Search research publications and outputs

  1. 2022
  2. Flexible and digestible wood caused by viral-induced alteration of cell wall composition

    Allen, H., Zeef, L., Morreel, K., Goeminne, G., Kumar, M., Gomez, L. D., Dean, A. P., Eckmann, A., Casiraghi, C., McQueen-Mason, S. J., Boerjan, W. & Turner, S. R., 17 Jun 2022, (E-pub ahead of print)

    Article in Current Biology

  3. Identification of genetic loci in lettuce mediating quantitative resistance to fungal pathogens

    Pink, H., Talbot, A., Graceson, A., Graham, J., Higgins, G., Taylor, A., Jackson, A. C., Truco, M., Michelmore, R., Yao, C., Gawthrop, F., Pink, D., Hand, P., Clarkson, J. P. & Denby, K., 8 Jun 2022, (E-pub ahead of print)

    Article in TAG Theoretical and applied genetics

  4. Weak edge effects on trees in Bornean rainforest remnants bordering oil palm

    Anderson, J. A., McClean, C. J., Sim, S., Pettorelli, N., Jelling, A., Tangah, J. & Hill, J. K., 7 Jun 2022, (E-pub ahead of print)

    Article in Biotropica

  5. What are mycorrhizal traits?

    Chaudhary, V. B., Holland, E. P., Charman-Anderson, S., Guzman, A., Bell-Dereske, L., Cheeke, T. E., Corrales, A., Duchicela, J., Egan, C., Gupta, M. M., Hannula, S. E., Hestrin, R., Hoosein, S., Kumar, A., Mhretu, G., Neuenkamp, L., Soti, P., Xie, Y. & Helgason, T., 7 Jun 2022, (E-pub ahead of print)

    Article in Trends in Ecology & Evolution

  6. The effects of prenatal smoke exposure on language development- a systematic review

    Peixinho, J., Toseeb, U., Mountford, H. S., Bermudez, I. & Newbury, D. F., 6 May 2022, (E-pub ahead of print)

    Article in Infant and child development

  7. Dataset of high-throughput ligand screening against the RNA Packaging Signals regulating Hepatitis B Virus nucleocapsid formation

    Abulwerdi, F., Fatehi Chenar, F., Manfield, I., Le Grice, S., Schneekloth, Jr., J. S., Twarock, R., Stockley, P. G. & Patel, N., 29 Apr 2022, (E-pub ahead of print)

    Article in Data in Brief

  8. Parallel Optimisation of Potency and Pharmacokinetics Leading to the Discovery of a Pyrrole Carboxamide ERK5 Chemical Tool

    Miller, D. C., Reuillon, T., Molyneux, L., Blackburn, T. J., Cook, S., Edwards, N., Endicott, J. A., Golding, B. T., Griffin, R. J., Hardcastle, I. R., Heptinstall, A. B., Lochhead, P., Martin, M. P., Martin, N., Myers, S. M., Newell, D. R., Noble, R., Rigoreau, L. J. M., Thomas, H., Tucker, J. A. & 6 others, Wang, L-Z., Waring, M. J., Wong, A-C., Wedge, S., Noble, M. & Cano, C., 25 Apr 2022, (E-pub ahead of print)

    Article in JOURNAL OF MEDICINAL CHEMISTRY

  9. Sodium accumulation in breast cancer predicts malignancy and treatment response

    James, A. D., Leslie, T. K., Kaggie, J. D., Wiggins, L., Patten, L., Murphy O'Duinn, J., Langer, S., Labarthe, M-C., Riemer, F., Baxter, G., McLean, M. A., Gilbert, F. J., Kennerley, A. J. & Brackenbury, W. J., 25 Apr 2022, (E-pub ahead of print)

    Article in British journal of cancer

  10. A systematic map of demographic data from elephant populations across Africa: implications for poaching and population analyses

    Hauenstein, S., Jassoy, N., Mupepele, A-C., Carroll, T., Kshatriya, M., Beale, C. M. & Dormann, C. F., 19 Apr 2022, (E-pub ahead of print)

    Letter in Mammal Review

  11. In silico Docking Analysis for Blocking JUNO‐IZUMO1 Interaction Identifies Two Small Molecules that Block in vitro Fertilization

    Stepanenko, N., Wolk, O., Bianchi, E., Wright, G. J., Schachter-Safrai, N., Makedonski, K., Ouro, A., Ben-Meir, A., Buganim, Y. & Goldblum, A., 5 Apr 2022, (E-pub ahead of print)

    Article in Frontiers in cell and developmental biology

  12. CRISPR/Cas9-based precision tagging of essential genes in bloodstream form African trypanosomes

    Kovářová, J., Novotná, M., Faria, J., Rico, E., Wallace, C., Zoltner, M., Field, M. C. & Horn, D., 1 Apr 2022, (E-pub ahead of print)

    Article in MOLECULAR AND BIOCHEMICAL PARASITOLOGY

  13. Meta-analysis of diazotrophic signatures across terrestrial ecosystems at the continental scale

    Zhu, C., Friman, V-P., Li, L., Xu, Q., Guo, J., Guo, S., Shen, Q. & Ling, N., 1 Apr 2022, (E-pub ahead of print)

    Article in Environmental Microbiology

  14. Dysregulation of Hepatitis B Virus Nucleocapsid Assembly in vitro by RNA-binding Small Ligands

    Patel, N., Abulwerdi, F., Fatehi Chenar, F., Manfield, I., Le Grice, S., Schneekloth, Jr., J. S., Twarock, R. & Stockley, P. G., 24 Mar 2022, (E-pub ahead of print)

    Article in Journal of Molecular Biology

  15. Prion-like domains drive CIZ1 assembly formation at the inactive X chromosome

    Sofi, S., Williamson, L., Turvey, G., Scoynes, C., Hurst, C., Godwin, J., Brockdorff, N., Ainscough, J. & Coverley, D. A., 15 Mar 2022, (E-pub ahead of print)

    Article in Journal of Cell Biology

  16. No evidence for trade-offs between bird diversity, yield and water table depth on oil palm smallholdings: implications for tropical peatland landscape restoration

    Warren-Thomas, E. M., Agus, F., Akbar, P. G., Crowson, M., Hamer, K. C., Hariyadi, B., Hodgson, J. A., Kartika, W. D., Lopes, M., Lucey, J. M., Mustaqim, D., Pettorelli, N., Saad, A., Sari, W., Sukma, G., Stringer, L., Ward, C. & Hill, J. K., 14 Mar 2022, (E-pub ahead of print)

    Article in Journal of Applied Ecology

  17. Multi-omic based production strain improvement (MOBpsi) for bio-manufacturing of toxic chemicals

    Webb, J. P., Paiva, A. C., Rossoni, L., Alstrom-Moore, A., Springthorpe, V., Vaud, S., Yeh, V., Minde, D-P., Langer, S., Walker, H., Hounslow, A., Nielsen, D. R., Larson, T., Lilley, K., Stephens, G., Thomas, G. H., Bonev, B. B., Kelly, D. J., Conradie, A. & Green, J., 11 Mar 2022, (E-pub ahead of print)

    Article in Metabolic engineering

  18. Induction of APOBEC3-mediated genomic damage in urothelium implicates BK polyomavirus (BKPyV) as a hit-and-run driver for bladder cancer

    Baker, S. C., Mason, A. S., Slip, R., Skinner, K., Macdonald, A., Masood, O., Harris, R. S., Fenton, T. R., Periyasamy, M., Ali, S. & Southgate, J., 22 Feb 2022, (E-pub ahead of print)

    Article in Oncogene

  19. Inflammatory Caspases: Toward a Unified Model for Caspase Activation by Inflammasomes

    Ross, C., Chan, A. H., von Pein, J. B., Maddugoda, M. P., Boucher, D. & Schroder, K., 26 Jan 2022, (E-pub ahead of print)

    Review article in Annual review of immunology

  20. The effect of age, sex, and resource abundance on patterns of rake markings in resident killer whales (Orcinus orca)

    Grimes, C., Brent, L. JN., Weiss, M. N., Franks, D. W., Balcomb, K. C., Ellifrit, D. K., Ellis, S. & Croft, D. P., 24 Jan 2022, (E-pub ahead of print)

    Article in Marine Mammal Science

  21. Organochlorine contamination enriches virus-encoded metabolism and pesticide degradation associated auxiliary genes in soil microbiomes

    Zheng, X., Jahn, M. T., Sun, M., Friman, V-P., Balcazar, J. L., Wang, J., Shi, Y., Gong, X., Hu, F. & Zhu, Y-G., 17 Jan 2022, (E-pub ahead of print)

    Article in The ISME Journal

  22. Innovative vaccine approaches—a Keystone Symposia report

    Cable, J., Rappuoli, R., Klemm, E. J., Kang, G., Mutreja, A., Wright, G. J., Pizza, M., Castro, S. A., Hoffmann, J. P., Alter, G., Carfi, A., Pollard, A. J., Krammer, F. K., Gupta, R. K., Wagner, C. E., Machado, V., Modjarrad, K., Corey, L., Gilbert, P. B., Dougan, G. & 14 others, Lurie, N., Bjorkman, P. J., Chiu, C., Nemes, E., Gordon, S. B., Steer, A. C., Rudel, T., Blish, C. A., Sandberg, J. T., Brennan, K., Klugman, K. P., Stuart, L. M., Madhi, S. A. & Karp, C. L., 14 Jan 2022, (E-pub ahead of print)

    Article in Annals of the New York Academy of Sciences

  23. Surface Shave: Revealing the Apical-Restricted Uroglycome

    Wang, C. Y., Bergström, E., Southgate, J. & Thomas-Oates, J., 5 Jan 2022, (E-pub ahead of print)

    Article in Journal of Proteome Research

  24. 2021
  25. Transformations to Regenerative Food Systems- An outline of the FixOurFood project

    Doherty, B., Bryant, M., Denby, K., Fazey, I. R. A., Bridle, S., Hawkes, C., Cain, M., Banwart, S., Collins, L., Pickett, K., Allen, M., Ball, P. D., Gardner, G. E., Carmen, E., Sinclair, M., Kluczkovski, A., Ehgartner, U., Morris, B., James, A., Yap, C. & 2 others, Om, S. & Connolly, A., 12 Dec 2021, (E-pub ahead of print)

    Article in Nutrition Bulletin

  26. Anthropogenic pressures coincide with Neotropical biodiversity hotspots in a flagship butterfly group

    Doré, M., Willmott, K., Leroy, B., Chazot, N., Mallet, J., Freitas, A. V. L., Hall, J. P. W., Lamas, G., Dasmahapatra, K. K., Fontaine, C. & Elias, M., 9 Dec 2021, (E-pub ahead of print)

    Article in Diversity and Distributions

  27. The Rpd3-complex regulates expression of multiple cell surface recycling factors in yeast

    Amoiradaki, K., Bunting, K. R., Paine, K., Ayre, J., Hogg, K., Laidlaw, K. M. E. & MacDonald, C., 19 Nov 2021, (E-pub ahead of print)

    Article in International Journal of Molecular Sciences

  28. Glial Nrf2 signaling mediates the neuroprotection exerted by Gastrodia elata Blume in Lrrk2-G2019S Parkinson's disease

    Lin, Y-E., Lin, C-H., Ho, E-P., Ke, Y-C., Petridi, S., Elliott, C., Sheen, L-Y. & Chien, C-T., 15 Nov 2021, (E-pub ahead of print)

    Article in eLife

  29. Complex basis of hybrid female sterility and Haldane's rule in Heliconius butterflies: Z-linkage and epistasis

    Rosser, N. S., Edelman, N., Queste, L., Nelson, M., Seixas, F., Dasmahapatra, K. K. & Mallet, J., 14 Nov 2021, (E-pub ahead of print)

    Article in Molecular Ecology

  30. Accuracy and Power Analysis of Social Networks Built From Count Data

    Hart, J. D. A., Franks, D. W., Brent, L. J. N. & Weiss, M. N., 16 Oct 2021, (E-pub ahead of print)

    Article in Methods in ecology and evolution

  31. Early reduction in PD-L1 expression predicts faster treatment response in human cutaneous leishmaniasis

    Dey, N. S., Senaratne, S., Somaratne, V., Madarasinghe, N. P., Seneviratne, B., Forrester, S., Montes de Oca, M., Reis, L. C., Moulik, S., Walrad, P. B., Chatterjee, M., Goto, H., Wickremasinghe, R., Lagos, D., Kaye, P. M. & Ranasinghe, S., 5 Oct 2021, (E-pub ahead of print)

    Article in Journal of Clinical Investigation

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