Search research publications and outputs

  1. Article › Research › Not peer-reviewed
  2. Article › Research › Peer-reviewed
  3. A CLK1-KKT2 signaling pathway regulating kinetochore assembly in Trypanosoma brucei.

    Saldivia, M., Wollman, A. J. M., Carnielli, J. B. T., Jones, N. G., Leake, M. C., Bower-Lepts, C., Rao, S. P. S. & Mottram, J. C., 7 May 2021, (Accepted/In press)

    Article in MBio

  4. A curated list of genes that affect the plant ionome

    Whitt, L., Ricachenevsky, F. K., Ziegler, G., Clemens, S., Walker, E., Maathuis, F., Kear, P. & Baxter, I., 28 Aug 2020, (Accepted/In press)

    Article in Plant Direct

  5. A novel protein from Ectocarpus sp. improves salinity and high temperature stress tolerance in Arabidopsis thaliana

    Rathor, P., Borza, T., Stone, S., Tonon, T., Yurgel, S., Potin, P. & Prithiviraj, B., 13 Feb 2021, (Accepted/In press)

    Article in International Journal of Molecular Sciences

  6. Agri-environment conservation set-asides have co-benefits for connectivity

    Threadgill, K., McClean, C. J., Hodgson, J. A., Jones, N. & Hill, J. K., 28 May 2020, (Accepted/In press)

    Article in Ecography

  7. Allele-aware chromosome-level genome assembly of Artemisia annua reveals the correlation between ADS expansion and artemisinin yield

    Liao, B., Shen, X., Xiang, L., Guo, S., Chen, S., Meng, Y., Liang, Y., Ding, D., Bai, J., Zhang, D., Czechowski, T., Li, Y., Yao, H., Ma, T., Howard, C., Sun, C., Liu, H., Liu, J., Pei, J., Gao, J. & 10 others, Wang, J., Qiu, X., Huang, Z., Li, H., Yuan, L., Wei, J., Graham, I. A., Xu, J., Zhang, B. & Chen, S., 27 May 2022, (Accepted/In press)

    Article in Molecular plant

  8. Bio-removal of Yttrium (III), Cerium (III), Europium (III) and Terbium (III) from single and quaternary aqueous solutions using the extremophile Galdieria sulphuraria (Galdieriaceae, Rhodophyta)

    Iovinella, M., Lombardo, F., Ciniglia, C., Palmieri, M., Di Cicco, M. R., Trifuogg, M., Race, M., Manfredi, C., Lubritto, C., Fabbricino, M., De Stefano, M. & Davis, S. J., 20 May 2022, (Accepted/In press)

    Article in Plants

  9. Biogeochemical processes in the active layer and permafrost of a high Arctic fjord valley

    Jones, E. L., Hodson, A. J., Thornton, S. F., Redeker, K. R., Rogers, J., Wynn, P. M., Dixon, T., Bottrell, S. H. & O'Neill, H. B., 21 Jul 2020, (Accepted/In press)

    Article in Frontiers in Earth Science

  10. CD317-Positive Immune Stromal Cells in Human "Mesenchymal Stem Cell" Populations

    Kay, A. G., Fox, J. M., Hewitson, J. P., Stone, A., Robertson, S., James, S., Wang, X., Kapasa, E., Yang, X. & Genever, P., 4 May 2022, (Accepted/In press)

    Article in Frontiers in immunology

  11. Candidates for Balancing Selection in Leishmania donovani Complex Parasites

    Grace, C. A., Forrester, S. J., Costa Silva, V., Carvalho, K. S. S., Kilford, H., Chew, Y. P., James, S., Costa, D. L., Mottram, J. C., Costa, C. H. N. & Jeffares, D., 22 Nov 2021, (Accepted/In press)

    Article in Molecular Biology and Evolution

  12. Characterization of redox sensitive algal mannitol-1-phosphatases of the haloacid dehalogenase superfamily of proteins

    Le Strat, Y., Tonon, T., Le Blanc, C. & Groisillier, A., 1 Jul 2020, (Accepted/In press)

    Article in bioRxiv

  13. Control of oviductal fluid flow by the G-protein coupled receptor Adgrd1 is essential for murine embryo transit

    Bianchi, E., Sun, Y., Almansa-Ordonez, A., Woods, M., Goulding, D., Martinez-Martin, N. & Wright, G. J., 29 Jan 2021, (Accepted/In press)

    Article in Nature Communications

  14. Cyanidiophyceae (Rhodophyta) tolerance to precious metals: metabolic response to Cl4K2Pd and AuCl4K

    Sirakov, M., Palmieri, M. P., Iovinella, M., Davis, S. J., Petriccione, M., Di Cicco, M. R., De Stefano, M. & Ciniglia, C., 29 Oct 2021, (Accepted/In press)

    Article in Plants

  15. Demographic Reconstruction of Antarctic Fur Seals Supports the Krill Surplus Hypothesis

    Hoffman, J. I., Chen, R. S., Vendrami, D. L. J., Paijmans, A. J., Dasmahapatra, K. K. & Forcada, J., 10 Mar 2022, (Accepted/In press)

    Article in Genes

  16. Dimerization drives proper folding of human alanine: glyoxylate aminotransferase but is dispensable for peroxisomal targeting

    Dindo, M., Ambrosini, G., Oppici, E., Pey, A. L., O'Toole, P. J., Marrison, J., Morrison, I. E. G., Butturini, E., Grottelli, S., Costantini, C. & Cellini, B., 2 Apr 2021, (Accepted/In press)

    Article in Journal of Personalized Medicine

  17. Divergent cytochrome c maturation system in kinetoplastid protists

    Belbelazi, A., Neish, R., Carr, M., Mottram, J. C. & Ginger, M. L., 30 Mar 2021, (Accepted/In press)

    Article in MBio

  18. ETS transcription factor ELF3 (ESE-1) is a cell cycle regulator in benign and malignant prostate

    Archer, L. K., Frame, F. M., Walker, H. F., Droop, A. P., McDonald, G. L. K., Kucko, S., Berney, D. M., Mann, V. M., Simms, M. S. & Maitland, N. J., 3 Apr 2022, (Accepted/In press)

    Article in FEBS open bio

  19. Emerging illegal wildlife trade issues: a global horizon scan

    Esmail, N., Wintle, B. C., 't Sas-Rolfes, M., Athanas, A., Beale, C. M., Bending, Z., Dai, R., Fabinyi, M., Gluszek, S., Haenlein, C., Harrington, L. A., Hinsley, A., Karivki, K., Lam, J., Markus, M., Paudel, K., Shukhova, S., Sutherland, W. J., Verissimo, D., Wang, Y. & 5 others, Waugh, J., Wetton, J. H., Workman, C., Wright, J. & Milner-Gulland, E., 29 Feb 2020, (Accepted/In press)

    Article in Conservation Letters

  20. Essential roles for deubiquitination in Leishmania life cycle progression

    Damianou, A., Burge, R., Catta-Preta, C. M. C., Geoghegan, V. L., Nievas, R., Newling, K., Brown, E., Burchmore, R. J., Rodenko, B. & Mottram, J. C., 9 Jun 2020, (Accepted/In press)

    Article in PLOS PATHOGENS

  21. Evidence of deterrence from patrol data: trialling application of a differenced-CPUE metric

    Dancer, A., Keane, A., Beale, C. M., Dobson, A., Amin, R., Freeman, R., Imong, I., Jones, K., Linkie, M., Long, B., Okeke, F. O., Plumptre, A. J., Rowcliffe, J. M., Stokes, E. J., van der Westhuizen, E. & Collen, B., 16 May 2022, (Accepted/In press)

    Article in Conservation Science and Practice

  22. Exploiting breakdown in nonhost effector-target interactions to boost host disease resistance

    McLellan, H., Harvey, S. E., Steinbrenner, J., Armstrong, M. R., He, Q., Clewes, R., Pritchard, L., Wang, W., Wang, S., Nussbaumer, T., Dohai, B., Luo, Q., Kumari, P., Duan, H., Roberts, A., Boevink, P. C., Neumann, C., Champouret, N., Hein, I., Falter-Braun, P. & 3 others, Beynon, J., Denby, K. & Birch, P. RJ., 25 Jul 2022, (Accepted/In press)

    Article in Proceedings of the National Academy of Sciences of the United States of America

  23. Exploring the potential for ‘Gene Conservation Units’ to conserve genetic diversity in wild populations

    Minter, M., O'Brien, D., Cottrell, J., Ennos, R., Hill, J. K. & Hall, J., 7 Mar 2021, (Accepted/In press)

    Article in Ecological Solutions and Evidence

  24. Identification and characterization of in vitro expanded hematopoietic stem cells

    Che, J., Bode, D., Kucinski, I., Cull, A. H., Bain, F., Becker, H. J., Jassinskaja, M., Barile, M., Boyd, G., Belmonte, M., Zeng, A. G. X., Igarashi, K. J., Rubio-Lara, J., Shepherd, M. S., Clay, A., Dick, J. E., Wilkinson, A. C., Nakauchi, H., Yamazaki, S., Göttgens, B. & 1 others, Kent, D. G., 27 Jul 2022, (Accepted/In press)

    Article in EMBO Reports

  25. Identification of mesenchymal stromal cell survival responses to antimicrobial silver ion concentrations released from orthopaedic implants

    Souter, P., Vaughan, J., Butcher, K., Dowle, A., Cunningham, J. C., Dodd, J., Hall, M., Wilson, D., Horner, A. & Genever, P., 27 Aug 2020, (Accepted/In press)

    Article in Scientific Reports

  26. Impact on Arabidopsis growth and stress resistance of depleting the Maf1 repressor of RNA polymerase III

    Blayney, J., Geary, J., Chrisp, R., Violet, J., Barratt, L., Tavukcu, L., Paine, K., Graham, I. A., Denby, K., White, B. & Vaistij, F. E., 15 Dec 2021, (Accepted/In press)

    Article in Gene

  27. Importance of Angomonas deanei KAP4 for kDNA arrangement, cell division and maintenance of the host-bacterium relationship

    Gonçalves, C. S., Catta-Preta, C. M. C., Repolês, B., Mottram, J. C., de Souza, W., Machado, C. R. & Motta, M. C. M., 13 Apr 2021, (Accepted/In press)

    Article in Scientific Reports

  28. Longitudinal cytokine profiling identifies GRO-α and EGF as potential biomarkers of disease progression in Essential Thrombocythemia

    Øbro, N. F., Grinfeld, J., Belmonte, M., Irvine, M., Shepherd, M. S., Rao, T. N., Karow, A., Riedel, L. M., Harris, O. B., Baxter, E. J., Nangalia, J., Godfrey, A., Harrison, C. N., Li, J., Skoda, R. C., Campbell, P. J., Green, A. R. & Kent, D. G., 3 Mar 2020, (Accepted/In press)

    Article in HemaSphere

  29. Macrophage migration inhibitory factor (MIF) is essential for Type 2 effector cell immunity to an intestinal helminth parasite

    Filbey, K. J., Varyani, F., Harcus, Y., Hewitson, J. P., Smyth, D. J., McSorley, H. J., Ivens, A., Nylén, S., Rottenberg, M., Loser, S. & Maizels, R. M., 23 Sep 2019, (Accepted/In press)

    Article in Frontiers in immunology

  30. Mining the biomass deconstructing capabilities of rice yellow stem borer symbionts

    Singh, R., Bennett, J. P., Gupta, M., Sharma, M., Eqbal, D., Alessi, A., Dowle, A., McQueen Mason, S. J., Bruce, N. C. & Yazdani, S. S., 24 Oct 2019, (Accepted/In press)

    Article in Biotechnology for biofuels

  31. Non-destructive chemical sensing within bulk soil using 1000 biosensors per gram of matrix

    Fulk, E. M., Gao, X., Chieh Lu, L., Redeker, K. R., Masiello, C. A. & Silberg, J. J., 6 Jun 2022, (Accepted/In press)

    Article in ACS Synthetic Biology

  32. Open system pingos as hotspots for sub-permafrost methane emission in Svalbard

    Hodson, A., Nowak, A., Hornum, M. T., Senger, K., Redeker, K. R., Christiansen, H. H., Jessen, S., Betlem, P., Thornton, S. F., Turchyn, A. V., Olaussen, S. & Marca, A., 24 Sep 2020, (Accepted/In press)

    Article in Cryosphere

  33. Parallel evolution of Pseudomonas aeruginosa phage resistance and virulence loss in response to phage treatment in vivo and in vitro

    Castledine, M., Padfield, D., Sierocinski, P., Pascual, J. S., Hughes, A., Makinen, L., Friman, V-P., Pirnay, J-P., Merabishvili, M., De Vos, D. & Buckling, A., 21 Feb 2022, (Accepted/In press)

    Article in eLife

  34. Past, current and potential future distributions of unique genetic diversity in a cold‐adapted mountain butterfly

    Minter, M., Dasmahapatra, K. K., Thomas, C. D., Morecroft, M. D., Tonhasca, A., Schmitt, T., Siozios, S. & Hill, J. K., 29 Jul 2020, (Accepted/In press)

    Article in Ecology and Evolution

  35. Patterns and consequences of age-linked change in local relatedness in animal societies

    Ellis, S., Johnstone, R. A., Cant, M. A., Franks, D. W., Weiss, M. N., Alberts, S. C., Balcomb, K. C., Benton, C. H., Brent, L. J. N., Crockford, C., Davidian, E., Delahay, R. J., Ellifrit, D. K., Honer, O., Meniri, M., McDonald, R. A., Nichols, H. J., Thompson, F. J., Vigilant, L., Wittig, R. M. & 1 others, Croft, D. P., 1 Aug 2022, (Accepted/In press)

    Article in Nature Ecology and Evolution

  36. Pharmacological and nutritional targeting of voltage-gated sodium channels in the treatment of cancers

    Lopez-Charcas, O., Pukkanasut, P., Velu, S. E., Brackenbury, W., Hales, T. G., Besson, P., Gomora, J. C. & Roger, S., 1 Mar 2021, (Accepted/In press)

    Article in iScience

  37. Rapid evolution of bacterial mutualism in the plant rhizosphere

    Li, E., de Jonge, R., Liu, C., Jiang, H., Friman, V-P., Pieterse, C. M. J., Bakker, P. A. H. M. & Jousset, A., 24 May 2021, (Accepted/In press)

    Article in Nature Communications

  38. Reliable, scalable functional genetics in bloodstream-form Trypanosoma congolense in vitro and in vivo

    Awuah-Mensah, G., McDonald, J., Steketee, P. C., Autheman, D., Whipple, S., D'Archivio, S., Brandt, C., Clare, S., Harcourt, K., Wright, G. J., Morrison, L. J., Gadelha, C. & Wickstead, B., 7 Dec 2020, (Accepted/In press)

    Article in PLOS PATHOGENS

  39. Resting and feeding preferences of Anopheles stephensi in an urban setting, perennial for malaria

    Thomas, S., Ravishankaran, S., Justin, N. A. J. A., Asokan, A., Mathai, M. T., Valecha, N., Montgomery, J., Thomas, M. B. & Eapen, A., 28 Feb 2017, (Accepted/In press)

    Article in MALARIA JOURNAL

  40. Systematic identification of P. falciparum sporozoite membrane protein interactions reveals an essential role for the p24 complex in host infection

    Knöcke, J., Dundas, K., Yang, A. S. P., Galaway, F., Metcalf, T., van Gemert, G-J., Sauerwein, R. W., Rayner, J. C., Billker, O. & Wright, G. J., 22 Dec 2020, (Accepted/In press)

    Article in Molecular and Cellular Proteomics

  41. Systematic identification of genes encoding cell surface and secreted proteins that are essential for in vitro growth and infection in Leishmania donovani

    Roberts, A., Ong, H., Clare, S., Brandt, C., Harcourt, K., Franssen, S., Cotton, J., Muller-Sienerth, N. & Wright, G. J., 21 Feb 2022, (Accepted/In press)

    Article in PLOS PATHOGENS

  42. TFIIIC-based chromatin insulators through eukaryotic evolution

    Sizer, R. E., Chahid, N., Butterfield, S. P., Donze, D., Bryant, N. J. & White, R. J., 15 Aug 2022

    Article in Gene

  43. TIME FOR COFFEE regulates phytochrome A-mediated hypocotyl growth through dawn-phased signaling

    Wang, Y., Su, C., Yu, Y., He, Y., Wei, H., Li, N., Li, H., Duan, J., Li, B., Li, J., Davis, S. J. & Wang, L., 6 May 2022, (Accepted/In press)

    Article in The Plant Cell

  44. TLR2, TLR4 and Protein kinase R (PKR) induced Type I Interferon sustains infection of Leishmania donovani in macrophages

    Torres Dias, B., Goundry, A., Vivarini, A. C., Costa, T. F. R., Mottram, J. C., Gazos Lopes, U. & Lima, A. P. C. A., 6 Jan 2022, (Accepted/In press)

    Article in Frontiers in immunology

  45. Testing the effectiveness of the Forest Integrity Assessment: a field-based tool for estimating the condition of tropical forest

    Suggitt, A., Yeong, K. L., Lindhe, A., Agama, A., Hamer, K. C., Reynolds, G., Hill, J. K. & Lucy, J., 25 Mar 2021, (Accepted/In press)

    Article in Ecological Solutions and Evidence

  46. The Leishmania donovani Ortholog of the Glycosylphosphatidylinositol Anchor Biosynthesis Cofactor PBN1 Is Essential for Host Infection

    Roberts, A., Nagar, R., Brandt, C., Harcourt, K., Clare, S., Ferguson, M. A. J. & Wright, G. J., 14 Apr 2022, (Accepted/In press)

    Article in MBio

  47. The effect of lithium on the budding yeast Saccharomyces cerevisiae upon stress adaptation

    Reith, P., Braam, S., Welkenhuysen, N., Lecinski, S., Shepherd, J., MacDonald, C., Leake, M. C., Hohmann, S., Shashkova, S. & Cvijovic, M., 7 Mar 2022, (Accepted/In press)

    Article in Microorganisms

  48. The impact of Endogenous Avian Leukosis Viruses (ALVE) on production traits in elite layer lines

    Fulton, J. E., Mason, A. S., Wolc, A., Arango, J., Settar, P., Lund, A. R. & Burt, D. W., 26 Feb 2021, (Accepted/In press)

    Article in Poultry Science

  49. The impact of intra-specific diversity in the rhizobia-legume symbiosis

    Fields, B., Moffat, E. K., Friman, V-P. & Harrison, E., 23 Mar 2021, (Accepted/In press)

    Article in Microbiology

  50. The molecular basis of thioalcohol production in human body odour

    Rudden, M. M., Herman, R., Rose, M., Bawdon, D., Cox, D. S., Dodson, E., Holden, M. T. G., Wilkinson, A. J., James, A. G. & Thomas, G. H., 26 Jun 2020, (Accepted/In press)

    Article in Scientific Reports

  51. Valorisation of natural resources and the need for economic and sustainability assessment: the case of cocoa pod husk in Indonesia.

    Picchioni, F., Warren, G. P. W., Lambert, S., Balcombe, K., Robinson, J. S., Srinivasan, C., Gomez, L. D., Faas, L., Westwood, N. J., Chatzifragkou, A., Charalampopoulos, D. & Shaw, L. J., 25 Oct 2020, (Accepted/In press)

    Article in Sustainability

  52. Wing morphological responses to latitude and colonisation in a range expanding butterfly

    Taylor-Cox, E. D., MacGregor, C. J., Corthine, A., Hill, J. K., Hodgson, J. & Saccheri, I., 22 Oct 2020, (Accepted/In press)

    Article in Peer J

  53. XBAT31 regulates thermoresponsive hypocotyl growth through mediating degradation of the thermosensor ELF3 in Arabidopsis

    Zhang, L-L., Shao, Y-J., Ding, L., Wang, M-J., Davis, S. J. & Liu, J-X., 1 Mar 2021, (Accepted/In press)

    Article in Science Advances

  54. Literature review › Research › Peer-reviewed
  55. First steps in experimental cancer evolution

    Taylor, T., Johnson, L., Jackson, R., Brockhurst, M. A. & Dash, P., Apr 2013, (Accepted/In press)

    Literature review in Evolutionary applications

  56. Commissioned report › Research
  57. GB Non-native Species Rapid Risk Assessment: Rapid Risk Assessment of: Lasius neglectus (Invasive Garden Ant)

    Buckham-Bonnett, P. & Robinson, E. J. H., 11 Jan 2017, (Accepted/In press) GB Non-native Species Secretariat. 15 p. (GB Non-native Species Rapid Risk Assessments (NRRA))

    Research output: Book/ReportCommissioned report

  58. Paper › Research › Peer-reviewed
  59. Mechanical, chemical, biological: Moving towards closed-loop bio-based recycling in a circular economy of sustainable textiles

    McQueen Mason, S. J., 9 Oct 2021, (Accepted/In press).

    Research output: Contribution to conferencePaperpeer-review

  60. Utilizing the Untapped Potential of Indirect Encoding for Neural Networks with MetaLearning

    Katona, A., Lourenco, N., Machado, P., Franks, D. W. & Walker, J. A., 20 Jan 2021, (Accepted/In press).

    Research output: Contribution to conferencePaperpeer-review

  61. Chapter › Research
  62. Biomethane as an Energy Source

    Robson, J., Alessi, A., Bochiwal, C., O'Malley, C. A. & Chong, J. P. J., 5 Feb 2017, (Accepted/In press) Consequences of Microbial Interactions with Hydrocarbons, Oils, and Lipids: Production of Fuels and Chemicals. Lee, S. Y. (ed.). Springer International Publishing AG, (Handbook of Hydrocarbon and Lipid Microbiology).

    Research output: Chapter in Book/Report/Conference proceedingChapter

  63. Bladder Tissue Regeneration

    Morgante, D. & Southgate, J., 22 Jan 2021, (Accepted/In press) Bladder Tissue Regeneration.

    Research output: Chapter in Book/Report/Conference proceedingChapter

  64. Chromatin dynamics during entry to quiescence and compromised functionality in cancer cells

    Dobbs, G. & Coverley, D. A., 5 Dec 2021, (Accepted/In press) Nuclear Architecture-Springer .

    Research output: Chapter in Book/Report/Conference proceedingChapter

  65. Wood ants and their interaction with other organisms

    Robinson, E. J. H., Stockan, J. & Iason, G. R., 2016, (Accepted/In press) Wood Ant Ecology and Conservation. Stockan, J. & Robinson, E. J. H. (eds.). Cambridge: Cambridge University Press, p. 177-206 8

    Research output: Chapter in Book/Report/Conference proceedingChapter

  66. Conference contribution › Research
  67. Quality Evolvability ES: Evolving Individuals With a Distribution of Well Performing and Diverse Offspring

    Katona, A., Franks, D. W. & Walker, J. A., 26 Apr 2021, (Accepted/In press) ALIFE 2021: Conference on Artificial Life.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution