Search research publications and outputs

  1. 2020
  2. Straw digestibility of Thai rice accessions

    Kophima, Y., Cheenacharoen, S., Simister, R., Gomez, L. D., McQueen-Mason, S. J. & Vuttipongchaikij, S., 30 Dec 2020

    Article in Agriculture and Natural Resources

  3. Global impact of tobacco control policies on smokeless tobacco use: A systematic review protocol

    Arora, M., Chugh, A., Jain, N., Mishu, M., Boeckmann, M., Dahanayake, S., Eckhardt, J., Forberger, S., Huque, R., Kanaan, M., Khan, Z., Mehrotra, R., Rahman, M. A., Readshaw, A., Sheikh, A., Siddiqi, K., Vidyasagaran, A. & Dogar, O., 24 Dec 2020

    Article in BMJ Open

  4. Coexpressed subunits of dual genetic origin define a conserved supercomplex mediating essential protein import into chloroplasts

    Ramundo, S., Asakura, Y., Salomé, P. A., Strenkert, D., Boone, M., Mackinder, L., Takafuji, K., Dinc, E., Rahire, M., Crèvecoeur, M., Magneschi, L., Schaad, O., Hippler, M., Jonikas, M. C., Merchant, S. S., Nakai, M., Rochaix, J-D. & Walter, P., 22 Dec 2020

    Article in Proceedings of the National Academy of Sciences of the United States of America

  5. Smallholder perceptions of land restoration activities: rewetting tropical peatland oil palm areas in Sumatra, Indonesia

    Ward, C. F. M., Stringer, L. C., Warren-Thomas, E. M., Agus, F., Crowson, M., Hamer, K. C., Hariyadi, B., Kartika, W. D., Lucey, J. M., McClean, C. J., Nurida, N. L., Petorelli, N., Saad, A., Andriyani, R., Ariani, T., Sriwahyuni, H. & Hill, J. K., 19 Dec 2020

    Article in Regional Environmental Change

  6. Evidence for shape coexistence and superdeformation in 24Mg

    Dowie, J. T. H., Kibédi, T., Jenkins, D. G., Stuchbery, A. E., Akber, A., Alshammari, H. A., Aoi, N., Avaa, A., Bignell, L. J., Chisapi, M. V., Coombes, B. J., Eriksen, T. K., Gerathy, M. S. M., Gray, T. J., Hoang, T. H., Ideguchi, E., Jones, P., Kumar Raju, M., Lane, G. J., McCormick, B. P. & 4 others, McKie, L. J., Mitchell, A. J., Spinks, N. J. & Tee, B. P. E., 10 Dec 2020

    Article in Physics Letters, Section B: Nuclear, Elementary Particle and High-Energy Physics

  7. Selection of a subspecies-specific diterpene gene cluster implicated in rice disease resistance

    Zhan, C., Lei, L., Liu, Z., Zhou, S., Yang, C., Zhu, X., Guo, H., Zhang, F., Peng, M., Zhang, M., Li, Y., Yang, Z., Sun, Y., Shi, Y., Li, K., Liu, L., Shen, S., Wang, X., Li, Y., Czechowski, T. & 9 others, Hasegawa, M., Graham, I. A., Tohge, T., Qu, L., Liu, X., Fernie, A. R., Chen, L-L., Yuan, M. & Luo, J., 7 Dec 2020

    Article in Nature Plants

  8. Intestinal region-specific Wnt signalling profiles reveal interrelation between cell identity and oncogenic pathway activity in cancer development

    Adam, R. S., van Neerven, S. M., Pleguezuelos-Manzano, C., Simmini, S., Léveillé, N., de Groot, N. E., Holding, A. N., Markowetz, F. & Vermeulen, L., 3 Dec 2020

    Article in Cancer Cell International

  9. Mutational signature modelling in vitro recapitulates bladder cancer initiation

    Baker, S. C., Mason, A. S. & Southgate, J., 1 Dec 2020, Mutational signature modelling in vitro recapitulates bladder cancer initiation. 12 ed. Urologic Oncology Seminars and Original Investigations, Vol. 38. p. 909 1 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  10. Fetal glycosylation defect due to ALG3 and GOG5 variants detected via amniocentesis: complex glycosylation defect with embryonic lethal phenotype

    Ferrer, A., Tzovenos Starosta, R., Ranatunga, W., Ungar, D., Kozicz, T., Klee, E., Rust, L., Wick, M. & Morava, E., Dec 2020

    Article in Molecular genetics and metabolism

  11. Activation of the receptor tyrosine kinase RET improves long-term hematopoietic stem cell outgrowth and potency

    Grey, W. G., Chauhan, R., Piganeau, M., Huerga Encabo, H., Garcia-Albornoz, M., McDonald, N. Q. & Bonnet, D., 26 Nov 2020

    Article in Blood

  12. Competition Between Native and Non-native Plants

    Wandrag, L. & Catford, J., 20 Nov 2020, Plant invasions: the role of biotic interactions: The Role of Biotic Interactions. Traveset, A. & Richardson, D. M. (eds.). CABI, (CABI Invasives Series).

    Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)peer-review

  13. Single step syntheses of (1S)-aryl-tetrahydroisoquinolines by norcoclaurine synthases

    Lichman, B. R., Roddan, R., Sula, A., Fabiana, S., Mendez-Sanchez, D., Broomfield, J., Richter, M., Andexer, J., Ward, J. M., Keep, N. H. & Hailes, H. C., 13 Nov 2020

    Article in Communications Chemistry

  14. Low mannitol concentrations in Arabidopsis thaliana expressing Ectocarpus genes improve salt tolerance

    Rathor, P., Borza, T., Liu, Y., Qin, Y., Stone, S., Zhang, J., Hui, J. P. M., Berrue, F., Groisillier, A., Tonon, T., Yurgel, S., Potin, P. & Prithiviraj, B., 7 Nov 2020

    Article in Plants

  15. Environment, Economy and Subsistence: Landscape reconstruction

    Stratigos, M. J., 1 Nov 2020, Darkness Visible: The Sculptor's Cave, Covesea, from the Bronze Age to the Picts. Edinburgh: Society of Antiquaries of Scotland, p. 215-220 6 p.

    Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)peer-review

  16. Identification of DHX9 as a cell cycle regulated nucleolar recruitment factor for CIZ1

    Thacker, U., Pauzaite, T., Tollitt, J., Twardowska, M., Harrison, C., Dowle, A., Coverley, D. & Copeland, N. A., 22 Oct 2020

    Article in Scientific Reports

  17. CEN-tools: an integrative platform to identify the contexts of essential genes

    Sharma, S., Dincer, C., Weidemüller, P., Wright, G. J. & Petsalaki, E., 16 Oct 2020

    Article in Molecular systems biology

  18. The clonal relation of primary upper urinary tract urothelial carcinoma and paired urothelial carcinoma of the bladder

    van Doeveren, T., Nakauma-Gonzalez, J. A., Mason, A. S., van Leenders, G. J. L. H., Zuiverloon, T. C. M., Zwarthoff, E. C., Meijssen, I. C., van der Made, A. C., van der Heijden, A. G., Hendricksen, K., van Rhijn, B. W. G., Voskuilen, C. S., van Riet, J., Dinjens, W. N. M., Dubbink, H. J., van de Werken, H. J. G. & Boormans, J. L., 13 Oct 2020

    Article in International Journal of Cancer

  19. Association mapping identifies quantitative trait loci (QTL) for digestibility in rice straw

    Nguyen, D. T., Gomez, L. D., Harper, A. L., Halpin, C., Waugh, R., Simister, R., Whitehead, C., Oakley, H., Nguyen, H. T., Nguyen, T. V., Duong, T. X. & McQueen Mason, S. J., 8 Oct 2020

    Article in Biotechnology for biofuels

  20. Uncovering a novel molecular mechanism for scavenging sialic acids in bacteria

    Bell, A., Severi, E., Lee, M., Monaco, S., Latousakis, D., Angulo, J., Thomas, G. H., Naismith, J. & Juge, N., 2 Oct 2020

    Article in Journal of Biological Chemistry

  21. Targeting the trypanosome kinetochore with CLK1 protein kinase inhibitors

    Saldivia Concepcion, M. A., Fang, E., Ma, X., Myburgh, E., Brambilla Carnielli Trindade, J., Bower-Lepts, C., Brown, E., Ritchie, R., Lakshminarayana, S. B., Chen, Y-L., Patra, D., Ornelas, E., Koh, H. X. Y., Williams, S., Supek, F., Paape, D., McCulloch, R., Kaiser, M., Barrett, M. P., Jiricek, J. & 3 others, Diagana, T. T., Mottram, J. C. & Rao, S. P. S., Oct 2020

    Article in Nature Microbiology

  22. PsAA9A, a C1-specific AA9 lytic polysaccharide monooxigenase from the white-rot basidiomycete Pycnoporus sanguineus

    Garrido, M. M., Landon, M., Sabbadin, F., Valacco, M. P., Couto, A., Bruce, N. C., Wirth, S. A. & Campos, E., 23 Sep 2020

    Article in APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

  23. Transcriptomics predicts compound synergy in drug and natural product treated glioblastoma cells

    Pruteanu, L-L., Kopanitsa, L., Módos, D., Kletnieks, E., Samarova, E., Bender, A., Gomez, L. D. & Bailey, D. S., 18 Sep 2020

    Article in PLoS ONE

  24. Fine scale spatial investigation of multiple insecticide resistance and underlying target-site and metabolic mechanisms in Anopheles gambiae in central Côte d’Ivoire

    Oumbouke, W. A., Pignatelli, P., Barreaux, A. M. G., Tia, I. Z., Koffi, A. A., Ahoua Alou, L. P., Sternberg, E. D., Thomas, M. B., Weetman, D. & N’Guessan, R., 15 Sep 2020

    Article in Scientific Reports

  25. A Salmochelin S4-inspired Ciprofloxacin Trojan Horse Conjugate

    Sanderson, T., Black, C., Southwell, J., Wilde, E., Pandey, A., Herman, R., Thomas, G. H., Boros, E., Duhme-Klair, A. K. & Routledge, A., 11 Sep 2020

    Article in ACS Infectious Diseases

  26. The Structure of the Cysteine-Rich Domain of Plasmodium falciparum P113 Identifies the Location of the RH5 Binding Site.

    Campeotto, I., Galaway, F., Mehmood, S., Barfod, L. K., Quinkert, D., Kotraiah, V., Phares, T. W., Wright, K. E., Snijders, A. P., Draper, S. J., Higgins, M. K. & Wright, G. J., 8 Sep 2020

    Article in MBio

  27. Senna reticulata: a viable option for bioenergy production in the Amazonian region

    Grandis, A., Arenque-Musa, B. C., Martins, M. C. M., Maciel, T. O., Simister, R., Gomez, L. D. & Buckeridge, M. S., 29 Aug 2020

    Article in BioEnergy Research

  28. Cell wall remodeling under salt stress: Insights into changes in polysaccharides, feruloylation, lignification, and phenolic metabolism in maize

    Oliveira, D. M., Mota, T. R., Salatta, F. V., Sinzker, R. C., Končitíková, R., Kopečný, D., Simister, R., Silva, M., Goeminne, G., Morreel, K., Rencoret, J., Gutiérrez, A., Tryfona, T., Marchiosi, R., Dupree, P., Del Río, J. C., Boerjan, W., McQueen-Mason, S. J., Gomez, L. D., Ferrarese-Filho, O. & 1 others, Dos Santos, W. D., 20 Aug 2020

    Article in Plant, Cell and Environment

  29. STAT3 inhibition with galiellalactone effectively targets the prostate cancer stem-like cell population

    Canesin, G., Maggio, V., Palominos, M., Stiehm, A., Contreras, H. R., Castellón, E. A., Morote, J., Paciucci, R., Maitland, N. J., Bjartell, A. & Hellsten, R., 18 Aug 2020

    Article in Scientific Reports

  30. Untapped resources for medical research

    Perez-Escobar, O. A., Richardson, J. E., Howes, M-J. R., Lucas, E., Alvarez de Roman, N., Collemare, J., Graham, I. A., Gratzfeld, J., Kersey, P. J., Leitch, I. J., Paton, A., Hollingsworth, P. J. & Antonelli, A., 14 Aug 2020

    Comment/debate in Science

  31. Downy Mildew effector HaRxL21 interacts with the transcriptional repressor TOPLESS to promote pathogen susceptibility

    Harvey, S. E., Kumari, P., Lapin, D., Griebel, T., Hickman, R., Guo, W., Zhang, R., Parker, J. E., Beynon, J., Denby, K. & Steinbrenner, J., 12 Aug 2020

    Article in PLOS PATHOGENS

  32. A high-contiguity Brassica nigra genome localizes active centromeres and defines the ancestral Brassica genome

    Sampath, P., Koh, C. S., Jin, L., Buchwaldt, M., Higgins, E. E., Zheng, C., Sankoff, D., Robinson, S. J., Kagale, S., Navabi, Z-K., Tang, L., Horner, K. N., He, Z., Bancroft, I., Chalhoub, B., Sharpe, A. G. & Parkin, I. A. P., 10 Aug 2020

    Article in Nature Plants

  33. Conservation set-asides improve carbon storage and support associated plant diversity in certified sustainable oil palm plantations  

    Fleiss, S., Waddell, E., Ola, B. B., Banin, L. F., Benedick, S., Sailim, A. B., Chapman, D. S., Jelling, A., King, H., McClean, C. J., Yeong, K. L. & Hill, J. K., Aug 2020

    Article in Biological Conservation

  34. Author Correction: The dental proteome of Homo antecessor (Nature, (2020), 580, 7802, (235-238), 10.1038/s41586-020-2153-8)

    Welker, F., Ramos-Madrigal, J., Gutenbrunner, P., Mackie, M., Tiwary, S., Jersie-Christensen, R. R., Chiva, C., Dickinson, M. R., Kuhlwilm, M., de Manuel, M., Gelabert, P., Martinón-Torres, M., Margvelashvili, A., Arsuaga, J. L., Carbonell, E., Marques-Bonet, T., Penkman, K., Sabidó, E., Cox, J., Olsen, J. V. & 6 others, Lordkipanidze, D., Racimo, F., Lalueza-Fox, C., de Castro, J. M. B., Willerslev, E. & Cappellini, E., 29 Jul 2020

    Comment/debate in Nature

  35. Disparities in the analysis of morphological disparity

    Guillerme, T., Cooper, N., Brusatte, S. L., Davis, K. E., Jackson, A. L., Gerber, S., Goswami, A., Healy, K., Hopkins, M. J., Jones, M. E. H., Lloyd, G. T., O'Reilly, J. E., Pate, A., Puttick, M. N., Rayfield, E. J., Saupe, E. E., Sherratt, E., Slater, G. J., Weisbecker, V., Thomas, G. H. & 1 others, Donoghue, P. C. J., 29 Jul 2020

    Review article in Biology letters

  36. Caste: Worker Polyethism in the Social Hymenoptera

    Robinson, E. J. H. & Jandt, J., 26 Jul 2020, Encyclopedia of Social Insects. Chris K., S. (ed.). Springer

    Research output: Chapter in Book/Report/Conference proceedingEntry for encyclopedia/dictionary

  37. Novel Thienopyrimidine Inhibitors of Leishmania N-Myristoyltransferase with On-Target Activity in Intracellular Amastigotes

    Bell, A. S., Yu, Z., Hutton, J. A., Wright, M. H., Brannigan, J. A., Paape, D., Roberts, S. M., Sutherell, C. L., Ritzefeld, M., Wilkinson, A. J., Smith, D. F., Leatherbarrow, R. J. & Tate, E. W., 23 Jul 2020

    Article in JOURNAL OF MEDICINAL CHEMISTRY

  38. B-cell Zone Reticular Cell Microenvironments Shape CXCL13 Gradient Formation

    Coles, M. C., O'Toole, P. J., Lacey, C. J. N., Cosgrove, J., Novkovic, M., Albrecht, S., Zhou, Z., Pikor, N. B., Onder, L., Morbe, U., Cupovic, J., Miller, H., Alden, K. J., Thuery, A. L. M. I., Pinter, R., Jarrett, S., Taylor, E., Venetz, D., Heller, M., Uguccioni, M. & 11 others, Legler, D. F., Coatesworth, A., Polak, W. G., Cupedo, T., Manoury, B., Thelen, M., Stein, J. V., Wolf, M., Leake, M. C., Timmis, J. & Ludewig, B., 22 Jul 2020

    Article in Nature Communications

  39. Isoprostanoid profiling of marine microalgae

    Vigor, C., Oger, C., Reversat, G., Rocher, A., Zhou, B., Linares-Maurizi, A., Guy, A., Bultel-Ponce, V., Galano, J-M., Vercauteren, J., Durand, T., Potin, P., Tonon, T. & Leblanc, C., 18 Jul 2020

    Article in Biomolecules

  40. Multi-decadal changes in mangrove extent, age and species in the Red River Estuaries of Viet Nam

    Quang, N. H., Quinn, C. H., Stringer, L. C., Carrie, R., Hackney, C. R., Van Hue, L. T., Tan, D. V. & Thanh Nga, P. T., 16 Jul 2020

    Article in Remote Sensing

  41. EGF signaling in bowel carcinoma cells utilizes higher order architectures of EGFR and HER2

    Wollman, A., Llorente-Garcia, I., Fournier, C., Harriman, O. L., Hargreaves, A., Shashkova, S., Ouaret, D., Zhou, P., Liu, T-C., Wilding, J., Kusumi, A., Bodmer, W. & Leake, M. C., 12 Jul 2020, bioRxiv, at Cold Spring Harbor Laboratory.

    Research output: Working paper

  42. The Role of Vector Trait Variation in Vector-Borne Disease Dynamics

    Cator, L. J., Johnson, L. R., Mordecai, E. A., El Moustaid, F., Smallwood, T. R. C., LaDeau, S. L., Johansson, M. A., Hudson, P. J., Boots, M., Thomas, M. B., Power, A. G. & Pawar, S., 10 Jul 2020

    Review article in Frontiers in Ecology and Evolution

  43. Experimentally assessing the effect of search effort on snare detectability

    Ibbett, H., Milner-Gulland, EJ., Beale, C. M., Dobson, A., Griffin, O., O'Kelly, H. J. & Keane, A., Jul 2020

    Article in Biological Conservation

  44. The influence of feeding behaviour and temperature on the capacity of mosquitoes to transmit malaria

    Suh, E., Grossman, M. K., Waite, J. L., Dennington, N. L., Sherrard-Smith, E., Churcher, T. S. & Thomas, M. B., Jul 2020

    Article in Nature Ecology and Evolution

  45. Global Transcriptomic Responses of Roseithermus sacchariphilus Strain RA in Media Supplemented with Beechwood Xylan

    Liew, K. J., Bruce, N. C., Sani, R. K., Chong, C. S., Yaakop, A. S., Shamsir, M. S. & Goh, K. M., 29 Jun 2020

    Article in Microorganisms

  46. Joint Selenium-Iodine Supply and Arbuscular Mycorrhizal Fungi Inoculation Affect Yield and Quality of Chickpea Seeds and Residual Biomass

    Golubkina, N., Gomez, L. D., Kekina, H., Cozzolino, E., Simister, R., Tallarita, A., Torino, V., Koshevarov, A., Cuciniello, A., Maiello, R., Cenvinzo, V. & Caruso, G., 27 Jun 2020

    Article in Plants

  47. A Brassica napus Reductase Gene Dissected by Associative Transcriptomics Enhances Plant Adaption to Freezing Stress

    Huang, Y., Hussain, M. A., Luo, D., Xu, H., Zeng, C., Havlickova, L., Bancroft, I., Tian, Z., Zhang, X., Cheng, Y., Zou, X., Lu, G. & Lv, Y., 26 Jun 2020

    Article in Frontiers in Plant Science

  48. Human GBP1 binds LPS to initiate assembly of a caspase-4 activating platform on cytosolic bacteria

    Santos, J. C., Boucher, D., Schneider, L. K., Demarco, B., Dilucca, M., Shkarina, K., Heilig, R., Chen, K. W., Lim, R. Y. H. & Broz, P., 24 Jun 2020

    Article in Nature Communications

  49. Cost, risk and avoidance of inbreeding in a cooperatively breeding bird

    Leedale, A., Simeoni, M., Sharp, S. P., Green, J. P., Slate, J., Lachlan, R., Robinson, E. J. H. & Hatchwell, B., 22 Jun 2020

    Article in Proceedings of the National Academy of Sciences USA

  50. Screening of a library of recombinant Schistosoma mansoni proteins with sera from murine and human controlled infections identifies early serological markers.

    Crosnier, C., Hokke, C. H., Protasio, A. V., Brandt, C., Rinaldi, G., Langenberg, M. C. C., Clare, S., Janse, J. J., Wilson, S., Berriman, M., Roestenberg, M. & Wright, G. J., 10 Jun 2020

    Article in The Journal of Infectious Diseases

  51. p53-dependent polyploidisation after DNA damage in G2 phase

    Middleton, A., Suman, R., O'Toole, P. J., Akopyan, K. & Lindqvist, A., 10 Jun 2020, bioRxiv, at Cold Spring Harbor Laboratory, (bioRxiv).

    Research output: Working paperPreprint

  52. Novel markers for high-throughput protoplast-based analyses of phytohormone signaling

    Lehmann, S., Dominguez-Ferreras, A., Huang, W-J., Denby, K., Ntoukakis, V. & Schäfer, P., 4 Jun 2020

    Article in PLOS one

  53. PRMT7 regulates RNA-binding capacity and protein stability in Leishmania parasites

    Ferreira, T. R., Dowle, A. A., Parry, E., Alves-Ferreira, E. V. C., Hogg, K., Kolokousi, F., Larson, T. R., Plevin, M. J., Cruz, A. K. & Walrad, P. B., 4 Jun 2020

    Article in Nucleic Acids Research

  54. TMEM95 is a sperm membrane protein essential for mammalian fertilization.

    Lamas-Toranzo, I., Hamze, J. G., Bianchi, E., Fernández-Fuertes, B., Pérez-Cerezales, S., Laguna-Barraza, R., Fernández-González, R., Lonergan, P., Gutiérrez-Adán, A., Wright, G. J., Jiménez-Movilla, M. & Bermejo-Álvarez, P., 2 Jun 2020

    Article in eLife

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