Search research publications and outputs

  1. 2020
  2. Straw digestibility of Thai rice accessions

    Kophima, Y., Cheenacharoen, S., Simister, R., Gomez, L. D., McQueen-Mason, S. J. & Vuttipongchaikij, S., 30 Dec 2020

    Article in Agriculture and Natural Resources

  3. Triggering Closure of a Sialic Acid TRAP Transporter Substrate Binding Protein through Binding of Natural or Artificial Substrates

    Peter, M. F., Gebhardt, C., Glaenzer, J., Schneberger, N., de Boer, M., Thomas, G. H., Cordes, T. & Hagelueken, G., 28 Dec 2020, (E-pub ahead of print)

    Article in Journal of Molecular Biology

  4. Global impact of tobacco control policies on smokeless tobacco use: A systematic review protocol

    Arora, M., Chugh, A., Jain, N., Mishu, M., Boeckmann, M., Dahanayake, S., Eckhardt, J., Forberger, S., Huque, R., Kanaan, M., Khan, Z., Mehrotra, R., Rahman, M. A., Readshaw, A., Sheikh, A., Siddiqi, K., Vidyasagaran, A. & Dogar, O., 24 Dec 2020

    Article in BMJ Open

  5. Coexpressed subunits of dual genetic origin define a conserved supercomplex mediating essential protein import into chloroplasts

    Ramundo, S., Asakura, Y., Salomé, P. A., Strenkert, D., Boone, M., Mackinder, L., Takafuji, K., Dinc, E., Rahire, M., Crèvecoeur, M., Magneschi, L., Schaad, O., Hippler, M., Jonikas, M. C., Merchant, S. S., Nakai, M., Rochaix, J-D. & Walter, P., 22 Dec 2020

    Article in Proceedings of the National Academy of Sciences of the United States of America

  6. Systematic identification of P. falciparum sporozoite membrane protein interactions reveals an essential role for the p24 complex in host infection

    Knöcke, J., Dundas, K., Yang, A. S. P., Galaway, F., Metcalf, T., van Gemert, G-J., Sauerwein, R. W., Rayner, J. C., Billker, O. & Wright, G. J., 22 Dec 2020, (Accepted/In press)

    Article in Molecular and Cellular Proteomics

  7. Smallholder perceptions of land restoration activities: rewetting tropical peatland oil palm areas in Sumatra, Indonesia

    Ward, C. F. M., Stringer, L. C., Warren-Thomas, E. M., Agus, F., Crowson, M., Hamer, K. C., Hariyadi, B., Kartika, W. D., Lucey, J. M., McClean, C. J., Nurida, N. L., Petorelli, N., Saad, A., Andriyani, R., Ariani, T., Sriwahyuni, H. & Hill, J. K., 19 Dec 2020

    Article in Regional Environmental Change

  8. Evidence for shape coexistence and superdeformation in 24Mg

    Dowie, J. T. H., Kibédi, T., Jenkins, D. G., Stuchbery, A. E., Akber, A., Alshammari, H. A., Aoi, N., Avaa, A., Bignell, L. J., Chisapi, M. V., Coombes, B. J., Eriksen, T. K., Gerathy, M. S. M., Gray, T. J., Hoang, T. H., Ideguchi, E., Jones, P., Kumar Raju, M., Lane, G. J., McCormick, B. P. & 4 others, McKie, L. J., Mitchell, A. J., Spinks, N. J. & Tee, B. P. E., 10 Dec 2020

    Article in Physics Letters, Section B: Nuclear, Elementary Particle and High-Energy Physics

  9. Reliable, scalable functional genetics in bloodstream-form Trypanosoma congolense in vitro and in vivo

    Awuah-Mensah, G., McDonald, J., Steketee, P. C., Autheman, D., Whipple, S., D'Archivio, S., Brandt, C., Clare, S., Harcourt, K., Wright, G. J., Morrison, L. J., Gadelha, C. & Wickstead, B., 7 Dec 2020, (Accepted/In press)

    Article in PLOS PATHOGENS

  10. Selection of a subspecies-specific diterpene gene cluster implicated in rice disease resistance

    Zhan, C., Lei, L., Liu, Z., Zhou, S., Yang, C., Zhu, X., Guo, H., Zhang, F., Peng, M., Zhang, M., Li, Y., Yang, Z., Sun, Y., Shi, Y., Li, K., Liu, L., Shen, S., Wang, X., Li, Y., Czechowski, T. & 9 others, Hasegawa, M., Graham, I. A., Tohge, T., Qu, L., Liu, X., Fernie, A. R., Chen, L-L., Yuan, M. & Luo, J., 7 Dec 2020

    Article in Nature Plants

  11. Overcoming the trade-off between grain weight and number in wheat by the ectopic expression of expansin in developing seeds leads to increased yield potential

    Calderini, D. F., Castillo, F. M. C., Arenas-M, A., Molero, G., Reynolds, M. P., Craze, M., Bowden, S., Milner, M. J., Wallington, E. J., Dowle, A., Gomez, L. D. & McQueen Mason, S. J., 4 Dec 2020, (E-pub ahead of print)

    Article in The New phytologist

  12. Intestinal region-specific Wnt signalling profiles reveal interrelation between cell identity and oncogenic pathway activity in cancer development

    Adam, R. S., van Neerven, S. M., Pleguezuelos-Manzano, C., Simmini, S., Léveillé, N., de Groot, N. E., Holding, A. N., Markowetz, F. & Vermeulen, L., 3 Dec 2020

    Article in Cancer Cell International

  13. Mutational signature modelling in vitro recapitulates bladder cancer initiation

    Baker, S. C., Mason, A. S. & Southgate, J., 1 Dec 2020, Mutational signature modelling in vitro recapitulates bladder cancer initiation. 12 ed. Urologic Oncology Seminars and Original Investigations, Vol. 38. p. 909 1 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  14. Fetal glycosylation defect due to ALG3 and GOG5 variants detected via amniocentesis: complex glycosylation defect with embryonic lethal phenotype

    Ferrer, A., Tzovenos Starosta, R., Ranatunga, W., Ungar, D., Kozicz, T., Klee, E., Rust, L., Wick, M. & Morava, E., Dec 2020

    Article in Molecular genetics and metabolism

  15. Activation of the receptor tyrosine kinase RET improves long-term hematopoietic stem cell outgrowth and potency

    Grey, W. G., Chauhan, R., Piganeau, M., Huerga Encabo, H., Garcia-Albornoz, M., McDonald, N. Q. & Bonnet, D., 26 Nov 2020

    Article in Blood

  16. Competition Between Native and Non-native Plants

    Wandrag, L. & Catford, J., 20 Nov 2020, Plant invasions: the role of biotic interactions: The Role of Biotic Interactions. Traveset, A. & Richardson, D. M. (eds.). CABI, (CABI Invasives Series).

    Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)peer-review

  17. Insect egg-induced physiological changes and transcriptional reprogramming leading to gall development

    Oates, C. N., Denby, K., Myburg, A. A., Slippers, B. & Naidoo, S., 18 Nov 2020, (E-pub ahead of print)

    Article in Plant, Cell and Environment

  18. Find and fuse: Unsolved mysteries in sperm– egg recognition

    Bianchi, E. & Wright, G. J., 13 Nov 2020, (E-pub ahead of print)

    Article in PLoS Biology

  19. Single step syntheses of (1S)-aryl-tetrahydroisoquinolines by norcoclaurine synthases

    Lichman, B. R., Roddan, R., Sula, A., Fabiana, S., Mendez-Sanchez, D., Broomfield, J., Richter, M., Andexer, J., Ward, J. M., Keep, N. H. & Hailes, H. C., 13 Nov 2020

    Article in Communications Chemistry

  20. Assembly of the algal CO2-fixing organelle, the pyrenoid, is guided by a Rubisco-binding motif

    Meyer, M. T., Itakura, A. K., Patena, W., Wang, L., He, S., Emrich-Mills, T., Lau, C. S., Yates, G., Mackinder, L. & Jonikas, M. C., 11 Nov 2020, (E-pub ahead of print)

    Article in Science Advances

  21. The Amazon river is a suture zone for a polyphyletic group of co-mimetic heliconiine butterflies

    Rosser, N., Shirai, L. T., Dasmahapatra, K. K., Mallet, J. & Freitas, A. V. L., 10 Nov 2020, (E-pub ahead of print)

    Article in Ecography

  22. Low mannitol concentrations in Arabidopsis thaliana expressing Ectocarpus genes improve salt tolerance

    Rathor, P., Borza, T., Liu, Y., Qin, Y., Stone, S., Zhang, J., Hui, J. P. M., Berrue, F., Groisillier, A., Tonon, T., Yurgel, S., Potin, P. & Prithiviraj, B., 7 Nov 2020

    Article in Plants

  23. Environment, Economy and Subsistence: Landscape reconstruction

    Stratigos, M. J., 1 Nov 2020, Darkness Visible: The Sculptor's Cave, Covesea, from the Bronze Age to the Picts. Edinburgh: Society of Antiquaries of Scotland, p. 215-220 6 p.

    Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)peer-review

  24. Valorisation of natural resources and the need for economic and sustainability assessment: the case of cocoa pod husk in Indonesia.

    Picchioni, F., Warren, G. P. W., Lambert, S., Balcombe, K., Robinson, J. S., Srinivasan, C., Gomez, L. D., Faas, L., Westwood, N. J., Chatzifragkou, A., Charalampopoulos, D. & Shaw, L. J., 25 Oct 2020, (Accepted/In press)

    Article in Sustainability

  25. Identification of DHX9 as a cell cycle regulated nucleolar recruitment factor for CIZ1

    Thacker, U., Pauzaite, T., Tollitt, J., Twardowska, M., Harrison, C., Dowle, A., Coverley, D. & Copeland, N. A., 22 Oct 2020

    Article in Scientific Reports

  26. Role for the flagellum attachment zone in Leishmania anterior cell tip morphogenesis

    Halliday, C., Yanase, R., Catta-Preta, C. M. C., Moreira-Leite, F., Myskova, J., Pruzinova, K., Volf, P., Mottram, J. C. & Sunter, J. D., 22 Oct 2020, (E-pub ahead of print)

    Article in PLOS PATHOGENS

  27. Wing morphological responses to latitude and colonisation in a range expanding butterfly

    Taylor-Cox, E. D., MacGregor, C. J., Corthine, A., Hill, J. K., Hodgson, J. & Saccheri, I., 22 Oct 2020, (Accepted/In press)

    Article in Peer J

  28. CEN-tools: an integrative platform to identify the contexts of essential genes

    Sharma, S., Dincer, C., Weidemüller, P., Wright, G. J. & Petsalaki, E., 16 Oct 2020

    Article in Molecular systems biology

  29. Adaptation of the carbamoyl-phosphate synthetase (CPS) enzyme in an extremophile fish

    White, L., Sutton, G., Shechonge, A., Day, J., Dasmahapatra, K. K. & Pownall, B., 14 Oct 2020, (E-pub ahead of print)

    Article in Royal Society Open Science

  30. The clonal relation of primary upper urinary tract urothelial carcinoma and paired urothelial carcinoma of the bladder

    van Doeveren, T., Nakauma-Gonzalez, J. A., Mason, A. S., van Leenders, G. J. L. H., Zuiverloon, T. C. M., Zwarthoff, E. C., Meijssen, I. C., van der Made, A. C., van der Heijden, A. G., Hendricksen, K., van Rhijn, B. W. G., Voskuilen, C. S., van Riet, J., Dinjens, W. N. M., Dubbink, H. J., van de Werken, H. J. G. & Boormans, J. L., 13 Oct 2020

    Article in International Journal of Cancer

  31. Association mapping identifies quantitative trait loci (QTL) for digestibility in rice straw

    Nguyen, D. T., Gomez, L. D., Harper, A. L., Halpin, C., Waugh, R., Simister, R., Whitehead, C., Oakley, H., Nguyen, H. T., Nguyen, T. V., Duong, T. X. & McQueen Mason, S. J., 8 Oct 2020

    Article in Biotechnology for biofuels

  32. Uncovering a novel molecular mechanism for scavenging sialic acids in bacteria

    Bell, A., Severi, E., Lee, M., Monaco, S., Latousakis, D., Angulo, J., Thomas, G. H., Naismith, J. & Juge, N., 2 Oct 2020

    Article in Journal of Biological Chemistry

  33. Targeting the trypanosome kinetochore with CLK1 protein kinase inhibitors

    Saldivia Concepcion, M. A., Fang, E., Ma, X., Myburgh, E., Brambilla Carnielli Trindade, J., Bower-Lepts, C., Brown, E., Ritchie, R., Lakshminarayana, S. B., Chen, Y-L., Patra, D., Ornelas, E., Koh, H. X. Y., Williams, S., Supek, F., Paape, D., McCulloch, R., Kaiser, M., Barrett, M. P., Jiricek, J. & 3 others, Diagana, T. T., Mottram, J. C. & Rao, S. P. S., Oct 2020

    Article in Nature Microbiology

  34. Cytotoxic (cis,cis-1,3,5-triaminocyclohexane)ruthenium(II)–diphosphine complexes; evidence for covalent binding and intercalation with DNA

    Wise, D. E., Gamble, A. J., Arkawazi, S., Walton, P. H., Galan, M. C., O’Hagan, M. P., Hogg, K., Marrison, J., O'Toole, P. J., Sparkes, H. A., Lynam, J. M. & Pringle, P. G., 30 Sep 2020, (E-pub ahead of print)

    Article in Dalton Transactions

  35. Open system pingos as hotspots for sub-permafrost methane emission in Svalbard

    Hodson, A., Nowak, A., Hornum, M. T., Senger, K., Redeker, K. R., Christiansen, H. H., Jessen, S., Betlem, P., Thornton, S. F., Turchyn, A. V., Olaussen, S. & Marca, A., 24 Sep 2020, (Accepted/In press)

    Article in Cryosphere

  36. PsAA9A, a C1-specific AA9 lytic polysaccharide monooxigenase from the white-rot basidiomycete Pycnoporus sanguineus

    Garrido, M. M., Landon, M., Sabbadin, F., Valacco, M. P., Couto, A., Bruce, N. C., Wirth, S. A. & Campos, E., 23 Sep 2020

    Article in APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

  37. The Mechanism of Vesicle Solubilization by the Detergent Sodium Dodecyl Sulfate

    Juan-Colas, J., Dresser, L., Morris, K., Lagadou, H., Ward, R. H., Burns, A., Tear, S., Johnson, S. D., Leake, M. C. & Quinn, S., 21 Sep 2020, (E-pub ahead of print)

    Article in Langmuir

  38. Transcriptomics predicts compound synergy in drug and natural product treated glioblastoma cells

    Pruteanu, L-L., Kopanitsa, L., Módos, D., Kletnieks, E., Samarova, E., Bender, A., Gomez, L. D. & Bailey, D. S., 18 Sep 2020

    Article in PLoS ONE

  39. Fine scale spatial investigation of multiple insecticide resistance and underlying target-site and metabolic mechanisms in Anopheles gambiae in central Côte d’Ivoire

    Oumbouke, W. A., Pignatelli, P., Barreaux, A. M. G., Tia, I. Z., Koffi, A. A., Ahoua Alou, L. P., Sternberg, E. D., Thomas, M. B., Weetman, D. & N’Guessan, R., 15 Sep 2020

    Article in Scientific Reports

  40. Overexpression of Placental Growth Factor in Stromal Cells from Benign Prostatic Hyperplasia: Another Piece in the Puzzle?

    Devlin, C., Frame, F. M., Archer, L., Mann, V. M., Walker, H., Simms, M. S., Berney, D. M., Collins, A. & Maitland, N. J., 14 Sep 2020, (E-pub ahead of print)

    Article in European Urology Open Science

  41. A Salmochelin S4-inspired Ciprofloxacin Trojan Horse Conjugate

    Sanderson, T., Black, C., Southwell, J., Wilde, E., Pandey, A., Herman, R., Thomas, G. H., Boros, E., Duhme-Klair, A. K. & Routledge, A., 11 Sep 2020

    Article in ACS Infectious Diseases

  42. The Structure of the Cysteine-Rich Domain of Plasmodium falciparum P113 Identifies the Location of the RH5 Binding Site.

    Campeotto, I., Galaway, F., Mehmood, S., Barfod, L. K., Quinkert, D., Kotraiah, V., Phares, T. W., Wright, K. E., Snijders, A. P., Draper, S. J., Higgins, M. K. & Wright, G. J., 8 Sep 2020

    Article in MBio

  43. Benign Prostatic Hyperplasia- what do we know?

    Devlin, C. M., Simms, M. S. & Maitland, N. J., 7 Sep 2020, (E-pub ahead of print)

    Article in BJU International

  44. The Salmonella enterica serovar Typhimurium virulence factor STM3169 is a hexuronic acid binding protein component of a TRAP transporter

    Herman, R., Bennett-Ness, C., Maqbool, A., Afzal, A., Leech, A. & Thomas, G. H., 7 Sep 2020, (E-pub ahead of print)

    Article in Microbiology

  45. Deep convergence, shared ancestry and evolutionary novelty in the genetic architecture of heliconius mimicry

    Morris, J., Hanly, J. J., Martin, S. H., Van Belleghem, S. M., Salazar, C., Jiggins, C. D. & Dasmahapatra, K. K., 3 Sep 2020, (E-pub ahead of print)

    Article in Genetics

  46. Senna reticulata: a viable option for bioenergy production in the Amazonian region

    Grandis, A., Arenque-Musa, B. C., Martins, M. C. M., Maciel, T. O., Simister, R., Gomez, L. D. & Buckeridge, M. S., 29 Aug 2020

    Article in BioEnergy Research

  47. A curated list of genes that affect the plant ionome

    Whitt, L., Ricachenevsky, F. K., Ziegler, G., Clemens, S., Walker, E., Maathuis, F., Kear, P. & Baxter, I., 28 Aug 2020, (Accepted/In press)

    Article in Plant Direct

  48. Identification of mesenchymal stromal cell survival responses to antimicrobial silver ion concentrations released from orthopaedic implants

    Souter, P., Vaughan, J., Butcher, K., Dowle, A., Cunningham, J. C., Dodd, J., Hall, M., Wilson, D., Horner, A. & Genever, P., 27 Aug 2020, (Accepted/In press)

    Article in Scientific Reports

  49. Biocatalytic Transfer of Pseudaminic Acid (Pse5Ac7Ac) Using Promiscuous Sialyltransferases in a Chemoenzymatic Approach to Pse5Ac7Ac Containing Glycosides

    Flack, E., Chidwick, H., Guchhait, G., Keenan, T., Budhadev, D., Huang, K., Both, P., Mas Pons, J., Ledru, H., Rui, S., Stafford, G., Shaw, J., Galan, M. C., Flitsch, S. L., Thomas, G. H. & Fascione, M. A., 21 Aug 2020, (E-pub ahead of print)

    Article in ACS Catalysis

  50. Cell wall remodeling under salt stress: Insights into changes in polysaccharides, feruloylation, lignification, and phenolic metabolism in maize

    Oliveira, D. M., Mota, T. R., Salatta, F. V., Sinzker, R. C., Končitíková, R., Kopečný, D., Simister, R., Silva, M., Goeminne, G., Morreel, K., Rencoret, J., Gutiérrez, A., Tryfona, T., Marchiosi, R., Dupree, P., Del Río, J. C., Boerjan, W., McQueen-Mason, S. J., Gomez, L. D., Ferrarese-Filho, O. & 1 others, Dos Santos, W. D., 20 Aug 2020

    Article in Plant, Cell and Environment

  51. STAT3 inhibition with galiellalactone effectively targets the prostate cancer stem-like cell population

    Canesin, G., Maggio, V., Palominos, M., Stiehm, A., Contreras, H. R., Castellón, E. A., Morote, J., Paciucci, R., Maitland, N. J., Bjartell, A. & Hellsten, R., 18 Aug 2020

    Article in Scientific Reports

  52. SerraNA: a program to determine nucleic acids elasticity from simulation data

    Velasco Berrelleza, V., Burman, M., Shepherd, J., Leake, M. C., Golestanian, R. & Noy, A., 17 Aug 2020, (E-pub ahead of print)

    Article in Physical Chemistry Chemical Physics

  53. Untapped resources for medical research

    Perez-Escobar, O. A., Richardson, J. E., Howes, M-J. R., Lucas, E., Alvarez de Roman, N., Collemare, J., Graham, I. A., Gratzfeld, J., Kersey, P. J., Leitch, I. J., Paton, A., Hollingsworth, P. J. & Antonelli, A., 14 Aug 2020

    Comment/debate in Science

  54. Downy Mildew effector HaRxL21 interacts with the transcriptional repressor TOPLESS to promote pathogen susceptibility

    Harvey, S. E., Kumari, P., Lapin, D., Griebel, T., Hickman, R., Guo, W., Zhang, R., Parker, J. E., Beynon, J., Denby, K. & Steinbrenner, J., 12 Aug 2020

    Article in PLOS PATHOGENS

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