Search research publications and outputs

  1. 2021
  2. The Rpd3-complex regulates expression of multiple cell surface recycling factors in yeast

    Amoiradaki, K., Bunting, K. R., Paine, K., Ayre, J., Hogg, K., Laidlaw, K. M. E. & MacDonald, C., 19 Nov 2021, (E-pub ahead of print)

    Article in International Journal of Molecular Sciences

  3. Glial Nrf2 signaling mediates the neuroprotection exerted by Gastrodia elata Blume in Lrrk2-G2019S Parkinson's disease

    Lin, Y-E., Lin, C-H., Ho, E-P., Ke, Y-C., Petridi, S., Elliott, C., Sheen, L-Y. & Chien, C-T., 15 Nov 2021, (E-pub ahead of print)

    Article in eLife

  4. Accuracy and Power Analysis of Social Networks Built From Count Data

    Hart, J. D. A., Franks, D. W., Brent, L. J. N. & Weiss, M. N., 16 Oct 2021, (E-pub ahead of print)

    Article in Methods in ecology and evolution

  5. Early reduction in PD-L1 expression predicts faster treatment response in human cutaneous leishmaniasis

    Dey, N. S., Senaratne, S., Somaratne, V., Madarasinghe, N. P., Seneviratne, B., Forrester, S., Montes de Oca, M., Reis, L. C., Moulik, S., Walrad, P. B., Chatterjee, M., Goto, H., Wickremasinghe, R., Lagos, D., Kaye, P. M. & Ranasinghe, S., 5 Oct 2021, (E-pub ahead of print)

    Article in Journal of Clinical Investigation

  6. Bone Marrow Remodelling Supports Hematopoiesis in Response to Immune Thrombocytopenia Progression

    Herd, O., Rani, G. F., Hewitson, J. P., Hogg, K., Stone, A., Cooper, N., Kent, D. G., Genever, P. & Hitchcock, I. S., 24 Aug 2021, (E-pub ahead of print)

    Article in Blood Advances

  7. Secreted pectin monooxygenases drive plant infection by pathogenic oomycetes

    Sabbadin, F., Urresti, S., Henrissat, B., Avrova, A. O., Welsh, L. R. J., Lindley, P., Csukai, M., Squires, J. N., Walton, P. H., Davies, G. J., Bruce, N. C., Whisson, S. C. & McQueen Mason, S. J., 13 Aug 2021, (E-pub ahead of print)

    Article in Science

  8. Time series transcriptomics reveals a BBX32-directed control of acclimation to high light in mature Arabidopsis leaves

    Alvarez-Fernandez, R., Penfold, C. A., Galvez-Valdivieso, G., Exposito-Rodriguez, M., Stallard, E. J., Bowden, L., Moore, J. D., Mead, A., Davey, P. A., Matthews, J. S. A., Beynon, J., Buchanan-Wollaston, V., Wild, D. L., Lawson, T., Bechtold, U., Denby, K. & Mullineaux, P. M., 6 Aug 2021, (E-pub ahead of print)

    Article in The Plant journal

  9. Elucidating the Role of Topological Constraint on the Structure of Overstretched DNA using Fluorescence Polarization Microscopy

    Backer, A. S., King, G. A., Biebricher, A. S., Shepherd, J., Noy, A., Leake, M. C., Heller, I., Wuite, G. J. L. & Peterman, E. J. G., 26 Jul 2021, (E-pub ahead of print)

    Article in The Journal of Physical Chemistry

  10. Modelling of gene loss propensity in the pangenomes of three Brassica species suggests different mechanisms between polyploids and diploids

    Bayer, P. E., Scheben, A., Golicz, A. A., Yuan, Y., Faure, S., Lee, H., Chawla, H. S., Anderson, R., Bancroft, I., Raman, H., Lim, Y. P., Robbens, S., Jiang, L., Liu, S., Barker, M. S., Schranz, M. E., Wang, X., King, G. J., Pires, J. C., Chalhoub, B. & 3 others, Snowdon, R. J., Batley, J. & Edwards, D., 26 Jul 2021, (E-pub ahead of print)

    Article in Plant biology

  11. Proximity to forest mediates trade-offs between yields and biodiversity of birds in oil palm smallholdings

    Hamer, K. C., Sasu, M. A., Ofosuhene, L., Asare, R., Ossom, B., Parr, C. L., Scriven, S. A-L., Asante, W., Addico, R. & Hill, J. K., 18 Jul 2021, (E-pub ahead of print)

    Article in Biotropica

  12. Airborne and indigenous microbiomes co-drive the rebound of antibiotic resistome during compost storage

    Liao, H., Bai, Y., Liu, C., Wen, C., Yang, Q., Chen, Z., Banerjee, S., Zhou, S. & Friman, V-P., 14 Jul 2021, (E-pub ahead of print)

    Article in Environmental Microbiology

  13. Rapid compensatory evolution can rescue low fitness symbioses following partner-switching

    Sørensen, M. E. S., Wood, A. J., Cameron, D. D. & Brockhurst, M., 12 Jul 2021, (E-pub ahead of print)

    Article in Current Biology

  14. An alkynylpyrimidine-based covalent inhibitor that targets a unique cysteine in NF-κB-inducing kinase (NIK)

    Al-Khawaldeh, I., Alyassiri, M., Aldred, G., Basmadjian, C., Bordoni, C., Harnor, S. J., Heptinstall, A. B., Hobson, S., Jennings, C., Khalifa, S., Lebraud, H., Martin, M. P., Miller, D. C., Shrives, H., De Souza, J., Stewart, H., Temple, M. J., Thomas, H., Totobenazara, J., Tucker, J. A. & 12 others, Tudhope, S., Wang, L-Z., Bronowska, A., Cano, C., Endicott, J. A., Golding, B., Hardcastle, I. R., Hickson, I., Wedge, S., Willmore, E., Noble, M. E. M. & Waring, M. J., 2 Jul 2021, (E-pub ahead of print)

    Article in JOURNAL OF MEDICINAL CHEMISTRY

  15. A long postreproductive life span is a shared trait among genetically distinct killer whale populations

    Nielsen, M., Ellis, S., Towers, J., Doniol-Valcroze, T., Franks, D. W., Cant, M., Weiss, M., Johnstone, R. A., Balcomb, K. C., Ellifrit, D. K. & Croft, D., 16 Jun 2021, (E-pub ahead of print)

    Article in Ecology and Evolution

  16. Validation of IMS-MS as a screening tool to identify type II kinase inhibitors of FGFR1 kinase

    Beeston, H., Klein, T., Norman, R., Tucker, J. A., Anderson, M., Ashcroft, A. E. & Holdgate, G., 26 May 2021, (E-pub ahead of print)

    Article in Rapid Communications in Mass Spectrometry

  17. 17-AAG-induced activation of the autophagic pathway in Leishmania is associated with parasite death

    Petersen, A. L. D. O. A., Cull, B., Simões Dias, B. R., Palma, L. C., da Silva Luz, Y., de Menezes, J. P. B., Mottram, J. C. & Veras, P. S. T., 19 May 2021, (E-pub ahead of print)

    Article in Microorganisms

  18. A chromosome-level Amaranthus cruentus genome assembly highlights gene family evolution and biosynthetic gene clusters that may underpin the nutritional value of this traditional crop

    Ma, X., Vaistij, F. E., Li, Y., Jansen van Rensburg, W. S., Harvey, S. E., Bairu, M. W., Venter, S. L., Mavengahama, S., Ning, Z., Graham, I. A., Van Deynze, A., Van de Peer, Y. & Denby, K., 7 May 2021, (E-pub ahead of print)

    Article in The Plant journal

  19. Field trial demonstrating phytoremediation of the military explosive RDX using XplAB-expressing switchgrass in-the-field

    Cary, T. J., Rylott, L., Zhang, L., Routsong, R., Palazzo, A. J., Strand, S. E. & Bruce, N. C., 3 May 2021, (E-pub ahead of print)

    Article in Nature Biotechnology

  20. Nest choice in arboreal ants is an emergent consequence of network creation under spatial constraints

    Chang, J., Powell, S., Robinson, E. J. H. & Donaldson-Matasci, M. C., 24 Apr 2021, (E-pub ahead of print)

    Article in Swarm Intelligence

  21. The relative importance of soil moisture in predicting bacterial wilt disease occurrence

    Jiang, G., Ningqi, W., Yaoyu, Z., Wang, Z., Zhang, Y., Yu, J., Zhang, Y., Wei, Z., Xu, Y-C., Geisen, S., Friman, V-P. & Shen, Q., 15 Apr 2021, (E-pub ahead of print)

    Article in Soil Ecology Letters

  22. Zinc-dependent multimerization of mutant calreticulin is required for MPL binding and MPN pathogenesis

    Rivera, J. F., Baral, A. J., Nadat, F., Boyd, G., Smyth, R., Patel, H., Burman, E. L., Alameer, G., Boxall, S. A., Jackson, B. R., Baxter, J., Laslo, P., Green, A. R., Kent, D. G., Mullally, A. & Chen, E., 5 Apr 2021, (E-pub ahead of print)

    Article in Blood Advances

  23. Presynaptic accumulation of α-synuclein causes synaptopathy and progressive neurodegeneration in Drosophila

    Bridi, J. C., Bereczki, E., Smith, S. K., Pocas, G. M., Kottler, B., Domingos, P. M., Elliott, C., Aarsland, D. & Hirth, F., 22 Mar 2021, (E-pub ahead of print)

    Article in Brain Communications

  24. Substrate anchoring and flexibility reduction in CYP153AM.aq leads to highly improved activity towards octanoic acid

    Grogan, G. J., Rowlinson, B., Sharma, M., Zukic, E., Hauer, B., Rapp, L., Marques, S. & Damborsky, J., 24 Feb 2021, (E-pub ahead of print)

    Article in ACS Catalysis

  25. Herbicide selection promotes antibiotic resistance in soil microbiomes

    Liao, H., Li, X., Yang, Q., Bai, Y., Cui, P., Wen, C., Liu, C., Chen, Z., Tang, J., Che, J., Yu, Z., Geisen, S., Zhou, S., Friman, V-P. & Zhu, Y-G., 16 Feb 2021, (E-pub ahead of print)

    Article in Molecular Biology and Evolution

  26. Single-molecule FRET dynamics of molecular motors in an ABEL Trap

    Dienerowitz, M., Howard, J. A. L., Quinn, S., Dienerowitz, F. & Leake, M. C., 9 Feb 2021, (E-pub ahead of print)

    Article in Methods

  27. A recombineering pipeline to clone large and complex genes in Chlamydomonas

    Emrich-Mills, T. Z., Yates, G., Barrett, J., Girr, P., Grouneva, I., Lau, C. S., Walker, C. E., Kwok, T. K., Davey, J. W., Johnson, M. P. & Mackinder, L., 2 Feb 2021, (E-pub ahead of print)

    Article in The Plant Cell

  28. Autophagy inhibition rescues structural and functional defects caused by the loss of mitochondrial chaperone Hsc70-5 in Drosophila

    Zhu, J., Hannan, S. B., Dräger, N. M., Vereshchagina, N., Krahl, A-C., Fu, Y., Elliott, C., Han, Z., Jahn, T. R. & Rasse, T. M., 25 Jan 2021, (E-pub ahead of print)

    Article in Autophagy

  29. The preservation of ancient DNA in archaeological fish bone

    Ferrari, G., Cuevas, A., Gondek-Wyrozemska, A. T., Ballantyne, R., Kersten, O., Pálsdóttir, A. H., van der Jagt, I., Hufthammer, A. K., Ystgaard, I., Wickler, S., Bigelow, G. F., Harland, J., Nicholson, R., Orton, D., Clavel, B., Boessenkool, S., Barrett, J. H. & Star, B., 9 Jan 2021, (E-pub ahead of print)

    Article in Journal of archaeological science

  30. 2020
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