & Haenfling, B., Oct 2019

    Article in Biological Conservation

  29. Facilitation promotes invasions in plant-associated microbial communities

    Wei, Z., Li, M., Wang, J., Jousset, A., Friman, V-P., Xu, Y., Shen, Q. & Pommier, T., 1 Jan 2019

    Article in Ecology Letters

  30. Field reconstruction from proton radiography of intense laser driven magnetic reconnection

    Palmer, C. A. J., Campbell, P. T., Ma, Y., Antonelli, L., Bott, A. F. A., Gregori, G., Halliday, J., Katzir, Y., Kordell, P., Krushelnick, K., Lebedev, S. V., Montgomery, E., Notley, M., Carroll, D. C., Ridgers, C. P., Schekochihin, A. A., Streeter, M. J. V., Thomas, A. G. R., Tubman, E. R., Woolsey, N. & 1 others, Willingale, L., Aug 2019

    Article in Physics of Plasmas

  31. Fine-scale behavioural adjustments of prey on a continuum of risk

    Kent, M. I. A., Herbert-Read, J. E., McDonald, G., Wood, A. J. & Ward, A. J. W., 22 May 2019

    Article in Proceedings of the Royal Society B: Biological Sciences

  32. Fitness Landscape of the Fission Yeast Genome

    Grech, L., Jeffares, D., Sadee, C. Y., Rodriguez-Lopez, M., Bitton, D. A., Hoti, M., Biagosch, C., Aravani, D., Speekenbrink, M., Illingworth, C. J. R., Schiffer, P. H., Pidoux, A. L., Tong, P., Tallada, V. A., Allshire, R., Levin, H. L. & Bahler, J., 1 Aug 2019

    Article in Molecular Biology and Evolution

  33. GORAB scaffolds COPI at the trans-Golgi for efficient enzyme recycling and correct protein glycosylation

    Witkos, T. M., Chan, W. L., Joensuu, M., Rhiel, M., Pallister, E., Thomas-Oates, J. E., Mould, P., Mironov, A. A., Biot, C., Guerardel, Y., Morelle, W., Ungar, D., Wieland, F. T., Jokitalo, E., Tassabehji, M., Kornak, U. & Lowe, M., 10 Jan 2019

    Article in Nature Communications

  34. Genome-wide selection footprints and deleterious variations in young Asian allotetraploid rapeseed

    Zou, J., Mao, L., Qiu, J., Wang, M., Jia, L., Wu, D., He, Z., Chen, M., Shen, Y., Shen, E., Huang, Y., Li, R., Hu, D., Shi, L., Wang, K., Zhu, Q-H., Ye, C., Bancroft, I., King, G. J., Meng, J. & 1 others, Fan, L., 1 Oct 2019

    Article in Plant biotechnology journal

  35. Genomic architecture and introgression shape a butterfly radiation

    Edelman, N., Frandsen, P., Miyagi, M., Clavijo, B., Davey, J. W., Dikow, R., García-Accinelli, G., Van Bellegham, S. M., Patterson, N., Neafsey, D. E., Challis, R. J., Kumar, S., Moreira, G. R. P., Salazar, C., Chouteau, M., Counterman, B. A., Papa, R., Blaxter, M., Reed, R. D., Dasmahapatra, K. K. & 9 others, Kronforst, M. R., Joron, M., Jiggins, C. D., McMillan, W. O., Di Palma, F., Blumberg, A. J., Wakeley, J., Jaffe, D. & Mallet, J., 1 Nov 2019

    Article in Science

  36. Geographic contrasts between pre- and postzygotic barriers are consistent with reinforcement in Heliconius butterflies.

    Rosser, N. S., Queste, L. M., Cama, B., Edelman, N., Mann, F., Mori Pezo, R., Morris, J., Segami, C., Velado, P., Schulz, S., Mallet, J. L. B. & Dasmahapatra, K. K., 1 Sep 2019

    Article in Evolution: international journal of organic evolution

  37. Going to extremes: The Goldilocks/Lagom principle and data distribution

    Leese, H. J., Sathyapalan, T., Allgar, V., Brison, D. R. & Sturmey, R., 27 Nov 2019

    Article in BMJ Open

  38. Heparan sulfates are critical regulators of the inhibitory megakaryocyte-platelet receptor G6b-B.

    Vögtle, T., Sharma, S., Mori, J., Nagy, Z., Semeniak, D., Scandola, C., Geer, M. J., Smith, C. W., Lane, J., Pollack, S., Lassila, R., Jouppila, A., Barr, A. J., Ogg, D. J., Howard, T. D., McMiken, H. J., Warwicker, J., Geh, C., Rowlinson, R., Abbott, W. M. & 8 others, Eckly, A., Schulze, H., Wright, G. J., Mazharian, A., Fütterer, K., Rajesh, S., Douglas, M. R. & Senis, Y. A., 22 Aug 2019

    Article in eLife

  39. Human Antibodies that Slow Erythrocyte Invasion Potentiate Malaria-Neutralizing Antibodies.

    Alanine, D. G. W., Quinkert, D., Kumarasingha, R., Mehmood, S., Donnellan, F. R., Minkah, N. K., Dadonaite, B., Diouf, A., Galaway, F., Silk, S. E., Jamwal, A., Marshall, J. M., Miura, K., Foquet, L., Elias, S. C., Labbé, G. M., Douglas, A. D., Jin, J., Payne, R. O., Illingworth, J. J. & 12 others, Pattinson, D. J., Pulido, D., Williams, B. G., de Jongh, W. A., Wright, G. J., Kappe, S. H. I., Robinson, C. V., Long, C. A., Crabb, B. S., Gilson, P. R., Higgins, M. K. & Draper, S. J., 27 Jun 2019

    Article in Cell

  40. Hypoxic changes to the urothelium as a bystander of end-stage bladder disease

    Radford, A. R., Hinley, J. S., Pilborough, A., Southgate, J. & Subramaniam, R., 15 Apr 2019

    Article in Journal of Pediatric Urology

  41. IPIP27 coordinates PtdIns(4,5)P2 homeostasis for successful cytokinesis

    Carim, S. C., Ben El Kadhi, K., Yan, G., Sweeney, S., Hickson, G. R., Carreno, S. & Lowe, M., 4 Mar 2019

    Article in Current Biology

  42. Identification of a novel orally bioavailable ERK5 inhibitor with selectivity over p38α and BRD4

    Tucker, J. A., Myers, S. M., Miller, D. C., Molyneux, L., Arasta, M., Bawn, R. H., Blackburn, T. J., Cook, S. J., Edwards, N., Endicott, J. A., Golding, B. T., Griffin, R. J., Hammonds, T., Hardcastle, I. R., Harnor, S. J., Heptinstall, A. B., Lochhead, P. A., Martin, M. P., Martin, N. C., Newell, D. R. & 10 others, Owen, P. J., Pang, L. C., Reuillon, T., Rigoreau, L. J. M., Thomas, H. D., Wang, L-Z., Wong, A-C., Noble, M. E. M., Wedge, S. R. & Cano, C., 15 Sep 2019

    Article in European Journal of Medicinal Chemistry

  43. Industry-Informed Workshops to Develop Graduate Skill Sets in the Circular Economy Using Systems Thinking

    Summerton, L., Clark, J. H., Hurst, G. A., Ball, P. D., Rylott, E. L., Carslaw, N., Creasey, J., Murray, J., Whitford, J., Dobson, B., Sneddon, H. F., Ross, J., Metcalf, P. & McElroy, C. R., 1 Nov 2019

    Article in JOURNAL OF CHEMICAL EDUCATION

  44. Initial Soil Microbiome Composition and Functioning Predetermine Future Plant Health

    Wei, Z., Gu, Y., Friman, V-P., Kowalchuk, G., Xu, Y., Shen, Q. & Jousset, A., 25 Sep 2019

    Article in Science Advances

  45. Insights into microbial community structure and diversity in oil palm waste compost

    Khalid, N. A., Rajandas, H., Parimannan, S., Croft, L. J., Loke, S., Chong, C. S., Bruce, N. C. & Yahya, A., 1 Oct 2019

    Article in 3 Biotech

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