Search research publications and outputs

  1. Preprint › Research
  2. A Non-Canonical Function of Arabidopsis ERECTA Proteins in Gibberellin Signaling

    Davis, S. J., 3 Dec 2021, 51 p. (bioRxiv).

    Research output: Working paperPreprint

  3. Conference article › Research › Peer-reviewed
  4. Review article › Research › Peer-reviewed
  5. Climate change vulnerability assessment of species

    Foden, W., Young, B., Akçakaya, R., Garcia, R., Hoffman, A., Stein, B., Thomas, C., Wheatley, C. J., Bickford, D., Carr, J., Hole, D., Martin, T., Pacifici, M., Pearce-Higgins, J. W., Platts, P. J., Visconti, P., Watson, J. & Huntley, B., 1 Jan 2019

    Review article in WIREs Climate Change

  6. Longitudinal imaging of the ageing mouse

    Dall'Ara, E., Boudiffa, M., Taylor, C., Schug, D., Fiegle, E., Kennerley, A. J., Damianou, C., Tozer, G. M., Kiessling, F. & Müller, R., Dec 2016

    Review article in Mechanisms of ageing and development

  7. Methodologies for quantitative systems pharmacology (QSP) models: Design and estimation

    Ribba, B., Grimm, H. P., Agoram, B., Davies, M. R., Gadkar, K., Niederer, S., Van Riel, N., Timmis, J. & Van Der Graaf, P. H., 1 Aug 2017

    Review article in CPT Pharmacometrics & Systems Pharmacology

  8. Multiplicity of Mesenchymal Stromal Cells: Finding the Right Route to Therapy

    Wilson, A. J., Hodgson-Garms, M., Frith, J. & Genever, P. G., 16 May 2019

    Review article in Frontiers in immunology

  9. The Role of Vector Trait Variation in Vector-Borne Disease Dynamics

    Cator, L. J., Johnson, L. R., Mordecai, E. A., El Moustaid, F., Smallwood, T. R. C., LaDeau, S. L., Johansson, M. A., Hudson, P. J., Boots, M., Thomas, M. B., Power, A. G. & Pawar, S., 10 Jul 2020

    Review article in Frontiers in Ecology and Evolution

  10. Chapter (peer-reviewed) › Research › Peer-reviewed
  11. New advances in chromosome architecture

    Leake, M. C., 14 Jun 2016, Chromosome Architecture: Methods and Protocols . Leake, M. C. (ed.). Springer, 5 p. (Methods in Molecular Biology; vol. 1431).

    Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)peer-review

  12. Article › Research
  13. Exploring the future land use-biodiversity-climate nexus in East Africa: an application of participatory scenario analysis

    Capitani, C., Norfolk, O., Platts, P. J., Burgess, N., Mukama, K., Malugu, I., Munishi, P. & Marchant, R., 21 Nov 2015, GLP News, 12, p. 10-13 4 p.

    Research output: Contribution to specialist publicationArticle

  14. Discussion paper › Research
  15. Working paper › Research
  16. Conference contribution › Research
  17. Local termination criteria for Stochastic Diffusion Search: a comparison with the behaviour of ant nest-site selection

    Bishop, J. M., Martin, A. O. & Robinson, E. J. H., 20 Sep 2016, Lecture Notes in Artificial Intelligence: Proceedings of the 8th International Conference on Computational Collective Intelligence (ICCCI 2016), Halkidiki, Greece. Nguyen, N-T., Manolopoulos, Y., Iliadis, L. & Trawiński, B. (eds.). Springer-Verlag, Vol. 9875. 13 p. (Lecture Notes in Artificial Intelligence).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  18. Mutational signature modelling in vitro recapitulates bladder cancer initiation

    Baker, S. C., Mason, A. S. & Southgate, J., 1 Dec 2020, Mutational signature modelling in vitro recapitulates bladder cancer initiation. 12 ed. Urologic Oncology Seminars and Original Investigations, Vol. 38. p. 909 1 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  19. Quorum machinery: Effect of the las system in rhl regulation of P. aeruginosa

    Alfiniyah, C., Bees, M. A. & Wood, A. J., 19 Dec 2019, Proceedings of the 8th SEAMS-UGM International Conference on Mathematics and Its Applications 2019: Deepening Mathematical Concepts for Wider Application through Multidisciplinary Research and Industries Collaborations. Utami, H., Kusumo, F. A., Susyanto, N. & Susanti, Y. (eds.). American Institute of Physics Inc., p. 1-12 12 p. 060001. (AIP Conference Proceedings; vol. 2192).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  20. Reconstructing Genotypes in Private Genomic Databases from Genetic Risk Scores

    Paige, B., Bell, J., Bellet, A., Gascon, A. & Ezer, D., 21 Apr 2020, Lecture Notes in Computer Science : International Conference on Research in Computational Molecular Biology. Vol. 12074. 23 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  21. The Nuclear Astrophysics program at n-TOF (CERN)

    Colonna, N., Aberle, O., Andrzejewski, J., Audouin, L., Bacak, M., Balibrea-Correa, J., Barbagallo, M., Bečvář, F., Berthoumieux, E., Billowes, J., Bosnar, D., Brown, A., Caamaño, M., Calviño, F., Calviani, M., Cano-Ott, D., Cardella, R., Casanovas, A., Cerutti, F., Chen, Y. H. & 31 others, Chiaveri, E., Clai, G., Cortés, G., Cortés-Giraldo, M. A., Cosentino, L., Cristallo, S., Damone, L. A., Diakaki, M., Domingo-Pardo, C., Dressler, L. R., Dupont, E., Durán, I., Fernández-Domínguez, B., Ferrari, A. C., Ferreira, P. R., Finocchiaro, P., Furman, V., Göbel, K., García, A. R., Gawlik, A., Gilardoni, S., Glodariu, T., Gonçalves, I. F., González-Romero, E., Griesmayer, E., Guerrero, C., Gunsing, F., Harada, H., Jenkins, D. G., Wright, T. & The n-TOF Collaboration, 30 Dec 2017, Nuclear Physics in Astrophysics VIII, NPA8 2017. EDP Sciences, Vol. 165. 8 p. 01014

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  22. Chapter › Research
  23. Local termination criteria for Swarm Intelligence: a comparison between local Stochastic Diffusion Search and ant nest-site selection

    Martin, A. O., Bishop, J. M., Robinson, E. J. H. & Myatt, D. R., 18 Dec 2018, Transactions on Computational Collective Intelligence. Berlin, Heidelberg: Springer-Verlag, Vol. XXXII. p. 140-166 27 p. (Lecture Notes in Computer Science).

    Research output: Chapter in Book/Report/Conference proceedingChapter

  24. Other contribution › Research
  25. Dryland nature based solutions for informal settlement upgrading schemes in Africa

    Thorn, J. P. R., Hejnowicz, A. P., Marchant, R., Ajala, O. A., Delgado, G., Shackleton, S., Kavonic, J. & Cinderby, S., 1 Feb 2021, 10 p. ICLEI Africa.

    Research output: Other contribution

  26. Socially inclusive and innovative policy making for climate resilient urban strategies for informal settlements in dryland Africa

    Thorn, J. P. R., Hejnowicz, A. P., Kavonic, J., Marchant, R., Shackleton, S., Delgado, G., Ajala, O. A., Mueller, A. & Cinderby, S., 1 Feb 2021, 10 p. ICLEI Africa.

    Research output: Other contribution

  27. Other › Research › Peer-reviewed
  28. Ionic modulation of immune checkpoint proteins

    Shandell, M. A., Lawrence, S., Brackenbury, W. & Lagos, D., 19 Jun 2019, p. Proc Physiol Soc 43, C044.

    Research output: Contribution to conferenceOtherpeer-review

  29. Poster › Research › Peer-reviewed
  30. Healthcare provisioning in evolutionary context

    Spikins, P., Needham, A., Wright, B. J. D., Dytham, C. & Hitchens, G. E., 15 Sep 2018.

    Research output: Contribution to conferencePosterpeer-review

  31. Molecular tools to engineer cyanobacteria for industrial biotechnology

    Madsen et al. , 2017.

    Research output: Contribution to conferencePosterpeer-review

  32. Poster › Research › Not peer-reviewed
  33. Interaction of LRRK2 with Rab GTPases in vivo - York

    Petridi, S., Middleton, A., Fellgett, A., Covill, L. E., Stewart, A., Munns, J., Kohrs, F., Hiesinger, R., Chawla, S. & Elliott, C. J. H., 13 Nov 2018.

    Research output: Contribution to conferencePoster

  34. Interaction of LRRK2-G2019S with Rab GTPases in vivo

    Elliott, C. J. H., Chawla, S., Hiesinger, R., Kohrs, F., Stewart, A., Covill, L. E., Fellgett, A., Middleton, A. & Petridi, S., 4 Sep 2018.

    Research output: Contribution to conferencePoster

  35. Paper › Research › Not peer-reviewed
  36. Innovative Science: The London Times, Letter to the Editor

    Leake, M. C., 2015.

    Research output: Contribution to conferencePaper

  37. Other report › Research
  38. A question of balance: lone parents, childcare and work

    Bell, A., Finch, N., Valle, I., Sainsbury, R. & Skinner, C., 2005, Leeds: Corporate Document Services. (DWP Research Summary; vol. 230)

    Research output: Book/ReportOther report

  39. Commissioned report › Research
  40. A Question of Balance: Lone parents, childcare and work

    Bell, A., Finch, N., Valle, I., Sainsbury, R. & Skinner, C., 2005, Leeds: Corporate Document Services. (Department for Work and Pensions Research Report)

    Research output: Book/ReportCommissioned report

  41. Editorial › Research › Peer-reviewed
  42. Editorial › Research › Not peer-reviewed
  43. Literature review › Research › Peer-reviewed
  44. Biodiversity and ecosystem function in soil

    Fitter, A. H., Gilligan, C. A., Hollingworth, K., Kleczkowski, A., Twyman, R. M., Pitchford, J. W. & NERC Soil Biodiversity Programme, Jun 2005

    Literature review in Functional Ecology

  45. Challenges in microbial ecology: building predictive understanding of community function and dynamics

    Chong, J. P. J., Widder, S., Allen, R. J., Pfeiffer, T., Curtis, T. P., Wiuf, C., Sloan, W. T., Cordero, O. X., Brown, S. P., Momeni, B., Shou, W., Kettle, H., Flint, H. J., Haas, A. F., Laroche, B., Kreft, J-U., Rainey, P. B., Freilich, S., Schuster, S., Milferstedt, K. & 11 others, van der Meer, J. R., Grosskopf, T., Huisman, J., Free, A., Picioreanu, C., Quince, C., Klapper, I., Labarthe, S., Smets, B. F., Wang, H. & Soyer, O. S., 29 Mar 2016

    Literature review in The ISME Journal

  46. Book/Film/Article review › Research › Peer-reviewed
  47. Book/Film/Article review › Research › Not peer-reviewed
  48. Comment/debate › Research › Peer-reviewed
  49. Author Correction: The dental proteome of Homo antecessor (Nature, (2020), 580, 7802, (235-238), 10.1038/s41586-020-2153-8)

    Welker, F., Ramos-Madrigal, J., Gutenbrunner, P., Mackie, M., Tiwary, S., Jersie-Christensen, R. R., Chiva, C., Dickinson, M. R., Kuhlwilm, M., de Manuel, M., Gelabert, P., Martinón-Torres, M., Margvelashvili, A., Arsuaga, J. L., Carbonell, E., Marques-Bonet, T., Penkman, K., Sabidó, E., Cox, J., Olsen, J. V. & 6 others, Lordkipanidze, D., Racimo, F., Lalueza-Fox, C., de Castro, J. M. B., Willerslev, E. & Cappellini, E., 29 Jul 2020

    Comment/debate in Nature

  50. Comment/debate › Research › Not peer-reviewed
  51. Untapped resources for medical research

    Perez-Escobar, O. A., Richardson, J. E., Howes, M-J. R., Lucas, E., Alvarez de Roman, N., Collemare, J., Graham, I. A., Gratzfeld, J., Kersey, P. J., Leitch, I. J., Paton, A., Hollingsworth, P. J. & Antonelli, A., 14 Aug 2020

    Comment/debate in Science

  52. Letter › Research › Peer-reviewed
  53. Can Habitat Management Mitigate Disease Impacts on Threatened Amphibians?

    Heard, G. W., Scroggie, M. P., Ramsey, D. S. L., Clemann, N., Hodgson, J. A. & Thomas, C. D., 15 Apr 2018

    Letter in Conservation Letters

  54. PCR-based detection of mobile genetic elements in total community DNA

    Smalla, K., Krogerrecklenfort, E., Heuer, H., Dejonghe, W., Top, E., Osborn, M., Niewint, J., Tebbe, C., Barr, M., Bailey, M., Greated, A., Thomas, C., Turner, S., Young, J. P. W., Nikolakopoulou, D., Karagouni, A., Wolters, A., Dirk Van Elsas, J., Dronen, K., Sandaa, R. & 4 others, Borin, S., Brabhu, J., Grohmann, E. & Sobecky, P., Jun 2000

    Letter in Microbiology

  55. Pyrodiversity interacts with rainfall to increase bird and mammal richness in African savannas

    Beale, C. M., Courtney-Mustaphi, C. J., Morrison, T. A., Archibald, S., Anderson, T. M., Dobson, A. P., Donaldson, J. E., Hempson, G. P., Probert, J. & Parr, C. L., 1 Apr 2018

    Letter in Ecology Letters

  56. Article › Research › Peer-reviewed
  57. 'Palaeoshellomics' reveals the use of freshwater mother-of-pearl in prehistory

    Sakalauskaite, J., Andersen, S. H., Biagi, P., Borrello, M. A., Cocquerez, T., Colonese, A. C., Dal Bello, F., Girod, A., Heumüller, M., Koon, H., Mandili, G., Medana, C., Penkman, K. E., Plasseraud, L., Schlichtherle, H., Taylor, S., Tokarski, C., Thomas, J., Wilson, J., Marin, F. & 1 others, Demarchi, B., 7 May 2019

    Article in eLife

  58. A Brassica napus Reductase Gene Dissected by Associative Transcriptomics Enhances Plant Adaption to Freezing Stress

    Huang, Y., Hussain, M. A., Luo, D., Xu, H., Zeng, C., Havlickova, L., Bancroft, I., Tian, Z., Zhang, X., Cheng, Y., Zou, X., Lu, G. & Lv, Y., 26 Jun 2020

    Article in Frontiers in Plant Science

  59. A DiCre recombinase-based system for inducible expression in Leishmania major

    Santos, R. E. R. S., Silva, G. L. A., Santos, E. V., Duncan, S. M., Mottram, J. C., Damasceno, J. D. & Tosi, L. R. O., 1 Sep 2017

    Article in MOLECULAR AND BIOCHEMICAL PARASITOLOGY

  60. A HIF–LIMD1 negative feedback mechanism mitigates the pro‐tumorigenic effects of hypoxia

    Bridge, K., Foxler, D. E., Foster, J. G., Grevitt, P., Curry, S., Shah, K. M., Davidson, K. M., Nagano, A., Gadaleta, E., Rhys, H. I., Kennedy, P. T., Hermida, M. A., Chang, T-Y., Shaw, P. E., Reynolds, L. E., McKay, T. R., Wang, H-W., Ribeiro, P. S., Plevin, M. J., Lagos, D. & 7 others, Lemoine, N. R., Rajan, P., Graham, T. A., Chelala, C., Hodivala-Dilke, K. M., Spendlove, I. & Sharp, T. V., 1 Aug 2018

    Article in EMBO Molecular Medicine

  61. A Leishmania infantum genetic marker associated with miltefosine treatment failure for visceral leishmaniasis

    Mottram, J. C., Jeffares, D., Brambilla Carnielli Trindade, J., Crouch, K., Forrester, S. J., Costa Silva, V., Carvalho, S. F. G., Damasceno, J. D., Brown, E., Dickens, N. J., Costa, D. L., Costa, C. H. N. & Dietze, R., 27 Sep 2018

    Article in EBioMedicine

  62. A Modest Addendum to the English Sediment Core Meta-Database

    Woodhouse, E. L., Ratcliffe, J. L., Andersen, R., Suggitt, A., Maclean, I. & Payne, R. J., 20 Feb 2017

    Article in Open Quaternary

  63. A New Chicken Genome Assembly Provides Insight into Avian Genome Structure

    Warren, W. C., Hillier, L. W., Tomlinson, C., Minx, P., Kremitzki, M., Graves, T., Markovic, C., Bouk, N., Pruitt, K. D., Thibaud-Nissen, F., Schneider, V., Mansour, T. A., Brown, C. T., Zimin, A., Hawken, R., Abrahamsen, M., Pyrkosz, A. B., Morisson, M., Fillon, V., Vignal, A. & 12 others, Chow, W., Howe, K., Fulton, J. E., Miller, M. M., Lovell, P., Mello, C. V., Wirthlin, M., Mason, A. S., Kuo, R., Burt, D. W., Dodgson, J. B. & Cheng, H. H., 5 Jan 2017

    Article in G3: Genes, Genomes, Genetics

  64. A Plant-Feeding Nematode Indirectly Increases the Fitness of an Aphid

    Hoysted, G. A., Lilley, C. J., Field, K. J., Dickinson, M., Hartley, S. E. & Unwin, P. E., 3 Nov 2017

    Article in Frontiers in Plant Science

  65. A Salmochelin S4-inspired Ciprofloxacin Trojan Horse Conjugate

    Sanderson, T., Black, C., Southwell, J., Wilde, E., Pandey, A., Herman, R., Thomas, G. H., Boros, E., Duhme-Klair, A. K. & Routledge, A., 11 Sep 2020

    Article in ACS Infectious Diseases

  66. A Simple Threshold Rule Is Sufficient to Explain Sophisticated Collective Decision-Making

    Robinson, E. J. H., Franks, N. R., Ellis, S., Okuda, S. & Marshall, J. A. R., 24 May 2011

    Article in PLoS ONE

  67. A Spotlight on Rad52 in Cyanidiophytina (Rhodophyta): A Relic in Algal Heritage

    Del Mondo, A., Iovinella, M., Petriccione, M., Nunziata, A., Davis, S. J., Cioppa, D. & Ciniglia, C., 19 Feb 2019

    Article in Plants

  68. A cycle of ubiquitination regulates adaptor function of the Nedd4-family ubiquitin ligase Rsp5

    MacDonald, C., Shields, S. B., Williams, C. A., Winistorfer, S. & Piper, R. C., 3 Feb 2020

    Article in Current Biology

  69. A defined mechanistic correlate of protection against Plasmodium falciparum malaria in non-human primates.

    Douglas, A. D., Baldeviano, G. C., Jin, J., Miura, K., Diouf, A., Zenonos, Z. A., Ventocilla, J. A., Silk, S. E., Marshall, J. M., Alanine, D. G. W., Wang, C., Edwards, N. J., Leiva, K. P., Gomez-Puerta, L. A., Lucas, C. M., Wright, G. J., Long, C. A., Royal, J. M. & Draper, S. J., 26 Apr 2019

    Article in Nature Communications

  70. A high-contiguity Brassica nigra genome localizes active centromeres and defines the ancestral Brassica genome

    Sampath, P., Koh, C. S., Jin, L., Buchwaldt, M., Higgins, E. E., Zheng, C., Sankoff, D., Robinson, S. J., Kagale, S., Navabi, Z-K., Tang, L., Horner, K. N., He, Z., Bancroft, I., Chalhoub, B., Sharpe, A. G. & Parkin, I. A. P., 10 Aug 2020

    Article in Nature Plants

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